RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 RBM33Q96EV2 1170 aaKnown RBP13.45□□□□□ -0.26
CAPRIN1-201ENST00000341394 NUDCQ9Y266 331 aa13.45□□□□□ -0.26
CAPRIN1-201ENST00000341394 FBLN1P23142 703 aa13.45□□□□□ -0.26
CAPRIN1-201ENST00000341394 ANP32BQ92688 251 aaKnown RBP13.44□□□□□ -0.26
CAPRIN1-201ENST00000341394 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
CAPRIN1-201ENST00000341394 ANKRD36BQ8N2N9 1353 aa13.44□□□□□ -0.26
CAPRIN1-201ENST00000341394 TECPR2O15040 1411 aa13.44□□□□□ -0.26
CAPRIN1-201ENST00000341394 CGNL1Q0VF96 1302 aa13.44□□□□□ -0.26
CAPRIN1-201ENST00000341394 ZBED9Q6R2W3 1325 aa13.44□□□□□ -0.26
CAPRIN1-201ENST00000341394 ADAMTS8Q9UP79 889 aa13.44□□□□□ -0.26
CAPRIN1-201ENST00000341394 PRR36Q9H6K5 1346 aa13.43□□□□□ -0.26
CAPRIN1-201ENST00000341394 TRIM44Q96DX7 344 aaPredicted RBP13.43□□□□□ -0.26
CAPRIN1-201ENST00000341394 TBX22Q9Y458 520 aa13.43□□□□□ -0.26
CAPRIN1-201ENST00000341394 SETD1BQ9UPS6 1966 aaKnown RBP13.43□□□□□ -0.26
CAPRIN1-201ENST00000341394 APBB1O00213 710 aa13.42□□□□□ -0.26
CAPRIN1-201ENST00000341394 WASLO00401 505 aaPredicted RBP13.42□□□□□ -0.26
CAPRIN1-201ENST00000341394 GGNBP2Q9H3C7 697 aa13.42□□□□□ -0.26
CAPRIN1-201ENST00000341394 CDCA7LQ96GN5 454 aa13.42□□□□□ -0.26
CAPRIN1-201ENST00000341394 NPC1L1Q9UHC9 1359 aa13.42□□□□□ -0.26
CAPRIN1-201ENST00000341394 ZNF142P52746 1687 aaPredicted RBP13.42□□□□□ -0.26
CAPRIN1-201ENST00000341394 ATAD2Q6PL18 1390 aa13.41□□□□□ -0.26
CAPRIN1-201ENST00000341394 NUDT16Q96DE0 195 aaKnown RBP13.41□□□□□ -0.26
CAPRIN1-201ENST00000341394 USP32Q8NFA0 1604 aa13.41□□□□□ -0.26
CAPRIN1-201ENST00000341394 SHPRHQ149N8 1683 aa13.41□□□□□ -0.26
CAPRIN1-201ENST00000341394 HSPA2P54652 639 aa13.41□□□□□ -0.26
CAPRIN1-201ENST00000341394 RRP7AQ9Y3A4 280 aaKnown RBP13.41□□□□□ -0.26
CAPRIN1-201ENST00000341394 BECN1Q14457 450 aa13.4□□□□□ -0.26
CAPRIN1-201ENST00000341394 NGDNQ8NEJ9 315 aaKnown RBP13.4□□□□□ -0.26
CAPRIN1-201ENST00000341394 CRBNQ96SW2 442 aa13.4□□□□□ -0.26
CAPRIN1-201ENST00000341394 FANCIQ9NVI1 1328 aa13.4□□□□□ -0.26
CAPRIN1-201ENST00000341394 ZRANB1Q9UGI0 708 aa13.4□□□□□ -0.26
CAPRIN1-201ENST00000341394 TAOK2Q9UL54 1235 aa13.4□□□□□ -0.26
CAPRIN1-201ENST00000341394 SOX12O15370 315 aa13.39□□□□□ -0.27
CAPRIN1-201ENST00000341394 ERICH6BQ5W0A0 696 aa13.39□□□□□ -0.27
CAPRIN1-201ENST00000341394 CFAP53Q96M91 514 aa13.39□□□□□ -0.27
CAPRIN1-201ENST00000341394 ATP7BP35670 1465 aa13.39□□□□□ -0.27
CAPRIN1-201ENST00000341394 KCNA6P17658 529 aa13.39□□□□□ -0.27
CAPRIN1-201ENST00000341394 CCDC61Q9Y6R9 512 aa13.39□□□□□ -0.27
CAPRIN1-201ENST00000341394 FYB1O15117 783 aa13.39□□□□□ -0.27
CAPRIN1-201ENST00000341394 PLCB2Q00722 1185 aa13.39□□□□□ -0.27
CAPRIN1-201ENST00000341394 FAM135BQ49AJ0 1406 aa13.39□□□□□ -0.27
CAPRIN1-201ENST00000341394 U2SURPO15042 1029 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-201ENST00000341394 GLIPR1L2Q4G1C9 344 aa13.38□□□□□ -0.27
CAPRIN1-201ENST00000341394 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
CAPRIN1-201ENST00000341394 XRN1Q8IZH2 1706 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-201ENST00000341394 FTSJ3Q8IY81 847 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-201ENST00000341394 PPIP5K1Q6PFW1 1433 aa13.38□□□□□ -0.27
CAPRIN1-201ENST00000341394 NKTRP30414 1462 aaKnown RBP13.38□□□□□ -0.27
CAPRIN1-201ENST00000341394 BLMP54132 1417 aaPredicted RBP13.37□□□□□ -0.27
CAPRIN1-201ENST00000341394 KIF20BQ96Q89 1820 aa13.37□□□□□ -0.27
CAPRIN1-201ENST00000341394 PUS7Q96PZ0 661 aaKnown RBP13.37□□□□□ -0.27
CAPRIN1-201ENST00000341394 PROSER2Q86WR7 435 aaPredicted RBP13.37□□□□□ -0.27
CAPRIN1-201ENST00000341394 MTHFSP49914 203 aa13.36□□□□□ -0.27
CAPRIN1-201ENST00000341394 ANKRD26Q9UPS8 1709 aa13.36□□□□□ -0.27
CAPRIN1-201ENST00000341394 CHD2O14647 1828 aaKnown RBP13.35□□□□□ -0.27
CAPRIN1-201ENST00000341394 AKAP12Q02952 1782 aa13.34□□□□□ -0.27
CAPRIN1-201ENST00000341394 LMOD2Q6P5Q4 547 aa13.34□□□□□ -0.27
CAPRIN1-201ENST00000341394 TOPAZ1Q8N9V7 1692 aa13.34□□□□□ -0.27
CAPRIN1-201ENST00000341394 CPSF1Q10570 1443 aaKnown RBP13.34□□□□□ -0.27
CAPRIN1-201ENST00000341394 ADGRB2O60241 1585 aa13.34□□□□□ -0.27
CAPRIN1-201ENST00000341394 MON2Q7Z3U7 1717 aa13.34□□□□□ -0.27
CAPRIN1-201ENST00000341394 NME9Q86XW9 330 aa13.34□□□□□ -0.27
CAPRIN1-201ENST00000341394 MAP2P11137 1827 aaKnown RBP13.34□□□□□ -0.27
CAPRIN1-201ENST00000341394 NALCNQ8IZF0 1738 aa13.33□□□□□ -0.28
CAPRIN1-201ENST00000341394 MFAP1P55081 439 aaKnown RBP13.33□□□□□ -0.28
CAPRIN1-201ENST00000341394 SIRT1Q96EB6 747 aa13.33□□□□□ -0.28
CAPRIN1-201ENST00000341394 TCERG1O14776 1098 aaKnown RBP13.32□□□□□ -0.28
CAPRIN1-201ENST00000341394 ITSN1Q15811 1721 aa13.32□□□□□ -0.28
CAPRIN1-201ENST00000341394 CDC42BPGQ6DT37 1551 aa13.32□□□□□ -0.28
CAPRIN1-201ENST00000341394 DMRT2Q9Y5R5 561 aa13.32□□□□□ -0.28
CAPRIN1-201ENST00000341394 DIP2AQ14689 1571 aa13.32□□□□□ -0.28
CAPRIN1-201ENST00000341394 COG3Q96JB2 828 aa13.32□□□□□ -0.28
CAPRIN1-201ENST00000341394 NINLQ9Y2I6 1382 aa13.31□□□□□ -0.28
CAPRIN1-201ENST00000341394 PTCH1Q13635 1447 aa13.31□□□□□ -0.28
CAPRIN1-201ENST00000341394 U2AF1L5P0DN76 240 aaPredicted RBP13.31□□□□□ -0.28
CAPRIN1-201ENST00000341394 RRP1P56182 461 aaKnown RBP13.31□□□□□ -0.28
CAPRIN1-201ENST00000341394 U2AF1Q01081 240 aaKnown RBP eCLIP13.31□□□□□ -0.28
CAPRIN1-201ENST00000341394 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
CAPRIN1-201ENST00000341394 DNTTIP2Q5QJE6 756 aaKnown RBP13.3□□□□□ -0.28
CAPRIN1-201ENST00000341394 FOXD4L5Q5VV16 416 aaPredicted RBP13.3□□□□□ -0.28
CAPRIN1-201ENST00000341394 FOXD4L4Q8WXT5 416 aaPredicted RBP13.3□□□□□ -0.28
CAPRIN1-201ENST00000341394 GSE1Q14687 1217 aa13.3□□□□□ -0.28
CAPRIN1-201ENST00000341394 NRKQ7Z2Y5 1582 aa13.3□□□□□ -0.28
CAPRIN1-201ENST00000341394 ESCO1Q5FWF5 840 aa13.3□□□□□ -0.28
CAPRIN1-201ENST00000341394 SPINK5Q9NQ38 1064 aaPredicted RBP13.3□□□□□ -0.28
CAPRIN1-201ENST00000341394 POLR3AO14802 1390 aaPredicted RBP13.3□□□□□ -0.28
CAPRIN1-201ENST00000341394 KDM4FA0A1W2PPD8 638 aa13.29□□□□□ -0.28
CAPRIN1-201ENST00000341394 APAF1O14727 1248 aa13.29□□□□□ -0.28
CAPRIN1-201ENST00000341394 COG6Q9Y2V7 657 aa13.29□□□□□ -0.28
CAPRIN1-201ENST00000341394 ACEP12821 1306 aa13.29□□□□□ -0.28
CAPRIN1-201ENST00000341394 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
CAPRIN1-201ENST00000341394 FRAT2O75474 233 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-201ENST00000341394 NUTM2GQ5VZR2 741 aa13.28□□□□□ -0.28
CAPRIN1-201ENST00000341394 COL3A1P02461 1466 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-201ENST00000341394 FOXD4L6Q3SYB3 417 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-201ENST00000341394 FOXD4L3Q6VB84 417 aaPredicted RBP13.28□□□□□ -0.28
CAPRIN1-201ENST00000341394 HSP90AB1P08238 724 aaKnown RBP13.28□□□□□ -0.28
CAPRIN1-201ENST00000341394 STRCP1A6NGW2 1772 aa13.28□□□□□ -0.28
CAPRIN1-201ENST00000341394 NPHP4O75161 1426 aaPredicted RBP13.27□□□□□ -0.28
CAPRIN1-201ENST00000341394 NFKBIBQ15653 356 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms