RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 DIP2BQ9P265 1576 aa11.7□□□□□ -0.54
FNDC3B-201ENST00000336824 RRS1Q15050 365 aaKnown RBP11.69□□□□□ -0.54
FNDC3B-201ENST00000336824 ACEP12821 1306 aa11.69□□□□□ -0.54
FNDC3B-201ENST00000336824 TTC21BQ7Z4L5 1316 aa11.69□□□□□ -0.54
FNDC3B-201ENST00000336824 ELL2O00472 640 aaPredicted RBP11.69□□□□□ -0.54
FNDC3B-201ENST00000336824 EIF2S2P20042 333 aaKnown RBP11.69□□□□□ -0.54
FNDC3B-201ENST00000336824 KCNJ4P48050 445 aa11.69□□□□□ -0.54
FNDC3B-201ENST00000336824 USP35Q9P2H5 1018 aa11.69□□□□□ -0.54
FNDC3B-201ENST00000336824 CLTCQ00610 1675 aaKnown RBP11.68□□□□□ -0.54
FNDC3B-201ENST00000336824 CAMSAP1Q5T5Y3 1602 aa11.68□□□□□ -0.54
FNDC3B-201ENST00000336824 INO80Q9ULG1 1556 aaPredicted RBP11.68□□□□□ -0.54
FNDC3B-201ENST00000336824 CLUAP1Q96AJ1 413 aa11.68□□□□□ -0.54
FNDC3B-201ENST00000336824 KDM5CP41229 1560 aa11.68□□□□□ -0.54
FNDC3B-201ENST00000336824 MCCP23508 829 aa11.68□□□□□ -0.54
FNDC3B-201ENST00000336824 GORABQ5T7V8 394 aa11.67□□□□□ -0.54
FNDC3B-201ENST00000336824 DDX19BQ9UMR2 479 aa11.67□□□□□ -0.54
FNDC3B-201ENST00000336824 MYOM2P54296 1465 aa11.67□□□□□ -0.54
FNDC3B-201ENST00000336824 ARHGAP31Q2M1Z3 1444 aa11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 RRP1P56182 461 aaKnown RBP11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 ZC3H6P61129 1189 aaKnown RBP11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 WDR63Q8IWG1 891 aa11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 NME9Q86XW9 330 aa11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 ZNF530Q6P9A1 599 aaPredicted RBP11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 PRDM15P57071 1507 aaPredicted RBP11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 AAMPQ13685 434 aa11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 CCDC30Q5VVM6 783 aa11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 RBM33Q96EV2 1170 aaKnown RBP11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 PHF23Q9BUL5 403 aaPredicted RBP11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 C9orf78Q9NZ63 289 aaPredicted RBP11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 CT47B1P0C2W7 299 aaPredicted RBP11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 SETD1BQ9UPS6 1966 aaKnown RBP11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 KCNA6P17658 529 aa11.66□□□□□ -0.54
FNDC3B-201ENST00000336824 C11orf95C9JLR9 678 aaPredicted RBP11.65□□□□□ -0.54
FNDC3B-201ENST00000336824 HSPA2P54652 639 aa11.65□□□□□ -0.54
FNDC3B-201ENST00000336824 PTPRTO14522 1441 aa11.65□□□□□ -0.54
FNDC3B-201ENST00000336824 AMOTQ4VCS5 1084 aa11.65□□□□□ -0.54
FNDC3B-201ENST00000336824 KIDINS220Q9ULH0 1771 aa11.65□□□□□ -0.54
FNDC3B-201ENST00000336824 FKBP5Q13451 457 aaPredicted RBP11.64□□□□□ -0.55
FNDC3B-201ENST00000336824 BCL2L13Q9BXK5 485 aa11.64□□□□□ -0.55
FNDC3B-201ENST00000336824 CABP4P57796 275 aa11.64□□□□□ -0.55
FNDC3B-201ENST00000336824 RNF17Q9BXT8 1623 aaKnown RBP11.64□□□□□ -0.55
FNDC3B-201ENST00000336824 DIP2CQ9Y2E4 1556 aa11.64□□□□□ -0.55
FNDC3B-201ENST00000336824 KIAA1211Q6ZU35 1233 aa11.64□□□□□ -0.55
FNDC3B-201ENST00000336824 COL17A1Q9UMD9 1497 aaPredicted RBP11.64□□□□□ -0.55
FNDC3B-201ENST00000336824 APBB1O00213 710 aa11.64□□□□□ -0.55
FNDC3B-201ENST00000336824 E9PCH4 1651 aa11.63□□□□□ -0.55
FNDC3B-201ENST00000336824 DZIP1LQ8IYY4 767 aaKnown RBP11.63□□□□□ -0.55
FNDC3B-201ENST00000336824 PLEKHG1Q9ULL1 1385 aa11.63□□□□□ -0.55
FNDC3B-201ENST00000336824 HSP90B1P14625 803 aaKnown RBP11.63□□□□□ -0.55
FNDC3B-201ENST00000336824 NFE2L2Q16236 605 aa11.63□□□□□ -0.55
FNDC3B-201ENST00000336824 FGD1P98174 961 aa11.63□□□□□ -0.55
FNDC3B-201ENST00000336824 MAP3K4Q9Y6R4 1608 aa11.62□□□□□ -0.55
FNDC3B-201ENST00000336824 GNAT3A8MTJ3 354 aa11.62□□□□□ -0.55
FNDC3B-201ENST00000336824 ABCC11Q96J66 1382 aa11.62□□□□□ -0.55
FNDC3B-201ENST00000336824 ARHGEF40Q8TER5 1519 aa11.62□□□□□ -0.55
FNDC3B-201ENST00000336824 ABCA6Q8N139 1617 aa11.62□□□□□ -0.55
FNDC3B-201ENST00000336824 CLTCL1P53675 1640 aa11.62□□□□□ -0.55
FNDC3B-201ENST00000336824 UBAP1LF5GYI3 381 aa11.62□□□□□ -0.55
FNDC3B-201ENST00000336824 LMTK3Q96Q04 1460 aa11.62□□□□□ -0.55
FNDC3B-201ENST00000336824 MSH5O43196 834 aa11.61□□□□□ -0.55
FNDC3B-201ENST00000336824 SIRT1Q96EB6 747 aa11.61□□□□□ -0.55
FNDC3B-201ENST00000336824 G3V3G9 751 aa11.61□□□□□ -0.55
FNDC3B-201ENST00000336824 DCAF8Q5TAQ9 597 aa11.61□□□□□ -0.55
FNDC3B-201ENST00000336824 RIC3Q7Z5B4 369 aa11.61□□□□□ -0.55
FNDC3B-201ENST00000336824 NECTIN2Q92692 538 aa11.61□□□□□ -0.55
FNDC3B-201ENST00000336824 ZFYVE9O95405 1425 aa11.61□□□□□ -0.55
FNDC3B-201ENST00000336824 DDX54Q8TDD1 881 aaKnown RBP11.61□□□□□ -0.55
FNDC3B-201ENST00000336824 ZNF428Q96B54 188 aa11.61□□□□□ -0.55
FNDC3B-201ENST00000336824 KIF6Q6ZMV9 814 aa11.6□□□□□ -0.55
FNDC3B-201ENST00000336824 CENPQQ7L2Z9 268 aaPredicted RBP11.6□□□□□ -0.55
FNDC3B-201ENST00000336824 ANP32BQ92688 251 aaKnown RBP11.6□□□□□ -0.55
FNDC3B-201ENST00000336824 TESK2Q96S53 571 aa11.6□□□□□ -0.55
FNDC3B-201ENST00000336824 SF3B2Q13435 895 aaKnown RBP11.6□□□□□ -0.55
FNDC3B-201ENST00000336824 SYNMO15061 1565 aa11.6□□□□□ -0.55
FNDC3B-201ENST00000336824 LAMC1P11047 1609 aa11.6□□□□□ -0.55
FNDC3B-201ENST00000336824 TCERG1O14776 1098 aaKnown RBP11.6□□□□□ -0.55
FNDC3B-201ENST00000336824 SPATA31E1Q6ZUB1 1445 aa11.6□□□□□ -0.55
FNDC3B-201ENST00000336824 TMPOP42166 694 aaKnown RBP11.59□□□□□ -0.55
FNDC3B-201ENST00000336824 TWISTNBQ3B726 338 aaPredicted RBP11.59□□□□□ -0.55
FNDC3B-201ENST00000336824 EDC4Q6P2E9 1401 aaKnown RBP11.59□□□□□ -0.55
FNDC3B-201ENST00000336824 LMTK2Q8IWU2 1503 aa11.58□□□□□ -0.56
FNDC3B-201ENST00000336824 NGLY1Q96IV0 654 aa11.58□□□□□ -0.56
FNDC3B-201ENST00000336824 NPHP4O75161 1426 aaPredicted RBP11.58□□□□□ -0.56
FNDC3B-201ENST00000336824 ADGRB3O60242 1522 aa11.58□□□□□ -0.56
FNDC3B-201ENST00000336824 GOLGA6L22H0YM25 854 aa11.58□□□□□ -0.56
FNDC3B-201ENST00000336824 LRRFIP1Q32MZ4 808 aaKnown RBP11.58□□□□□ -0.56
FNDC3B-201ENST00000336824 AGLP35573 1532 aa11.58□□□□□ -0.56
FNDC3B-201ENST00000336824 BTBD11A6QL63 1104 aa11.58□□□□□ -0.56
FNDC3B-201ENST00000336824 ADAMTS2O95450 1211 aa11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 NCLP19338 710 aaKnown RBP11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 FER1L4A9Z1Z3 1794 aa11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 FYB1O15117 783 aa11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 HSP90AB4PQ58FF6 505 aa11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 COG6Q9Y2V7 657 aa11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 TRIM6-TRIM34B2RNG4 842 aa11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 HDGFL1Q5TGJ6 251 aa11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 EMILIN1Q9Y6C2 1016 aa11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 PPRC1Q5VV67 1664 aaKnown RBP11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 PIK3C2GO75747 1445 aa11.57□□□□□ -0.56
FNDC3B-201ENST00000336824 LTKP29376 864 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms