RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.91■□□□□ 0.46
TRIM4-201ENST00000349062 EID1Q9Y6B2 187 aa17.91■□□□□ 0.46
TRIM4-201ENST00000349062 PREX1Q8TCU6 1659 aa17.91■□□□□ 0.46
TRIM4-201ENST00000349062 TMPOP42166 694 aaKnown RBP17.91■□□□□ 0.46
TRIM4-201ENST00000349062 COG3Q96JB2 828 aa17.9■□□□□ 0.46
TRIM4-201ENST00000349062 DCTN1Q14203 1278 aa17.9■□□□□ 0.46
TRIM4-201ENST00000349062 A2ML1A8K2U0 1454 aa17.9■□□□□ 0.46
TRIM4-201ENST00000349062 NKTRP30414 1462 aaKnown RBP17.89■□□□□ 0.45
TRIM4-201ENST00000349062 RLBP1P12271 317 aa17.89■□□□□ 0.45
TRIM4-201ENST00000349062 POLKQ9UBT6 870 aa17.89■□□□□ 0.45
TRIM4-201ENST00000349062 SLC4A3P48751 1232 aa17.89■□□□□ 0.45
TRIM4-201ENST00000349062 SETBP1Q9Y6X0 1596 aa17.89■□□□□ 0.45
TRIM4-201ENST00000349062 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
TRIM4-201ENST00000349062 PHACTR3Q96KR7 559 aa17.88■□□□□ 0.45
TRIM4-201ENST00000349062 ALKQ9UM73 1620 aa17.88■□□□□ 0.45
TRIM4-201ENST00000349062 RARSP54136 660 aaKnown RBP17.88■□□□□ 0.45
TRIM4-201ENST00000349062 MYH16Q9H6N6 1097 aa17.88■□□□□ 0.45
TRIM4-201ENST00000349062 CCDC61Q9Y6R9 512 aa17.88■□□□□ 0.45
TRIM4-201ENST00000349062 NGDNQ8NEJ9 315 aaKnown RBP17.87■□□□□ 0.45
TRIM4-201ENST00000349062 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
TRIM4-201ENST00000349062 IGHDP01880 384 aa17.87■□□□□ 0.45
TRIM4-201ENST00000349062 LTV1Q96GA3 475 aaPredicted RBP17.87■□□□□ 0.45
TRIM4-201ENST00000349062 PTPRMP28827 1452 aa17.87■□□□□ 0.45
TRIM4-201ENST00000349062 PRKCSHP14314 528 aaPredicted RBP17.87■□□□□ 0.45
TRIM4-201ENST00000349062 FAM83GA6ND36 823 aa17.86■□□□□ 0.45
TRIM4-201ENST00000349062 AMOTL2Q9Y2J4 779 aa17.86■□□□□ 0.45
TRIM4-201ENST00000349062 PPIP5K1Q6PFW1 1433 aa17.86■□□□□ 0.45
TRIM4-201ENST00000349062 ABCC11Q96J66 1382 aa17.85■□□□□ 0.45
TRIM4-201ENST00000349062 ITPRIPQ8IWB1 547 aa17.85■□□□□ 0.45
TRIM4-201ENST00000349062 ARHGEF28Q8N1W1 1705 aaKnown RBP17.84■□□□□ 0.45
TRIM4-201ENST00000349062 LMOD2Q6P5Q4 547 aa17.84■□□□□ 0.45
TRIM4-201ENST00000349062 PPP6R1Q9UPN7 881 aa17.84■□□□□ 0.45
TRIM4-201ENST00000349062 TRMT2AQ8IZ69 625 aaKnown RBP17.83■□□□□ 0.45
TRIM4-201ENST00000349062 AEBP1Q8IUX7 1158 aa17.82■□□□□ 0.44
TRIM4-201ENST00000349062 PRR36Q9H6K5 1346 aa17.82■□□□□ 0.44
TRIM4-201ENST00000349062 TRIM35Q9UPQ4 493 aa17.82■□□□□ 0.44
TRIM4-201ENST00000349062 CENPQQ7L2Z9 268 aaPredicted RBP17.82■□□□□ 0.44
TRIM4-201ENST00000349062 ACEP12821 1306 aa17.81■□□□□ 0.44
TRIM4-201ENST00000349062 ZC3H13Q5T200 1668 aaKnown RBP17.81■□□□□ 0.44
TRIM4-201ENST00000349062 ROBO2Q9HCK4 1378 aa17.81■□□□□ 0.44
TRIM4-201ENST00000349062 SSH1Q8WYL5 1049 aa17.81■□□□□ 0.44
TRIM4-201ENST00000349062 NEURL4Q96JN8 1562 aa17.8■□□□□ 0.44
TRIM4-201ENST00000349062 WDR63Q8IWG1 891 aa17.8■□□□□ 0.44
TRIM4-201ENST00000349062 SULT6B1Q6IMI4 303 aa17.8■□□□□ 0.44
TRIM4-201ENST00000349062 ZFYVE9O95405 1425 aa17.8■□□□□ 0.44
TRIM4-201ENST00000349062 BACH2Q9BYV9 841 aa17.79■□□□□ 0.44
TRIM4-201ENST00000349062 HSP90AB2PQ58FF8 381 aa17.79■□□□□ 0.44
TRIM4-201ENST00000349062 DAXXQ9UER7 740 aaPredicted RBP17.79■□□□□ 0.44
TRIM4-201ENST00000349062 NOB1Q9ULX3 412 aaKnown RBP17.79■□□□□ 0.44
TRIM4-201ENST00000349062 TMEM2Q9UHN6 1383 aa17.78■□□□□ 0.44
TRIM4-201ENST00000349062 XPCQ01831 940 aaPredicted RBP17.78■□□□□ 0.44
TRIM4-201ENST00000349062 MIS18AQ9NYP9 233 aa17.78■□□□□ 0.44
TRIM4-201ENST00000349062 PCDHB15Q9Y5E8 787 aa17.78■□□□□ 0.44
TRIM4-201ENST00000349062 PUS7Q96PZ0 661 aaKnown RBP17.77■□□□□ 0.44
TRIM4-201ENST00000349062 PLEKHF1Q96S99 279 aa17.77■□□□□ 0.44
TRIM4-201ENST00000349062 INSRP06213 1382 aa17.77■□□□□ 0.44
TRIM4-201ENST00000349062 MYO3AQ8NEV4 1616 aa17.77■□□□□ 0.44
TRIM4-201ENST00000349062 NSD2O96028 1365 aa17.77■□□□□ 0.43
TRIM4-201ENST00000349062 ZKSCAN2Q63HK3 967 aa17.77■□□□□ 0.43
TRIM4-201ENST00000349062 C1orf115Q9H7X2 142 aa17.76■□□□□ 0.43
TRIM4-201ENST00000349062 DZIP1LQ8IYY4 767 aaKnown RBP17.76■□□□□ 0.43
TRIM4-201ENST00000349062 TSPYL6Q8N831 410 aa17.75■□□□□ 0.43
TRIM4-201ENST00000349062 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
TRIM4-201ENST00000349062 EIF5BO60841 1220 aaKnown RBP17.75■□□□□ 0.43
TRIM4-201ENST00000349062 KRT24Q2M2I5 525 aa17.75■□□□□ 0.43
TRIM4-201ENST00000349062 MCM10Q7L590 875 aa17.75■□□□□ 0.43
TRIM4-201ENST00000349062 KCNA6P17658 529 aa17.74■□□□□ 0.43
TRIM4-201ENST00000349062 AMPHP49418 695 aa17.74■□□□□ 0.43
TRIM4-201ENST00000349062 ARHGEF40Q8TER5 1519 aa17.74■□□□□ 0.43
TRIM4-201ENST00000349062 NLRP6P59044 892 aa17.74■□□□□ 0.43
TRIM4-201ENST00000349062 RSPH6AQ9H0K4 717 aa17.73■□□□□ 0.43
TRIM4-201ENST00000349062 FCHSD2O94868 740 aa17.73■□□□□ 0.43
TRIM4-201ENST00000349062 TRIM27P14373 513 aa17.73■□□□□ 0.43
TRIM4-201ENST00000349062 THEMISQ8N1K5 641 aaPredicted RBP17.73■□□□□ 0.43
TRIM4-201ENST00000349062 NECTIN2Q92692 538 aa17.73■□□□□ 0.43
TRIM4-201ENST00000349062 PDE3AQ14432 1141 aa17.73■□□□□ 0.43
TRIM4-201ENST00000349062 NGEFQ8N5V2 710 aa17.73■□□□□ 0.43
TRIM4-201ENST00000349062 NINLQ9Y2I6 1382 aa17.72■□□□□ 0.43
TRIM4-201ENST00000349062 KDM2BQ8NHM5 1336 aa17.72■□□□□ 0.43
TRIM4-201ENST00000349062 PNNQ9H307 717 aaKnown RBP17.72■□□□□ 0.43
TRIM4-201ENST00000349062 TTC21BQ7Z4L5 1316 aa17.71■□□□□ 0.43
TRIM4-201ENST00000349062 TMEM57Q8N5G2 664 aa17.71■□□□□ 0.43
TRIM4-201ENST00000349062 APBB1O00213 710 aa17.7■□□□□ 0.42
TRIM4-201ENST00000349062 FOXO3O43524 673 aa17.7■□□□□ 0.42
TRIM4-201ENST00000349062 KIF13AQ9H1H9 1805 aa17.7■□□□□ 0.42
TRIM4-201ENST00000349062 IL13P35225 146 aa17.7■□□□□ 0.42
TRIM4-201ENST00000349062 NFE2L2Q16236 605 aa17.7■□□□□ 0.42
TRIM4-201ENST00000349062 EIF4A2Q14240 407 aaKnown RBP17.69■□□□□ 0.42
TRIM4-201ENST00000349062 USHBP1Q8N6Y0 703 aa17.69■□□□□ 0.42
TRIM4-201ENST00000349062 AGLP35573 1532 aa17.68■□□□□ 0.42
TRIM4-201ENST00000349062 ABTB2Q8N961 1025 aa17.68■□□□□ 0.42
TRIM4-201ENST00000349062 ZNF692Q9BU19 519 aaPredicted RBP17.68■□□□□ 0.42
TRIM4-201ENST00000349062 PDZRN3Q9UPQ7 1066 aa17.68■□□□□ 0.42
TRIM4-201ENST00000349062 MS4A1P11836 297 aa17.67■□□□□ 0.42
TRIM4-201ENST00000349062 MVPQ14764 893 aaKnown RBP17.67■□□□□ 0.42
TRIM4-201ENST00000349062 CCDC27Q2M243 656 aa17.67■□□□□ 0.42
TRIM4-201ENST00000349062 FAM161AQ3B820 660 aa17.67■□□□□ 0.42
TRIM4-201ENST00000349062 PHF23Q9BUL5 403 aaPredicted RBP17.67■□□□□ 0.42
TRIM4-201ENST00000349062 MBIPQ9NS73 344 aa17.67■□□□□ 0.42
TRIM4-201ENST00000349062 SPATA31D1Q6ZQQ2 1576 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms