RNA–Protein interactions for RNA: ENST00000337138.8

HIF1A-202, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HIF1A, Length 3,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-202ENST00000337138 SPATA31D1Q6ZQQ2 1576 aa12.98□□□□□ -0.33
HIF1A-202ENST00000337138 LRRC7Q96NW7 1537 aa12.98□□□□□ -0.33
HIF1A-202ENST00000337138 TRAK1Q9UPV9 953 aa12.98□□□□□ -0.33
HIF1A-202ENST00000337138 PPIP5K1Q6PFW1 1433 aa12.97□□□□□ -0.33
HIF1A-202ENST00000337138 KIF3BO15066 747 aa12.97□□□□□ -0.33
HIF1A-202ENST00000337138 MLECQ14165 292 aa12.97□□□□□ -0.33
HIF1A-202ENST00000337138 E9PSI1 815 aa12.97□□□□□ -0.33
HIF1A-202ENST00000337138 NSD2O96028 1365 aa12.97□□□□□ -0.33
HIF1A-202ENST00000337138 VSIG10Q8N0Z9 540 aa12.96□□□□□ -0.33
HIF1A-202ENST00000337138 RPGRIP1LQ68CZ1 1315 aa12.96□□□□□ -0.33
HIF1A-202ENST00000337138 RARSP54136 660 aaKnown RBP12.96□□□□□ -0.34
HIF1A-202ENST00000337138 MORC1Q86VD1 984 aa12.96□□□□□ -0.34
HIF1A-202ENST00000337138 TNNQ9UQP3 1299 aa12.96□□□□□ -0.34
HIF1A-202ENST00000337138 NCOA3Q9Y6Q9 1424 aa12.95□□□□□ -0.34
HIF1A-202ENST00000337138 UPF2Q9HAU5 1272 aaKnown RBP12.94□□□□□ -0.34
HIF1A-202ENST00000337138 PCDHB15Q9Y5E8 787 aa12.94□□□□□ -0.34
HIF1A-202ENST00000337138 CENPJQ9HC77 1338 aaPredicted RBP12.94□□□□□ -0.34
HIF1A-202ENST00000337138 A0A1W2PP64 1363 aa12.94□□□□□ -0.34
HIF1A-202ENST00000337138 U2SURPO15042 1029 aaKnown RBP12.94□□□□□ -0.34
HIF1A-202ENST00000337138 AGLP35573 1532 aa12.93□□□□□ -0.34
HIF1A-202ENST00000337138 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
HIF1A-202ENST00000337138 TMEM132EQ6IEE7 984 aa12.92□□□□□ -0.34
HIF1A-202ENST00000337138 SLC12A5Q9H2X9 1139 aa12.92□□□□□ -0.34
HIF1A-202ENST00000337138 PEAK1Q9H792 1746 aa12.92□□□□□ -0.34
HIF1A-202ENST00000337138 DIP2BQ9P265 1576 aa12.92□□□□□ -0.34
HIF1A-202ENST00000337138 YTHDC2Q9H6S0 1430 aaKnown RBP12.92□□□□□ -0.34
HIF1A-202ENST00000337138 PLEKHG5O94827 1062 aa12.92□□□□□ -0.34
HIF1A-202ENST00000337138 WDR63Q8IWG1 891 aa12.92□□□□□ -0.34
HIF1A-202ENST00000337138 TRIM35Q9UPQ4 493 aa12.92□□□□□ -0.34
HIF1A-202ENST00000337138 SLC24A1O60721 1099 aa12.91□□□□□ -0.34
HIF1A-202ENST00000337138 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
HIF1A-202ENST00000337138 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.343e-6■■■■□ 23.3
HIF1A-202ENST00000337138 DDIT3P35638 169 aa12.91□□□□□ -0.34
HIF1A-202ENST00000337138 GGT6Q6P531 493 aa12.91□□□□□ -0.34
HIF1A-202ENST00000337138 FTSJ3Q8IY81 847 aaKnown RBP12.91□□□□□ -0.34
HIF1A-202ENST00000337138 FAM135BQ49AJ0 1406 aa12.9□□□□□ -0.34
HIF1A-202ENST00000337138 BECN1Q14457 450 aa12.9□□□□□ -0.34
HIF1A-202ENST00000337138 STK26Q9P289 416 aa12.9□□□□□ -0.34
HIF1A-202ENST00000337138 POGKQ9P215 609 aa12.9□□□□□ -0.34
HIF1A-202ENST00000337138 STAG3Q9UJ98 1225 aa12.9□□□□□ -0.34
HIF1A-202ENST00000337138 PIK3R4Q99570 1358 aa12.9□□□□□ -0.35
HIF1A-202ENST00000337138 RIMS1Q86UR5 1692 aaKnown RBP12.9□□□□□ -0.35
HIF1A-202ENST00000337138 MFAP1P55081 439 aaKnown RBP12.89□□□□□ -0.35
HIF1A-202ENST00000337138 KIF13AQ9H1H9 1805 aa12.89□□□□□ -0.35
HIF1A-202ENST00000337138 FMN2Q9NZ56 1722 aa12.89□□□□□ -0.35
HIF1A-202ENST00000337138 CPSF1Q10570 1443 aaKnown RBP12.89□□□□□ -0.35
HIF1A-202ENST00000337138 CPS1P31327 1500 aa12.88□□□□□ -0.35
HIF1A-202ENST00000337138 ITSN1Q15811 1721 aa12.88□□□□□ -0.35
HIF1A-202ENST00000337138 RUNDC1Q96C34 613 aa12.88□□□□□ -0.35
HIF1A-202ENST00000337138 LRRC37A3O60309 1634 aa12.88□□□□□ -0.35
HIF1A-202ENST00000337138 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
HIF1A-202ENST00000337138 TCP11L2Q8N4U5 519 aa12.87□□□□□ -0.35
HIF1A-202ENST00000337138 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.87□□□□□ -0.35
HIF1A-202ENST00000337138 UBR1Q8IWV7 1749 aa12.87□□□□□ -0.35
HIF1A-202ENST00000337138 ZNF692Q9BU19 519 aaPredicted RBP12.87□□□□□ -0.35
HIF1A-202ENST00000337138 RSPH6AQ9H0K4 717 aa12.86□□□□□ -0.35
HIF1A-202ENST00000337138 PNNQ9H307 717 aaKnown RBP12.86□□□□□ -0.35
HIF1A-202ENST00000337138 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
HIF1A-202ENST00000337138 PKNOX2Q96KN3 472 aa12.86□□□□□ -0.35
HIF1A-202ENST00000337138 FOXD4L1Q9NU39 408 aa12.86□□□□□ -0.35
HIF1A-202ENST00000337138 ATP7BP35670 1465 aa12.85□□□□□ -0.35
HIF1A-202ENST00000337138 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
HIF1A-202ENST00000337138 AAMPQ13685 434 aa12.85□□□□□ -0.35
HIF1A-202ENST00000337138 A2ML1A8K2U0 1454 aa12.85□□□□□ -0.35
HIF1A-202ENST00000337138 MTHFSP49914 203 aa12.85□□□□□ -0.35
HIF1A-202ENST00000337138 UBE2Q2Q8WVN8 375 aa12.85□□□□□ -0.35
HIF1A-202ENST00000337138 TRIM44Q96DX7 344 aaPredicted RBP12.85□□□□□ -0.35
HIF1A-202ENST00000337138 ARID3AQ99856 593 aa12.85□□□□□ -0.35
HIF1A-202ENST00000337138 HSP90AA1P07900 732 aaKnown RBP12.84□□□□□ -0.35
HIF1A-202ENST00000337138 ITPRIPQ8IWB1 547 aa12.84□□□□□ -0.35
HIF1A-202ENST00000337138 TBC1D32Q96NH3 1257 aa12.83□□□□□ -0.35
HIF1A-202ENST00000337138 PDZRN3Q9UPQ7 1066 aa12.83□□□□□ -0.35
HIF1A-202ENST00000337138 TECPR2O15040 1411 aa12.83□□□□□ -0.36
HIF1A-202ENST00000337138 PTCH1Q13635 1447 aa12.83□□□□□ -0.36
HIF1A-202ENST00000337138 CFAP53Q96M91 514 aa12.82□□□□□ -0.36
HIF1A-202ENST00000337138 SMC4Q9NTJ3 1288 aa12.82□□□□□ -0.36
HIF1A-202ENST00000337138 RGS12O14924 1447 aa12.82□□□□□ -0.36
HIF1A-202ENST00000337138 ELL2O00472 640 aaPredicted RBP12.81□□□□□ -0.36
HIF1A-202ENST00000337138 HSP90AA2PQ14568 343 aaPredicted RBP12.81□□□□□ -0.36
HIF1A-202ENST00000337138 IL16Q14005 1332 aa12.81□□□□□ -0.36
HIF1A-202ENST00000337138 XRN1Q8IZH2 1706 aaKnown RBP12.81□□□□□ -0.36
HIF1A-202ENST00000337138 FYB1O15117 783 aa12.81□□□□□ -0.36
HIF1A-202ENST00000337138 SRPK2P78362 688 aaKnown RBP12.81□□□□□ -0.36
HIF1A-202ENST00000337138 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
HIF1A-202ENST00000337138 IDI1Q13907 227 aa12.8□□□□□ -0.36
HIF1A-202ENST00000337138 CABP2Q9NPB3 220 aa12.8□□□□□ -0.36
HIF1A-202ENST00000337138 RWDD1Q9H446 243 aaPredicted RBP12.8□□□□□ -0.36
HIF1A-202ENST00000337138 CDK12Q9NYV4 1490 aaPredicted RBP12.79□□□□□ -0.36
HIF1A-202ENST00000337138 ANP32BQ92688 251 aaKnown RBP12.79□□□□□ -0.36
HIF1A-202ENST00000337138 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
HIF1A-202ENST00000337138 MAPK8IP3Q9UPT6 1336 aa12.79□□□□□ -0.36
HIF1A-202ENST00000337138 FAM208AQ9UK61 1670 aaKnown RBP12.79□□□□□ -0.36
HIF1A-202ENST00000337138 KIF2CQ99661 725 aa12.79□□□□□ -0.36
HIF1A-202ENST00000337138 CT47B1P0C2W7 299 aaPredicted RBP12.78□□□□□ -0.36
HIF1A-202ENST00000337138 MVPQ14764 893 aaKnown RBP12.78□□□□□ -0.36
HIF1A-202ENST00000337138 SMC5Q8IY18 1101 aa12.78□□□□□ -0.36
HIF1A-202ENST00000337138 PMFBP1Q8TBY8 1022 aa12.78□□□□□ -0.36
HIF1A-202ENST00000337138 CRYBG1Q9Y4K1 1723 aa12.78□□□□□ -0.36
HIF1A-202ENST00000337138 RGPD8O14715 1765 aaPredicted RBP12.77□□□□□ -0.36
HIF1A-202ENST00000337138 ZBTB40Q9NUA8 1239 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms