RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 PDE3AQ14432 1141 aa15.59■□□□□ 0.09
HLCS-201ENST00000336648 NECTIN2Q92692 538 aa15.59■□□□□ 0.09
HLCS-201ENST00000336648 FBXW7Q969H0 707 aa15.59■□□□□ 0.09
HLCS-201ENST00000336648 AXDND1Q5T1B0 1012 aaPredicted RBP15.58■□□□□ 0.09
HLCS-201ENST00000336648 ZNHIT6Q9NWK9 470 aaKnown RBP15.58■□□□□ 0.08
HLCS-201ENST00000336648 TRAK2O60296 914 aa15.58■□□□□ 0.08
HLCS-201ENST00000336648 CDK5RAP3Q96JB5 506 aa15.58■□□□□ 0.08
HLCS-201ENST00000336648 RRBP1Q9P2E9 1410 aaKnown RBP15.57■□□□□ 0.08
HLCS-201ENST00000336648 CCAR1Q8IX12 1150 aaKnown RBP15.57■□□□□ 0.08
HLCS-201ENST00000336648 FYCO1Q9BQS8 1478 aa15.57■□□□□ 0.08
HLCS-201ENST00000336648 CCDC27Q2M243 656 aa15.57■□□□□ 0.08
HLCS-201ENST00000336648 WWC2Q6AWC2 1192 aa15.57■□□□□ 0.08
HLCS-201ENST00000336648 SYTL4Q96C24 671 aaPredicted RBP15.57■□□□□ 0.08
HLCS-201ENST00000336648 SYCP1Q15431 976 aa15.56■□□□□ 0.08
HLCS-201ENST00000336648 ZFYVE27Q5T4F4 411 aa15.56■□□□□ 0.08
HLCS-201ENST00000336648 TAF3Q5VWG9 929 aa15.56■□□□□ 0.08
HLCS-201ENST00000336648 NEFHP12036 1026 aa15.56■□□□□ 0.08
HLCS-201ENST00000336648 DEF6Q9H4E7 631 aa15.56■□□□□ 0.08
HLCS-201ENST00000336648 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.56■□□□□ 0.08
HLCS-201ENST00000336648 ATF3P18847 181 aa15.56■□□□□ 0.08
HLCS-201ENST00000336648 ANKRD18AQ8IVF6 992 aa15.56■□□□□ 0.08
HLCS-201ENST00000336648 SMC2O95347 1197 aa15.55■□□□□ 0.08
HLCS-201ENST00000336648 PLEKHO1Q53GL0 409 aaPredicted RBP15.55■□□□□ 0.08
HLCS-201ENST00000336648 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.55■□□□□ 0.08
HLCS-201ENST00000336648 GNL3LQ9NVN8 582 aaKnown RBP15.55■□□□□ 0.08
HLCS-201ENST00000336648 PNISRQ8TF01 805 aaKnown RBP15.55■□□□□ 0.08
HLCS-201ENST00000336648 STIM1Q13586 685 aa15.55■□□□□ 0.08
HLCS-201ENST00000336648 STK38Q15208 465 aa15.55■□□□□ 0.08
HLCS-201ENST00000336648 FGD6Q6ZV73 1430 aa15.55■□□□□ 0.08
HLCS-201ENST00000336648 SURF6O75683 361 aaKnown RBP15.54■□□□□ 0.08
HLCS-201ENST00000336648 GOLGA6L10A6NI86 522 aa15.54■□□□□ 0.08
HLCS-201ENST00000336648 CCDC192P0DO97 292 aa15.54■□□□□ 0.08
HLCS-201ENST00000336648 SKIDA1Q1XH10 827 aa15.54■□□□□ 0.08
HLCS-201ENST00000336648 PANK1Q8TE04 598 aa15.54■□□□□ 0.08
HLCS-201ENST00000336648 GPRASP1Q5JY77 1395 aa15.54■□□□□ 0.08
HLCS-201ENST00000336648 CBFA2T2O43439 604 aa15.53■□□□□ 0.08
HLCS-201ENST00000336648 GNAI2P04899 355 aa15.53■□□□□ 0.08
HLCS-201ENST00000336648 KIF6Q6ZMV9 814 aa15.53■□□□□ 0.08
HLCS-201ENST00000336648 NEK4P51957 841 aa15.53■□□□□ 0.08
HLCS-201ENST00000336648 SMG6Q86US8 1419 aaKnown RBP15.53■□□□□ 0.08
HLCS-201ENST00000336648 WDR33Q9C0J8 1336 aaKnown RBP15.53■□□□□ 0.08
HLCS-201ENST00000336648 CCT4P50991 539 aaKnown RBP15.53■□□□□ 0.08
HLCS-201ENST00000336648 FOSBP53539 338 aa15.53■□□□□ 0.08
HLCS-201ENST00000336648 ERLIN1O75477 346 aa15.52■□□□□ 0.08
HLCS-201ENST00000336648 CCDC158Q5M9N0 1113 aa15.52■□□□□ 0.08
HLCS-201ENST00000336648 BCL11BQ9C0K0 894 aaPredicted RBP15.52■□□□□ 0.08
HLCS-201ENST00000336648 SRCIN1Q9C0H9 1055 aa15.52■□□□□ 0.08
HLCS-201ENST00000336648 NLRP2Q9NX02 1062 aa15.52■□□□□ 0.08
HLCS-201ENST00000336648 MEX3CQ5U5Q3 659 aaKnown RBP15.52■□□□□ 0.08
HLCS-201ENST00000336648 HMOX1P09601 288 aa15.52■□□□□ 0.07
HLCS-201ENST00000336648 TRIM22Q8IYM9 498 aa15.52■□□□□ 0.07
HLCS-201ENST00000336648 ZSCAN25Q6NSZ9 544 aa15.51■□□□□ 0.07
HLCS-201ENST00000336648 NACAP1Q9BZK3 213 aa15.51■□□□□ 0.07
HLCS-201ENST00000336648 CYP46A1Q9Y6A2 500 aa15.51■□□□□ 0.07
HLCS-201ENST00000336648 IQCEQ6IPM2 695 aa15.51■□□□□ 0.07
HLCS-201ENST00000336648 AEBP2Q6ZN18 517 aaPredicted RBP15.51■□□□□ 0.07
HLCS-201ENST00000336648 GIMAP7Q8NHV1 300 aa15.51■□□□□ 0.07
HLCS-201ENST00000336648 AIMP1Q12904 312 aaKnown RBP15.51■□□□□ 0.07
HLCS-201ENST00000336648 PPFIBP1Q86W92 1011 aa15.51■□□□□ 0.07
HLCS-201ENST00000336648 ANKRD50Q9ULJ7 1429 aa15.5■□□□□ 0.07
HLCS-201ENST00000336648 IKQ13123 557 aaPredicted RBP15.5■□□□□ 0.07
HLCS-201ENST00000336648 EIF3JO75822 258 aaKnown RBP15.5■□□□□ 0.07
HLCS-201ENST00000336648 KRT18P05783 430 aaKnown RBP15.5■□□□□ 0.07
HLCS-201ENST00000336648 TCP11L2Q8N4U5 519 aa15.5■□□□□ 0.07
HLCS-201ENST00000336648 CIZ1Q9ULV3 898 aaPredicted RBP15.5■□□□□ 0.07
HLCS-201ENST00000336648 FANCD2Q9BXW9 1451 aa15.5■□□□□ 0.07
HLCS-201ENST00000336648 RNF214Q8ND24 703 aa15.49■□□□□ 0.07
HLCS-201ENST00000336648 GGNBP2Q9H3C7 697 aa15.49■□□□□ 0.07
HLCS-201ENST00000336648 CDKL5O76039 1030 aa15.49■□□□□ 0.07
HLCS-201ENST00000336648 ZSCAN31Q96LW9 406 aaPredicted RBP15.49■□□□□ 0.07
HLCS-201ENST00000336648 FYB1O15117 783 aa15.49■□□□□ 0.07
HLCS-201ENST00000336648 HFM1A2PYH4 1435 aa15.49■□□□□ 0.07
HLCS-201ENST00000336648 RBM10P98175 930 aaKnown RBP15.49■□□□□ 0.07
HLCS-201ENST00000336648 NOL7Q9UMY1 257 aaKnown RBP15.49■□□□□ 0.07
HLCS-201ENST00000336648 PRPF40AO75400 957 aaKnown RBP15.48■□□□□ 0.07
HLCS-201ENST00000336648 NLRP6P59044 892 aa15.48■□□□□ 0.07
HLCS-201ENST00000336648 KRT85P78386 507 aa15.48■□□□□ 0.07
HLCS-201ENST00000336648 SEPT7Q16181 437 aaKnown RBP15.48■□□□□ 0.07
HLCS-201ENST00000336648 PDZRN3Q9UPQ7 1066 aa15.48■□□□□ 0.07
HLCS-201ENST00000336648 HMGB2P26583 209 aaKnown RBP15.48■□□□□ 0.07
HLCS-201ENST00000336648 TWISTNBQ3B726 338 aaPredicted RBP15.48■□□□□ 0.07
HLCS-201ENST00000336648 EZRP15311 586 aaKnown RBP15.48■□□□□ 0.07
HLCS-201ENST00000336648 MTHFSP49914 203 aa15.48■□□□□ 0.07
HLCS-201ENST00000336648 ENOX2Q16206 610 aaKnown RBP15.48■□□□□ 0.07
HLCS-201ENST00000336648 ZNF428Q96B54 188 aa15.48■□□□□ 0.07
HLCS-201ENST00000336648 TTC39AQ5SRH9 613 aa15.48■□□□□ 0.07
HLCS-201ENST00000336648 TTLL5Q6EMB2 1281 aa15.48■□□□□ 0.07
HLCS-201ENST00000336648 ADAMTS8Q9UP79 889 aa15.47■□□□□ 0.07
HLCS-201ENST00000336648 ATAD2BQ9ULI0 1458 aa15.47■□□□□ 0.07
HLCS-201ENST00000336648 SERPINC1P01008 464 aa15.47■□□□□ 0.07
HLCS-201ENST00000336648 DNAJC2Q99543 621 aaKnown RBP15.47■□□□□ 0.07
HLCS-201ENST00000336648 WDR63Q8IWG1 891 aa15.47■□□□□ 0.07
HLCS-201ENST00000336648 WIZO95785 1651 aa15.47■□□□□ 0.07
HLCS-201ENST00000336648 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.47■□□□□ 0.075e-6■□□□□ 8.4
HLCS-201ENST00000336648 ANKRD62A6NC57 917 aa15.46■□□□□ 0.07
HLCS-201ENST00000336648 CCDC57Q2TAC2 916 aa15.46■□□□□ 0.07
HLCS-201ENST00000336648 CCDC112Q8NEF3 446 aa15.46■□□□□ 0.07
HLCS-201ENST00000336648 TNMDQ9H2S6 317 aa15.46■□□□□ 0.07
HLCS-201ENST00000336648 PPP2R1AP30153 589 aa15.46■□□□□ 0.06
HLCS-201ENST00000336648 KRT32Q14532 448 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms