RNA–Protein interactions for RNA: ENST00000339485.3

VMAC-201, Transcript of vimentin type intermediate filament associated coiled-coil protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMAC, Length 2,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMAC-201ENST00000339485 PPIP5K1Q6PFW1 1433 aa24.29■■□□□ 1.48
VMAC-201ENST00000339485 CGNL1Q0VF96 1302 aa24.29■■□□□ 1.48
VMAC-201ENST00000339485 IL27Q8NEV9 243 aa24.29■■□□□ 1.48
VMAC-201ENST00000339485 NUDT16Q96DE0 195 aaKnown RBP24.28■■□□□ 1.48
VMAC-201ENST00000339485 SKAP1Q86WV1 359 aa24.27■■□□□ 1.48
VMAC-201ENST00000339485 HDGFL2Q7Z4V5 671 aaPredicted RBP24.27■■□□□ 1.48
VMAC-201ENST00000339485 PRR36Q9H6K5 1346 aa24.26■■□□□ 1.47
VMAC-201ENST00000339485 DDRGK1Q96HY6 314 aa24.26■■□□□ 1.47
VMAC-201ENST00000339485 TOPAZ1Q8N9V7 1692 aa24.24■■□□□ 1.47
VMAC-201ENST00000339485 NUTM2FA1L443 756 aa24.24■■□□□ 1.47
VMAC-201ENST00000339485 CCDC61Q9Y6R9 512 aa24.24■■□□□ 1.47
VMAC-201ENST00000339485 CDC42BPGQ6DT37 1551 aa24.23■■□□□ 1.47
VMAC-201ENST00000339485 ITSN1Q15811 1721 aa24.23■■□□□ 1.47
VMAC-201ENST00000339485 MORC1Q86VD1 984 aa24.23■■□□□ 1.47
VMAC-201ENST00000339485 KDM2BQ8NHM5 1336 aa24.22■■□□□ 1.47
VMAC-201ENST00000339485 NSD2O96028 1365 aa24.22■■□□□ 1.47
VMAC-201ENST00000339485 HSPA2P54652 639 aa24.22■■□□□ 1.47
VMAC-201ENST00000339485 KIF20BQ96Q89 1820 aa24.22■■□□□ 1.47
VMAC-201ENST00000339485 NALCNQ8IZF0 1738 aa24.21■■□□□ 1.47
VMAC-201ENST00000339485 AKAP12Q02952 1782 aa24.21■■□□□ 1.47
VMAC-201ENST00000339485 C20orf194Q5TEA3 1177 aa24.21■■□□□ 1.47
VMAC-201ENST00000339485 ANKRD26Q9UPS8 1709 aa24.2■■□□□ 1.47
VMAC-201ENST00000339485 TNNT2P45379 298 aaPredicted RBP24.2■■□□□ 1.46
VMAC-201ENST00000339485 CPSF1Q10570 1443 aaKnown RBP24.2■■□□□ 1.46
VMAC-201ENST00000339485 RGPD8O14715 1765 aaPredicted RBP24.2■■□□□ 1.46
VMAC-201ENST00000339485 MON2Q7Z3U7 1717 aa24.2■■□□□ 1.46
VMAC-201ENST00000339485 LMTK3Q96Q04 1460 aa24.19■■□□□ 1.46
VMAC-201ENST00000339485 RBM33Q96EV2 1170 aaKnown RBP24.18■■□□□ 1.46
VMAC-201ENST00000339485 GGNBP2Q9H3C7 697 aa24.18■■□□□ 1.46
VMAC-201ENST00000339485 NWD1Q149M9 1564 aa24.18■■□□□ 1.46
VMAC-201ENST00000339485 NKTRP30414 1462 aaKnown RBP24.16■■□□□ 1.46
VMAC-201ENST00000339485 FMN2Q9NZ56 1722 aa24.16■■□□□ 1.46
VMAC-201ENST00000339485 FYB1O15117 783 aa24.15■■□□□ 1.46
VMAC-201ENST00000339485 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.15■■□□□ 1.46
VMAC-201ENST00000339485 ANO8Q9HCE9 1232 aaPredicted RBP24.15■■□□□ 1.46
VMAC-201ENST00000339485 ADAMTS8Q9UP79 889 aa24.15■■□□□ 1.46
VMAC-201ENST00000339485 EDC4Q6P2E9 1401 aaKnown RBP24.14■■□□□ 1.45
VMAC-201ENST00000339485 CENPQQ7L2Z9 268 aaPredicted RBP24.14■■□□□ 1.45
VMAC-201ENST00000339485 DUSP27Q5VZP5 1158 aa24.12■■□□□ 1.45
VMAC-201ENST00000339485 ACEP12821 1306 aa24.11■■□□□ 1.45
VMAC-201ENST00000339485 NFKBIBQ15653 356 aa24.1■■□□□ 1.45
VMAC-201ENST00000339485 RTN4Q9NQC3 1192 aaKnown RBP24.1■■□□□ 1.45
VMAC-201ENST00000339485 ZNF521Q96K83 1311 aa24.1■■□□□ 1.45
VMAC-201ENST00000339485 ADGRL3Q9HAR2 1447 aa24.1■■□□□ 1.45
VMAC-201ENST00000339485 NRKQ7Z2Y5 1582 aa24.1■■□□□ 1.45
VMAC-201ENST00000339485 PLEKHG3A1L390 1219 aa24.09■■□□□ 1.45
VMAC-201ENST00000339485 STRCQ7RTU9 1775 aa24.09■■□□□ 1.45
VMAC-201ENST00000339485 ANKARQ7Z5J8 1434 aa24.09■■□□□ 1.45
VMAC-201ENST00000339485 GSE1Q14687 1217 aa24.09■■□□□ 1.45
VMAC-201ENST00000339485 C8orf34Q49A92 452 aa24.08■■□□□ 1.45
VMAC-201ENST00000339485 ZNF692Q9BU19 519 aaPredicted RBP24.08■■□□□ 1.45
VMAC-201ENST00000339485 STRCP1A6NGW2 1772 aa24.08■■□□□ 1.44
VMAC-201ENST00000339485 WDR43Q15061 677 aaKnown RBP eCLIP24.08■■□□□ 1.44
VMAC-201ENST00000339485 FAM161AQ3B820 660 aa24.08■■□□□ 1.44
VMAC-201ENST00000339485 PMFBP1Q8TBY8 1022 aa24.08■■□□□ 1.44
VMAC-201ENST00000339485 POLR3AO14802 1390 aaPredicted RBP24.07■■□□□ 1.44
VMAC-201ENST00000339485 SLC4A3P48751 1232 aa24.07■■□□□ 1.44
VMAC-201ENST00000339485 MTHFSP49914 203 aa24.06■■□□□ 1.44
VMAC-201ENST00000339485 C14orf37Q86TY3 774 aa24.06■■□□□ 1.44
VMAC-201ENST00000339485 NME9Q86XW9 330 aa24.06■■□□□ 1.44
VMAC-201ENST00000339485 USP6P35125 1406 aa24.05■■□□□ 1.44
VMAC-201ENST00000339485 SHPRHQ149N8 1683 aa24.04■■□□□ 1.44
VMAC-201ENST00000339485 PROSER2Q86WR7 435 aaPredicted RBP24.04■■□□□ 1.44
VMAC-201ENST00000339485 GOLGA2Q08379 1002 aa24.03■■□□□ 1.44
VMAC-201ENST00000339485 ZRANB1Q9UGI0 708 aa24.02■■□□□ 1.44
VMAC-201ENST00000339485 NGDNQ8NEJ9 315 aaKnown RBP24.01■■□□□ 1.43
VMAC-201ENST00000339485 DAXXQ9UER7 740 aaPredicted RBP24.01■■□□□ 1.43
VMAC-201ENST00000339485 TTC21BQ7Z4L5 1316 aa24■■□□□ 1.43
VMAC-201ENST00000339485 GOLGA6L2Q8N9W4 650 aaPredicted RBP24■■□□□ 1.43
VMAC-201ENST00000339485 MAP2P11137 1827 aaKnown RBP23.99■■□□□ 1.43
VMAC-201ENST00000339485 PRKCSHP14314 528 aaPredicted RBP23.99■■□□□ 1.43
VMAC-201ENST00000339485 BRPF3Q9ULD4 1205 aa23.99■■□□□ 1.43
VMAC-201ENST00000339485 CFAP53Q96M91 514 aa23.98■■□□□ 1.43
VMAC-201ENST00000339485 SLFN5Q08AF3 891 aa23.98■■□□□ 1.43
VMAC-201ENST00000339485 SSH2Q76I76 1423 aa23.97■■□□□ 1.43
VMAC-201ENST00000339485 FRAT1Q92837 279 aaPredicted RBP23.97■■□□□ 1.43
VMAC-201ENST00000339485 FBLN1P23142 703 aa23.96■■□□□ 1.43
VMAC-201ENST00000339485 COG3Q96JB2 828 aa23.96■■□□□ 1.43
VMAC-201ENST00000339485 TRMT2AQ8IZ69 625 aaKnown RBP23.96■■□□□ 1.43
VMAC-201ENST00000339485 TMEM94Q12767 1356 aa23.95■■□□□ 1.42
VMAC-201ENST00000339485 VIRMAQ69YN4 1812 aaKnown RBP23.94■■□□□ 1.42
VMAC-201ENST00000339485 PHF8Q9UPP1 1060 aa23.94■■□□□ 1.42
VMAC-201ENST00000339485 COL3A1P02461 1466 aaPredicted RBP23.93■■□□□ 1.42
VMAC-201ENST00000339485 OVOS2A0A0J9YW53 1432 aa23.93■■□□□ 1.42
VMAC-201ENST00000339485 OVOS2Q6IE36 1432 aa23.93■■□□□ 1.42
VMAC-201ENST00000339485 CCDC146Q8IYE0 955 aa23.93■■□□□ 1.42
VMAC-201ENST00000339485 RGS3P49796 1198 aa23.92■■□□□ 1.42
VMAC-201ENST00000339485 ESCO1Q5FWF5 840 aa23.92■■□□□ 1.42
VMAC-201ENST00000339485 PIK3C2AO00443 1686 aa23.92■■□□□ 1.42
VMAC-201ENST00000339485 TTC21AQ8NDW8 1320 aa23.91■■□□□ 1.42
VMAC-201ENST00000339485 C19orf44Q9H6X5 657 aa23.91■■□□□ 1.42
VMAC-201ENST00000339485 POLKQ9UBT6 870 aa23.91■■□□□ 1.42
VMAC-201ENST00000339485 AATKQ6ZMQ8 1374 aa23.89■■□□□ 1.41
VMAC-201ENST00000339485 XIRP1Q702N8 1843 aaKnown RBP23.89■■□□□ 1.41
VMAC-201ENST00000339485 SPINK5Q9NQ38 1064 aaPredicted RBP23.89■■□□□ 1.41
VMAC-201ENST00000339485 FRAT2O75474 233 aaPredicted RBP23.88■■□□□ 1.41
VMAC-201ENST00000339485 EMILIN1Q9Y6C2 1016 aa23.88■■□□□ 1.41
VMAC-201ENST00000339485 PNPLA6Q8IY17 1366 aa23.87■■□□□ 1.41
VMAC-201ENST00000339485 ORAI2Q96SN7 254 aa23.87■■□□□ 1.41
VMAC-201ENST00000339485 RRS1Q15050 365 aaKnown RBP23.86■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms