RNA–Protein interactions for RNA: ENST00000344979.7

PDE4A-202, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best) BASIC

Gene PDE4A, Length 2,579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-202ENST00000344979 HDGFL2Q7Z4V5 671 aaPredicted RBP23.38■■□□□ 1.33
PDE4A-202ENST00000344979 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.38■■□□□ 1.33
PDE4A-202ENST00000344979 PTPRMP28827 1452 aa23.38■■□□□ 1.33
PDE4A-202ENST00000344979 FBLN1P23142 703 aa23.38■■□□□ 1.33
PDE4A-202ENST00000344979 SSH1Q8WYL5 1049 aa23.37■■□□□ 1.33
PDE4A-202ENST00000344979 DIAPH1O60610 1272 aaKnown RBP23.36■■□□□ 1.33
PDE4A-202ENST00000344979 FRAT2O75474 233 aaPredicted RBP23.36■■□□□ 1.33
PDE4A-202ENST00000344979 ITPRIPQ8IWB1 547 aa23.36■■□□□ 1.33
PDE4A-202ENST00000344979 PRKCSHP14314 528 aaPredicted RBP23.35■■□□□ 1.33
PDE4A-202ENST00000344979 TRIM27P14373 513 aa23.35■■□□□ 1.33
PDE4A-202ENST00000344979 RICTORQ6R327 1708 aa23.34■■□□□ 1.33
PDE4A-202ENST00000344979 CYB5RLQ6IPT4 315 aa23.34■■□□□ 1.33
PDE4A-202ENST00000344979 ADGRB2O60241 1585 aa23.34■■□□□ 1.33
PDE4A-202ENST00000344979 NCBP3Q53F19 620 aaKnown RBP23.34■■□□□ 1.33
PDE4A-202ENST00000344979 GSE1Q14687 1217 aa23.33■■□□□ 1.33
PDE4A-202ENST00000344979 WAPLQ7Z5K2 1190 aa23.33■■□□□ 1.33
PDE4A-202ENST00000344979 TMEM131LA2VDJ0 1609 aa23.33■■□□□ 1.33
PDE4A-202ENST00000344979 CD163L1Q9NR16 1453 aa23.33■■□□□ 1.32
PDE4A-202ENST00000344979 NOB1Q9ULX3 412 aaKnown RBP23.33■■□□□ 1.32
PDE4A-202ENST00000344979 UPF2Q9HAU5 1272 aaKnown RBP23.32■■□□□ 1.32
PDE4A-202ENST00000344979 COL3A1P02461 1466 aaPredicted RBP23.31■■□□□ 1.32
PDE4A-202ENST00000344979 CT47B1P0C2W7 299 aaPredicted RBP23.31■■□□□ 1.32
PDE4A-202ENST00000344979 PREX1Q8TCU6 1659 aa23.31■■□□□ 1.32
PDE4A-202ENST00000344979 IL27Q8NEV9 243 aa23.3■■□□□ 1.32
PDE4A-202ENST00000344979 ATF7IPQ6VMQ6 1270 aa23.3■■□□□ 1.32
PDE4A-202ENST00000344979 SLKQ9H2G2 1235 aaPredicted RBP23.3■■□□□ 1.32
PDE4A-202ENST00000344979 BECN1Q14457 450 aa23.29■■□□□ 1.32
PDE4A-202ENST00000344979 MLECQ14165 292 aa23.29■■□□□ 1.32
PDE4A-202ENST00000344979 NLRP1Q9C000 1473 aa23.28■■□□□ 1.32
PDE4A-202ENST00000344979 VIRMAQ69YN4 1812 aaKnown RBP23.28■■□□□ 1.32
PDE4A-202ENST00000344979 PRKAR2BP31323 418 aa23.27■■□□□ 1.32
PDE4A-202ENST00000344979 FAM69CQ0P6D2 419 aa23.27■■□□□ 1.32
PDE4A-202ENST00000344979 TMEM57Q8N5G2 664 aa23.26■■□□□ 1.31
PDE4A-202ENST00000344979 DDX19BQ9UMR2 479 aa23.26■■□□□ 1.31
PDE4A-202ENST00000344979 ALKQ9UM73 1620 aa23.26■■□□□ 1.31
PDE4A-202ENST00000344979 HMOX1P09601 288 aa23.26■■□□□ 1.31
PDE4A-202ENST00000344979 PNNQ9H307 717 aaKnown RBP23.25■■□□□ 1.31
PDE4A-202ENST00000344979 RTN4Q9NQC3 1192 aaKnown RBP23.25■■□□□ 1.31
PDE4A-202ENST00000344979 POLKQ9UBT6 870 aa23.24■■□□□ 1.31
PDE4A-202ENST00000344979 IL16Q14005 1332 aa23.24■■□□□ 1.31
PDE4A-202ENST00000344979 ARHGEF40Q8TER5 1519 aa23.23■■□□□ 1.31
PDE4A-202ENST00000344979 TBC1D32Q96NH3 1257 aa23.23■■□□□ 1.31
PDE4A-202ENST00000344979 FCHSD2O94868 740 aa23.22■■□□□ 1.31
PDE4A-202ENST00000344979 THUMPD2Q9BTF0 503 aaKnown RBP23.22■■□□□ 1.31
PDE4A-202ENST00000344979 MED14O60244 1454 aa23.22■■□□□ 1.31
PDE4A-202ENST00000344979 PNPLA6Q8IY17 1366 aa23.21■■□□□ 1.31
PDE4A-202ENST00000344979 PHACTR3Q96KR7 559 aa23.2■■□□□ 1.3
PDE4A-202ENST00000344979 RSPH6AQ9H0K4 717 aa23.2■■□□□ 1.3
PDE4A-202ENST00000344979 SPRYD3Q8NCJ5 442 aa23.2■■□□□ 1.3
PDE4A-202ENST00000344979 EMILIN1Q9Y6C2 1016 aa23.2■■□□□ 1.3
PDE4A-202ENST00000344979 IPO8O15397 1037 aaKnown RBP23.19■■□□□ 1.3
PDE4A-202ENST00000344979 MFAP1P55081 439 aaKnown RBP23.19■■□□□ 1.3
PDE4A-202ENST00000344979 HDAC1Q13547 482 aaPredicted RBP23.19■■□□□ 1.3
PDE4A-202ENST00000344979 KIF16BQ96L93 1317 aa23.19■■□□□ 1.3
PDE4A-202ENST00000344979 CLTCQ00610 1675 aaKnown RBP23.18■■□□□ 1.3
PDE4A-202ENST00000344979 ZRANB1Q9UGI0 708 aa23.18■■□□□ 1.3
PDE4A-202ENST00000344979 ANKRD26Q9UPS8 1709 aa23.17■■□□□ 1.3
PDE4A-202ENST00000344979 NME9Q86XW9 330 aa23.17■■□□□ 1.3
PDE4A-202ENST00000344979 ZBTB40Q9NUA8 1239 aa23.17■■□□□ 1.3
PDE4A-202ENST00000344979 BRPF3Q9ULD4 1205 aa23.17■■□□□ 1.3
PDE4A-202ENST00000344979 ELL2O00472 640 aaPredicted RBP23.17■■□□□ 1.3
PDE4A-202ENST00000344979 TBC1D2Q9BYX2 928 aa23.17■■□□□ 1.3
PDE4A-202ENST00000344979 LRRC7Q96NW7 1537 aa23.17■■□□□ 1.3
PDE4A-202ENST00000344979 ZMYM3Q14202 1370 aa23.16■■□□□ 1.3
PDE4A-202ENST00000344979 TXNDC2Q86VQ3 553 aa23.15■■□□□ 1.3
PDE4A-202ENST00000344979 NCKAP5LQ9HCH0 1330 aa23.15■■□□□ 1.3
PDE4A-202ENST00000344979 RIMS2Q9UQ26 1411 aa23.15■■□□□ 1.3
PDE4A-202ENST00000344979 NFE2L2Q16236 605 aa23.13■■□□□ 1.29
PDE4A-202ENST00000344979 ALDH1L2Q3SY69 923 aa23.13■■□□□ 1.29
PDE4A-202ENST00000344979 C22orf23Q9BZE7 217 aa23.13■■□□□ 1.29
PDE4A-202ENST00000344979 LNPKQ9C0E8 428 aa23.13■■□□□ 1.29
PDE4A-202ENST00000344979 A2ML1A8K2U0 1454 aa23.13■■□□□ 1.29
PDE4A-202ENST00000344979 KIF20BQ96Q89 1820 aa23.13■■□□□ 1.29
PDE4A-202ENST00000344979 SMC5Q8IY18 1101 aa23.12■■□□□ 1.29
PDE4A-202ENST00000344979 FAM135BQ49AJ0 1406 aa23.12■■□□□ 1.29
PDE4A-202ENST00000344979 TSPYL6Q8N831 410 aa23.12■■□□□ 1.29
PDE4A-202ENST00000344979 WASLO00401 505 aaPredicted RBP23.11■■□□□ 1.29
PDE4A-202ENST00000344979 RRS1Q15050 365 aaKnown RBP23.11■■□□□ 1.29
PDE4A-202ENST00000344979 C1orf115Q9H7X2 142 aa23.11■■□□□ 1.29
PDE4A-202ENST00000344979 PPIP5K1Q6PFW1 1433 aa23.1■■□□□ 1.29
PDE4A-202ENST00000344979 TSPOAP1O95153 1857 aa23.1■■□□□ 1.29
PDE4A-202ENST00000344979 ANTXR1Q9H6X2 564 aa23.09■■□□□ 1.29
PDE4A-202ENST00000344979 ATP7BP35670 1465 aa23.09■■□□□ 1.29
PDE4A-202ENST00000344979 IL13P35225 146 aa23.08■■□□□ 1.29
PDE4A-202ENST00000344979 VAMP4O75379 141 aa23.08■■□□□ 1.29
PDE4A-202ENST00000344979 NUDT16Q96DE0 195 aaKnown RBP23.08■■□□□ 1.29
PDE4A-202ENST00000344979 METP08581 1390 aa23.08■■□□□ 1.28
PDE4A-202ENST00000344979 COG3Q96JB2 828 aa23.07■■□□□ 1.28
PDE4A-202ENST00000344979 MBIPQ9NS73 344 aa23.07■■□□□ 1.28
PDE4A-202ENST00000344979 NUCB1Q02818 461 aa23.06■■□□□ 1.28
PDE4A-202ENST00000344979 FAM83GA6ND36 823 aa23.06■■□□□ 1.28
PDE4A-202ENST00000344979 GNAI1P63096 354 aa23.05■■□□□ 1.28
PDE4A-202ENST00000344979 MRPL50Q8N5N7 158 aaKnown RBP23.05■■□□□ 1.28
PDE4A-202ENST00000344979 ESF1Q9H501 851 aaKnown RBP23.05■■□□□ 1.28
PDE4A-202ENST00000344979 CALD1Q05682 793 aaKnown RBP23.05■■□□□ 1.28
PDE4A-202ENST00000344979 CHD1LQ86WJ1 897 aa23.05■■□□□ 1.28
PDE4A-202ENST00000344979 MAP2P11137 1827 aaKnown RBP23.05■■□□□ 1.28
PDE4A-202ENST00000344979 DCTN1Q14203 1278 aa23.04■■□□□ 1.28
PDE4A-202ENST00000344979 ANKRD45Q5TZF3 282 aa23.04■■□□□ 1.28
PDE4A-202ENST00000344979 EDC4Q6P2E9 1401 aaKnown RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms