RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 ACEP12821 1306 aa7.77□□□□□ -1.17
PRKDC-202ENST00000338368 LRPPRCP42704 1394 aaKnown RBP7.77□□□□□ -1.17
PRKDC-202ENST00000338368 ST18O60284 1047 aa7.77□□□□□ -1.17
PRKDC-202ENST00000338368 PTMSP20962 102 aa7.77□□□□□ -1.17
PRKDC-202ENST00000338368 L1TD1Q5T7N2 865 aaKnown RBP7.77□□□□□ -1.17
PRKDC-202ENST00000338368 TMEM57Q8N5G2 664 aa7.77□□□□□ -1.17
PRKDC-202ENST00000338368 REC8O95072 547 aa7.76□□□□□ -1.17
PRKDC-202ENST00000338368 ABCA8O94911 1581 aa7.76□□□□□ -1.17
PRKDC-202ENST00000338368 EVA1CP58658 441 aa7.76□□□□□ -1.17
PRKDC-202ENST00000338368 ABCC11Q96J66 1382 aa7.76□□□□□ -1.17
PRKDC-202ENST00000338368 ITSN2Q9NZM3 1697 aa7.76□□□□□ -1.17
PRKDC-202ENST00000338368 PLCB2Q00722 1185 aa7.76□□□□□ -1.17
PRKDC-202ENST00000338368 PLEKHO1Q53GL0 409 aaPredicted RBP7.76□□□□□ -1.17
PRKDC-202ENST00000338368 RPAP2Q8IXW5 612 aaPredicted RBP7.76□□□□□ -1.17
PRKDC-202ENST00000338368 NKTRP30414 1462 aaKnown RBP7.76□□□□□ -1.17
PRKDC-202ENST00000338368 POLR3AO14802 1390 aaPredicted RBP7.76□□□□□ -1.17
PRKDC-202ENST00000338368 IFT57Q9NWB7 429 aa7.76□□□□□ -1.17
PRKDC-202ENST00000338368 GSE1Q14687 1217 aa7.76□□□□□ -1.17
PRKDC-202ENST00000338368 TNRQ92752 1358 aa7.76□□□□□ -1.17
PRKDC-202ENST00000338368 GPATCH3Q96I76 525 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 GOLGA6L4A6NEF3 574 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 POLKQ9UBT6 870 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 UBTFL1P0CB47 393 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-202ENST00000338368 CHMP5Q9NZZ3 219 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 TAOK2Q9UL54 1235 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 COL17A1Q9UMD9 1497 aaPredicted RBP7.75□□□□□ -1.17
PRKDC-202ENST00000338368 HSP90AB4PQ58FF6 505 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 NPHP1O15259 732 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 ZRSR1Q15695 479 aaKnown RBP7.75□□□□□ -1.17
PRKDC-202ENST00000338368 RBM33Q96EV2 1170 aaKnown RBP7.75□□□□□ -1.17
PRKDC-202ENST00000338368 TAF7LQ5H9L4 462 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 INTS3Q68E01 1043 aaKnown RBP7.75□□□□□ -1.17
PRKDC-202ENST00000338368 MCM10Q7L590 875 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 UHRF1BP1LA0JNW5 1464 aa7.75□□□□□ -1.17
PRKDC-202ENST00000338368 AIMP1Q12904 312 aaKnown RBP7.74□□□□□ -1.17
PRKDC-202ENST00000338368 ALDH1L2Q3SY69 923 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 PTMAP06454 111 aaKnown RBP7.74□□□□□ -1.17
PRKDC-202ENST00000338368 PHF8Q9UPP1 1060 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 TTC21BQ7Z4L5 1316 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 PIK3C2GO75747 1445 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 ANO2Q9NQ90 1003 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 CDC45O75419 566 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 NFKBIBQ15653 356 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 HDGFL1Q5TGJ6 251 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 CCDC27Q2M243 656 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.74□□□□□ -1.177e-7■■■□□ 16
PRKDC-202ENST00000338368 CHD1LQ86WJ1 897 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 PLEKHH1Q9ULM0 1364 aa7.74□□□□□ -1.17
PRKDC-202ENST00000338368 SPINK5Q9NQ38 1064 aaPredicted RBP7.74□□□□□ -1.17
PRKDC-202ENST00000338368 NPC1L1Q9UHC9 1359 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 IGHDP01880 384 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 ZC3H6P61129 1189 aaKnown RBP7.73□□□□□ -1.17
PRKDC-202ENST00000338368 TRIM27P14373 513 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 IL16Q14005 1332 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 GOLGA6L3A6NEY3 463 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 SRCIN1Q9C0H9 1055 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 IFIT2P09913 472 aaKnown RBP7.73□□□□□ -1.17
PRKDC-202ENST00000338368 ASXL1Q8IXJ9 1541 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 MSH5O43196 834 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 GNAI2P04899 355 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 ZNF530Q6P9A1 599 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-202ENST00000338368 XPCQ01831 940 aaPredicted RBP7.73□□□□□ -1.17
PRKDC-202ENST00000338368 KCNH5Q8NCM2 988 aa7.73□□□□□ -1.17
PRKDC-202ENST00000338368 MIS18AQ9NYP9 233 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 SURF6O75683 361 aaKnown RBP7.72□□□□□ -1.17
PRKDC-202ENST00000338368 CCT4P50991 539 aaKnown RBP7.72□□□□□ -1.17
PRKDC-202ENST00000338368 RIC3Q7Z5B4 369 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 RIMS2Q9UQ26 1411 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 FOXO3O43524 673 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 GNAT3A8MTJ3 354 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 DIAPH3Q9NSV4 1193 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 TATP17735 454 aaPredicted RBP7.72□□□□□ -1.17
PRKDC-202ENST00000338368 ZRANB1Q9UGI0 708 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 DDX49Q9Y6V7 483 aaKnown RBP7.72□□□□□ -1.17
PRKDC-202ENST00000338368 NPATQ14207 1427 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 G3BP1Q13283 466 aaKnown RBP eCLIP7.72□□□□□ -1.172e-7■■■□□ 17.6
PRKDC-202ENST00000338368 NCKAP5LQ9HCH0 1330 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 HSP90AB2PQ58FF8 381 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 KDM6BO15054 1643 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 PLA2R1Q13018 1463 aa7.72□□□□□ -1.17
PRKDC-202ENST00000338368 ZMYM3Q14202 1370 aa7.71□□□□□ -1.17
PRKDC-202ENST00000338368 A0A1W2PP64 1363 aa7.71□□□□□ -1.18
PRKDC-202ENST00000338368 RUFY2Q8WXA3 655 aa7.71□□□□□ -1.18
PRKDC-202ENST00000338368 TNNQ9UQP3 1299 aa7.71□□□□□ -1.18
PRKDC-202ENST00000338368 ARHGEF5Q12774 1597 aa7.71□□□□□ -1.18
PRKDC-202ENST00000338368 DDX11L8A8MPP1 907 aa7.71□□□□□ -1.18
PRKDC-202ENST00000338368 PBRM1Q86U86 1689 aa7.71□□□□□ -1.18
PRKDC-202ENST00000338368 ATP7AQ04656 1500 aa7.71□□□□□ -1.18
PRKDC-202ENST00000338368 CLASRPQ8N2M8 674 aaKnown RBP7.7□□□□□ -1.18
PRKDC-202ENST00000338368 ATP10AO60312 1499 aa7.7□□□□□ -1.18
PRKDC-202ENST00000338368 YTHDC2Q9H6S0 1430 aaKnown RBP7.7□□□□□ -1.18
PRKDC-202ENST00000338368 FOXD4L5Q5VV16 416 aaPredicted RBP7.7□□□□□ -1.18
PRKDC-202ENST00000338368 FOXD4L4Q8WXT5 416 aaPredicted RBP7.7□□□□□ -1.18
PRKDC-202ENST00000338368 FAM83GA6ND36 823 aa7.7□□□□□ -1.18
PRKDC-202ENST00000338368 F6X3S4 739 aa7.69□□□□□ -1.18
PRKDC-202ENST00000338368 PCDHB15Q9Y5E8 787 aa7.69□□□□□ -1.18
PRKDC-202ENST00000338368 TBX22Q9Y458 520 aa7.69□□□□□ -1.18
PRKDC-202ENST00000338368 SKOR2Q2VWA4 1001 aaPredicted RBP7.69□□□□□ -1.18
PRKDC-202ENST00000338368 USHBP1Q8N6Y0 703 aa7.69□□□□□ -1.18
PRKDC-202ENST00000338368 LRRCC1Q9C099 1032 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms