RNA–Protein interactions for RNA: ENST00000340994.4

PKHD1-201, Transcript of PKHD1, fibrocystin/polyductin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PKHD1, Length 11,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1-201ENST00000340994 GOLGA6L9A6NEM1 432 aa9.74□□□□□ -0.85
PKHD1-201ENST00000340994 TUBB4BP68371 445 aa9.74□□□□□ -0.85
PKHD1-201ENST00000340994 IMMTQ16891 758 aaKnown RBP9.74□□□□□ -0.85
PKHD1-201ENST00000340994 GTPBP4Q9BZE4 634 aaKnown RBP9.74□□□□□ -0.85
PKHD1-201ENST00000340994 SYCP1Q15431 976 aa9.73□□□□□ -0.85
PKHD1-201ENST00000340994 SOGA1O94964 1423 aa9.73□□□□□ -0.85
PKHD1-201ENST00000340994 KIF21BO75037 1637 aa9.73□□□□□ -0.85
PKHD1-201ENST00000340994 NBPF1Q3BBV0 1214 aa9.73□□□□□ -0.85
PKHD1-201ENST00000340994 SSR1P43307 286 aaKnown RBP9.73□□□□□ -0.85
PKHD1-201ENST00000340994 SMTNL1A8MU46 457 aa9.73□□□□□ -0.85
PKHD1-201ENST00000340994 SERPINC1P01008 464 aa9.73□□□□□ -0.85
PKHD1-201ENST00000340994 L3MBTL2Q969R5 705 aa9.73□□□□□ -0.85
PKHD1-201ENST00000340994 SUPT6HQ7KZ85 1726 aaKnown RBP9.73□□□□□ -0.85
PKHD1-201ENST00000340994 BACH2Q9BYV9 841 aa9.73□□□□□ -0.85
PKHD1-201ENST00000340994 EVC2Q86UK5 1308 aa9.73□□□□□ -0.85
PKHD1-201ENST00000340994 DDX58O95786 925 aaKnown RBP9.73□□□□□ -0.85
PKHD1-201ENST00000340994 GIGYF2Q6Y7W6 1299 aaKnown RBP9.73□□□□□ -0.85
PKHD1-201ENST00000340994 SETSIPP0DME0 302 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 PDE3AQ14432 1141 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 STAC3Q96MF2 364 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 K7ELQ4 463 aaPredicted RBP9.72□□□□□ -0.85
PKHD1-201ENST00000340994 MEX3CQ5U5Q3 659 aaKnown RBP9.72□□□□□ -0.85
PKHD1-201ENST00000340994 SFPQP23246 707 aaKnown RBP eCLIP9.72□□□□□ -0.85
PKHD1-201ENST00000340994 CCDC83Q8IWF9 413 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 CENPHQ9H3R5 247 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 WASHC2AQ641Q2 1341 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 PPM1EQ8WY54 764 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 RUNDC1Q96C34 613 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 WASHC2CQ9Y4E1 1318 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 PAXBP1Q9Y5B6 917 aa9.72□□□□□ -0.85
PKHD1-201ENST00000340994 G3BP1Q13283 466 aaKnown RBP eCLIP9.72□□□□□ -0.85
PKHD1-201ENST00000340994 PRPF40AO75400 957 aaKnown RBP9.71□□□□□ -0.85
PKHD1-201ENST00000340994 GCC1Q96CN9 775 aa9.71□□□□□ -0.85
PKHD1-201ENST00000340994 PLIN1O60240 522 aa9.71□□□□□ -0.85
PKHD1-201ENST00000340994 PLEKHG5O94827 1062 aa9.71□□□□□ -0.85
PKHD1-201ENST00000340994 SPECC1LQ69YQ0 1117 aa9.71□□□□□ -0.85
PKHD1-201ENST00000340994 SMC1AQ14683 1233 aaKnown RBP9.71□□□□□ -0.85
PKHD1-201ENST00000340994 PTPN14Q15678 1187 aa9.71□□□□□ -0.86
PKHD1-201ENST00000340994 ARHGAP29Q52LW3 1261 aa9.71□□□□□ -0.86
PKHD1-201ENST00000340994 TUBB4AP04350 444 aa9.71□□□□□ -0.86
PKHD1-201ENST00000340994 GNAI1P63096 354 aa9.71□□□□□ -0.86
PKHD1-201ENST00000340994 STAMBPO95630 424 aa9.71□□□□□ -0.86
PKHD1-201ENST00000340994 JAKMIP3Q5VZ66 844 aa9.71□□□□□ -0.86
PKHD1-201ENST00000340994 ERC1Q8IUD2 1116 aa9.71□□□□□ -0.86
PKHD1-201ENST00000340994 SPC24Q8NBT2 197 aa9.71□□□□□ -0.86
PKHD1-201ENST00000340994 GTF2A1P52655 376 aaPredicted RBP9.7□□□□□ -0.86
PKHD1-201ENST00000340994 GSDMDP57764 484 aa9.7□□□□□ -0.86
PKHD1-201ENST00000340994 CFAP57Q96MR6 1250 aa9.7□□□□□ -0.86
PKHD1-201ENST00000340994 RRBP1Q9P2E9 1410 aaKnown RBP9.7□□□□□ -0.86
PKHD1-201ENST00000340994 KRT222Q8N1A0 295 aa9.7□□□□□ -0.86
PKHD1-201ENST00000340994 GCOM1H8Y6P7 765 aaPredicted RBP9.7□□□□□ -0.86
PKHD1-201ENST00000340994 MYZAPP0CAP1 466 aa9.7□□□□□ -0.86
PKHD1-201ENST00000340994 CDKL5O76039 1030 aa9.7□□□□□ -0.86
PKHD1-201ENST00000340994 MCM4P33991 863 aa9.7□□□□□ -0.86
PKHD1-201ENST00000340994 CCAR1Q8IX12 1150 aaKnown RBP9.7□□□□□ -0.86
PKHD1-201ENST00000340994 TRIM34Q9BYJ4 488 aa9.7□□□□□ -0.86
PKHD1-201ENST00000340994 KIF5CO60282 957 aa9.69□□□□□ -0.86
PKHD1-201ENST00000340994 STK38Q15208 465 aa9.69□□□□□ -0.86
PKHD1-201ENST00000340994 RAPGEF2Q9Y4G8 1499 aa9.69□□□□□ -0.86
PKHD1-201ENST00000340994 EPB41L2O43491 1005 aaKnown RBP9.69□□□□□ -0.86
PKHD1-201ENST00000340994 ZNF397Q8NF99 534 aaPredicted RBP9.69□□□□□ -0.86
PKHD1-201ENST00000340994 PANK3Q9H999 370 aa9.69□□□□□ -0.86
PKHD1-201ENST00000340994 DHX29Q7Z478 1369 aaKnown RBP9.69□□□□□ -0.86
PKHD1-201ENST00000340994 WIZO95785 1651 aa9.69□□□□□ -0.86
PKHD1-201ENST00000340994 SRCIN1Q9C0H9 1055 aa9.69□□□□□ -0.86
PKHD1-201ENST00000340994 MAP2K1Q02750 393 aaPredicted RBP9.69□□□□□ -0.86
PKHD1-201ENST00000340994 DESP17661 470 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 MAP3K11Q16584 847 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 FIBPO43427 364 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 CCDC175P0C221 793 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 DNAAF4Q8WXU2 420 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 HMGB1P09429 215 aaKnown RBP9.68□□□□□ -0.86
PKHD1-201ENST00000340994 EHBP1Q8NDI1 1231 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 WDR66Q8TBY9 1149 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 CDK5RAP3Q96JB5 506 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 ZMYND15Q9H091 742 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 MNAT1P51948 309 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 DDX12PQ92771 950 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 NUP62CLQ9H1M0 184 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 CCDC183Q5T5S1 534 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 ZFYVE27Q5T4F4 411 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 FBXW7Q969H0 707 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 G3V3G9 751 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 DCAF8Q5TAQ9 597 aa9.68□□□□□ -0.86
PKHD1-201ENST00000340994 SEPT6Q14141 434 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 HS1BP3Q53T59 392 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 BMS1Q14692 1282 aaKnown RBP9.67□□□□□ -0.86
PKHD1-201ENST00000340994 CEP63Q96MT8 703 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 TAX1BP1Q86VP1 789 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 UPF3BQ9BZI7 483 aaKnown RBP9.67□□□□□ -0.86
PKHD1-201ENST00000340994 CPSF2Q9P2I0 782 aaKnown RBP9.67□□□□□ -0.86
PKHD1-201ENST00000340994 SWAP70Q9UH65 585 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 CTAGE5O15320 804 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 AMPHP49418 695 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 NEK4P51957 841 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 ANKS4BQ8N8V4 417 aa9.67□□□□□ -0.86
PKHD1-201ENST00000340994 ZSCAN31Q96LW9 406 aaPredicted RBP9.67□□□□□ -0.86
PKHD1-201ENST00000340994 SLC3A2P08195 630 aaKnown RBP9.67□□□□□ -0.86
PKHD1-201ENST00000340994 BBXQ8WY36 941 aaPredicted RBP9.67□□□□□ -0.86
PKHD1-201ENST00000340994 C6orf163Q5TEZ5 329 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms