RNA–Protein interactions for RNA: ENST00000336219.3

CDCA4-201, Transcript of cell division cycle associated 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA4, Length 2,513 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA4-201ENST00000336219 TBC1D32Q96NH3 1257 aa25.35■■□□□ 1.65
CDCA4-201ENST00000336219 CLTCQ00610 1675 aaKnown RBP25.35■■□□□ 1.65
CDCA4-201ENST00000336219 PLEKHF1Q96S99 279 aa25.34■■□□□ 1.65
CDCA4-201ENST00000336219 CT47B1P0C2W7 299 aaPredicted RBP25.33■■□□□ 1.65
CDCA4-201ENST00000336219 GGNBP2Q9H3C7 697 aa25.33■■□□□ 1.65
CDCA4-201ENST00000336219 ATAD2Q6PL18 1390 aa25.33■■□□□ 1.65
CDCA4-201ENST00000336219 MVPQ14764 893 aaKnown RBP25.32■■□□□ 1.64
CDCA4-201ENST00000336219 FAM43AQ8N2R8 423 aa25.32■■□□□ 1.64
CDCA4-201ENST00000336219 YEATS2Q9ULM3 1422 aa25.32■■□□□ 1.64
CDCA4-201ENST00000336219 MED14O60244 1454 aa25.32■■□□□ 1.64
CDCA4-201ENST00000336219 UPF2Q9HAU5 1272 aaKnown RBP25.32■■□□□ 1.64
CDCA4-201ENST00000336219 CD163L1Q9NR16 1453 aa25.32■■□□□ 1.64
CDCA4-201ENST00000336219 ZKSCAN2Q63HK3 967 aa25.31■■□□□ 1.64
CDCA4-201ENST00000336219 RWDD1Q9H446 243 aaPredicted RBP25.31■■□□□ 1.64
CDCA4-201ENST00000336219 U2SURPO15042 1029 aaKnown RBP25.31■■□□□ 1.64
CDCA4-201ENST00000336219 TMPOP42166 694 aaKnown RBP25.3■■□□□ 1.64
CDCA4-201ENST00000336219 TSR2Q969E8 191 aaKnown RBP25.3■■□□□ 1.64
CDCA4-201ENST00000336219 SENP3Q9H4L4 574 aaPredicted RBP25.3■■□□□ 1.64
CDCA4-201ENST00000336219 TERF2IPQ9NYB0 399 aa25.29■■□□□ 1.64
CDCA4-201ENST00000336219 FYB1O15117 783 aa25.29■■□□□ 1.64
CDCA4-201ENST00000336219 TRIM35Q9UPQ4 493 aa25.29■■□□□ 1.64
CDCA4-201ENST00000336219 YTHDC2Q9H6S0 1430 aaKnown RBP25.29■■□□□ 1.64
CDCA4-201ENST00000336219 MINK1Q8N4C8 1332 aaPredicted RBP25.29■■□□□ 1.64
CDCA4-201ENST00000336219 DZIP1LQ8IYY4 767 aaKnown RBP25.28■■□□□ 1.64
CDCA4-201ENST00000336219 PRAM1Q96QH2 718 aa25.28■■□□□ 1.64
CDCA4-201ENST00000336219 EXOSC9Q06265 439 aaKnown RBP25.27■■□□□ 1.64
CDCA4-201ENST00000336219 FTSJ3Q8IY81 847 aaKnown RBP25.27■■□□□ 1.64
CDCA4-201ENST00000336219 RRAGDQ9NQL2 400 aaPredicted RBP25.25■■□□□ 1.63
CDCA4-201ENST00000336219 SMC4Q9NTJ3 1288 aa25.25■■□□□ 1.63
CDCA4-201ENST00000336219 KIF20BQ96Q89 1820 aa25.24■■□□□ 1.63
CDCA4-201ENST00000336219 IL16Q14005 1332 aa25.24■■□□□ 1.63
CDCA4-201ENST00000336219 GZF1Q9H116 711 aaPredicted RBP25.24■■□□□ 1.63
CDCA4-201ENST00000336219 ALKQ9UM73 1620 aa25.23■■□□□ 1.63
CDCA4-201ENST00000336219 MFAP1P55081 439 aaKnown RBP25.23■■□□□ 1.63
CDCA4-201ENST00000336219 TRIM27P14373 513 aa25.22■■□□□ 1.63
CDCA4-201ENST00000336219 SSH1Q8WYL5 1049 aa25.22■■□□□ 1.63
CDCA4-201ENST00000336219 PNPLA6Q8IY17 1366 aa25.21■■□□□ 1.63
CDCA4-201ENST00000336219 ARHGEF40Q8TER5 1519 aa25.21■■□□□ 1.63
CDCA4-201ENST00000336219 DIAPH1O60610 1272 aaKnown RBP25.2■■□□□ 1.62
CDCA4-201ENST00000336219 HDGFL2Q7Z4V5 671 aaPredicted RBP25.2■■□□□ 1.62
CDCA4-201ENST00000336219 RIPK4P57078 832 aa25.19■■□□□ 1.62
CDCA4-201ENST00000336219 ATF7IPQ6VMQ6 1270 aa25.18■■□□□ 1.62
CDCA4-201ENST00000336219 CDK19Q9BWU1 502 aa25.18■■□□□ 1.62
CDCA4-201ENST00000336219 FBXO31Q5XUX0 539 aaPredicted RBP25.18■■□□□ 1.62
CDCA4-201ENST00000336219 C22orf23Q9BZE7 217 aa25.18■■□□□ 1.62
CDCA4-201ENST00000336219 DDX19BQ9UMR2 479 aa25.18■■□□□ 1.62
CDCA4-201ENST00000336219 CDC42BPGQ6DT37 1551 aa25.17■■□□□ 1.62
CDCA4-201ENST00000336219 L1TD1Q5T7N2 865 aaKnown RBP25.17■■□□□ 1.62
CDCA4-201ENST00000336219 HDAC1Q13547 482 aaPredicted RBP25.17■■□□□ 1.62
CDCA4-201ENST00000336219 MCM4P33991 863 aa25.16■■□□□ 1.62
CDCA4-201ENST00000336219 PNNQ9H307 717 aaKnown RBP25.16■■□□□ 1.62
CDCA4-201ENST00000336219 XRCC6P12956 609 aaKnown RBP eCLIP25.16■■□□□ 1.62
CDCA4-201ENST00000336219 CABP1Q9NZU7 370 aa25.16■■□□□ 1.62
CDCA4-201ENST00000336219 ITPRIPQ8IWB1 547 aa25.15■■□□□ 1.62
CDCA4-201ENST00000336219 PANK2Q9BZ23 570 aa25.15■■□□□ 1.62
CDCA4-201ENST00000336219 NOB1Q9ULX3 412 aaKnown RBP25.15■■□□□ 1.62
CDCA4-201ENST00000336219 LRRC7Q96NW7 1537 aa25.14■■□□□ 1.62
CDCA4-201ENST00000336219 RSPH6AQ9H0K4 717 aa25.13■■□□□ 1.61
CDCA4-201ENST00000336219 GOLGA6L3A6NEY3 463 aa25.11■■□□□ 1.61
CDCA4-201ENST00000336219 FCHSD2O94868 740 aa25.11■■□□□ 1.61
CDCA4-201ENST00000336219 KIF16BQ96L93 1317 aa25.11■■□□□ 1.61
CDCA4-201ENST00000336219 TMEM57Q8N5G2 664 aa25.11■■□□□ 1.61
CDCA4-201ENST00000336219 DLC1Q96QB1 1528 aa25.1■■□□□ 1.61
CDCA4-201ENST00000336219 FAM135BQ49AJ0 1406 aa25.1■■□□□ 1.61
CDCA4-201ENST00000336219 SMC5Q8IY18 1101 aa25.09■■□□□ 1.61
CDCA4-201ENST00000336219 STAG3Q9UJ98 1225 aa25.09■■□□□ 1.61
CDCA4-201ENST00000336219 ATP7BP35670 1465 aa25.09■■□□□ 1.61
CDCA4-201ENST00000336219 MAP2P11137 1827 aaKnown RBP25.08■■□□□ 1.61
CDCA4-201ENST00000336219 FSD2A1L4K1 749 aa25.08■■□□□ 1.61
CDCA4-201ENST00000336219 IPO8O15397 1037 aaKnown RBP25.08■■□□□ 1.61
CDCA4-201ENST00000336219 ZBTB40Q9NUA8 1239 aa25.08■■□□□ 1.61
CDCA4-201ENST00000336219 SETD1AO15047 1707 aaKnown RBP25.08■■□□□ 1.6
CDCA4-201ENST00000336219 ALDH1L2Q3SY69 923 aa25.08■■□□□ 1.6
CDCA4-201ENST00000336219 CHMP5Q9NZZ3 219 aa25.08■■□□□ 1.6
CDCA4-201ENST00000336219 TRAK2O60296 914 aa25.07■■□□□ 1.6
CDCA4-201ENST00000336219 POLKQ9UBT6 870 aa25.07■■□□□ 1.6
CDCA4-201ENST00000336219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.06■■□□□ 1.6
CDCA4-201ENST00000336219 PRKAR2BP31323 418 aa25.06■■□□□ 1.6
CDCA4-201ENST00000336219 RIMBP3CA6NJZ7 1639 aa25.05■■□□□ 1.6
CDCA4-201ENST00000336219 RIMBP3BA6NNM3 1639 aa25.05■■□□□ 1.6
CDCA4-201ENST00000336219 RIMBP3Q9UFD9 1639 aa25.05■■□□□ 1.6
CDCA4-201ENST00000336219 PPIP5K1Q6PFW1 1433 aa25.04■■□□□ 1.6
CDCA4-201ENST00000336219 WAPLQ7Z5K2 1190 aa25.04■■□□□ 1.6
CDCA4-201ENST00000336219 A2ML1A8K2U0 1454 aa25.04■■□□□ 1.6
CDCA4-201ENST00000336219 FBLN1P23142 703 aa25.04■■□□□ 1.6
CDCA4-201ENST00000336219 ZNF692Q9BU19 519 aaPredicted RBP25.03■■□□□ 1.6
CDCA4-201ENST00000336219 REREQ9P2R6 1566 aa25.02■■□□□ 1.6
CDCA4-201ENST00000336219 HSCBQ8IWL3 235 aa25.02■■□□□ 1.6
CDCA4-201ENST00000336219 ZNF428Q96B54 188 aa25.02■■□□□ 1.6
CDCA4-201ENST00000336219 BRPF1P55201 1214 aaPredicted RBP25.01■■□□□ 1.59
CDCA4-201ENST00000336219 LNPKQ9C0E8 428 aa25.01■■□□□ 1.59
CDCA4-201ENST00000336219 SPATA31D1Q6ZQQ2 1576 aa25■■□□□ 1.59
CDCA4-201ENST00000336219 RIMS2Q9UQ26 1411 aa25■■□□□ 1.59
CDCA4-201ENST00000336219 AGLP35573 1532 aa25■■□□□ 1.59
CDCA4-201ENST00000336219 NFE2L2Q16236 605 aa24.99■■□□□ 1.59
CDCA4-201ENST00000336219 PHACTR3Q96KR7 559 aa24.99■■□□□ 1.59
CDCA4-201ENST00000336219 UBE2Q2Q8WVN8 375 aa24.99■■□□□ 1.59
CDCA4-201ENST00000336219 PPP6R1Q9UPN7 881 aa24.98■■□□□ 1.59
CDCA4-201ENST00000336219 CPSF1Q10570 1443 aaKnown RBP24.98■■□□□ 1.59
CDCA4-201ENST00000336219 HMOX1P09601 288 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms