RNA–Protein interactions for RNA: ENST00000335727.13

TNRC6B-202, Transcript of trinucleotide repeat containing 6B, humanhuman

TSL 1 (best) BASIC

Gene TNRC6B, Length 17,933 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6B-202ENST00000335727 CHMP4CQ96CF2 233 aa6.35□□□□□ -1.39
TNRC6B-202ENST00000335727 LIMCH1Q9UPQ0 1083 aa6.35□□□□□ -1.39
TNRC6B-202ENST00000335727 TUBBP07437 444 aa6.35□□□□□ -1.39
TNRC6B-202ENST00000335727 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.35□□□□□ -1.39
TNRC6B-202ENST00000335727 PLEKHD1A6NEE1 506 aa6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 TMCO3Q6UWJ1 677 aa6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 NAP1L3Q99457 506 aaPredicted RBP6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 RSF1Q96T23 1441 aaPredicted RBP6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 ICE2Q659A1 982 aa6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 SATB2Q9UPW6 733 aa6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 ZNF280CQ8ND82 737 aa6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 ERICH4A6NGS2 130 aa6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 KIF3BO15066 747 aa6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 SMC2O95347 1197 aa6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 RPAP2Q8IXW5 612 aaPredicted RBP6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 NAT10Q9H0A0 1025 aaKnown RBP6.34□□□□□ -1.39
TNRC6B-202ENST00000335727 CCDC152Q4G0S7 254 aa6.34□□□□□ -1.4
TNRC6B-202ENST00000335727 RAD21O60216 631 aa6.34□□□□□ -1.4
TNRC6B-202ENST00000335727 PPFIA3O75145 1194 aa6.34□□□□□ -1.4
TNRC6B-202ENST00000335727 RWDD1Q9H446 243 aaPredicted RBP6.34□□□□□ -1.4
TNRC6B-202ENST00000335727 PPP1R15AO75807 674 aaPredicted RBP6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 SLMAPQ14BN4 828 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 FAM184BQ9ULE4 1060 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 LCA5Q86VQ0 697 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 BACH2Q9BYV9 841 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 IQCGQ9H095 443 aaKnown RBP6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 CCDC92Q53HC0 331 aaPredicted RBP6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 NGEFQ8N5V2 710 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 VGLL3A8MV65 326 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 PAK3O75914 559 aaPredicted RBP6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 CAVIN2O95810 425 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 MSL3Q8N5Y2 521 aaKnown RBP6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 TCEAL9Q9UHQ7 104 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 ITPRIPQ8IWB1 547 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 SPAG9O60271 1321 aaKnown RBP6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 RLBP1P12271 317 aa6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 SRRTQ9BXP5 876 aaKnown RBP6.33□□□□□ -1.4
TNRC6B-202ENST00000335727 TNNT1P13805 278 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 GTF2E1P29083 439 aaPredicted RBP6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 ARMCX6Q7L4S7 300 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 RCAN3Q9UKA8 241 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 RSPH14Q9UHP6 348 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 NUP133Q8WUM0 1156 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 ANKRD30AQ9BXX3 1397 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 MCM6Q14566 821 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 CDCA8Q53HL2 280 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 MYRIPQ8NFW9 859 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 FMNL2Q96PY5 1086 aa6.32□□□□□ -1.4
TNRC6B-202ENST00000335727 SKILP12757 684 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 TRAF1Q13077 416 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 ZNF397Q8NF99 534 aaPredicted RBP6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 NUB1Q9Y5A7 615 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 ROCK1Q13464 1354 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 CCDC144AA2RUR9 1427 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 CGNL1Q0VF96 1302 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 CCDC114Q96M63 670 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 TPX2Q9ULW0 747 aaKnown RBP6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 CXorf38Q8TB03 319 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 ZCRB1Q8TBF4 217 aaKnown RBP6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 FRAT2O75474 233 aaPredicted RBP6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 CHCHD3Q9NX63 227 aaKnown RBP6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 WRNQ14191 1432 aaPredicted RBP eCLIP6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 EIF5P55010 431 aaKnown RBP6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 GOPCQ9HD26 462 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 FBLN2P98095 1184 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 FHAD1B1AJZ9 1412 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 PPP1R12AO14974 1030 aaPredicted RBP6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 IKQ13123 557 aaPredicted RBP6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 WHAMMP3Q1A5X7 153 aa6.31□□□□□ -1.4
TNRC6B-202ENST00000335727 APLFQ8IW19 511 aaPredicted RBP6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 NOL7Q9UMY1 257 aaKnown RBP6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 NLRP5P59047 1200 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 USH1CQ9Y6N9 552 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 TSPY26PQ9H489 355 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 ARHGAP25P42331 645 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 GJC2Q5T442 439 aaPredicted RBP6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 PSMC1P62191 440 aaKnown RBP6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 DDX12PQ92771 950 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 HOMER1Q86YM7 354 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 UTP14AQ9BVJ6 771 aaKnown RBP6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 TRIM6Q9C030 488 aaPredicted RBP6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 NEDD9Q14511 834 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 DNAJC8O75937 253 aaPredicted RBP6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 CEP135Q66GS9 1140 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 KIF18AQ8NI77 898 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 CRACR2AQ9BSW2 395 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 MED4Q9NPJ6 270 aa6.3□□□□□ -1.4
TNRC6B-202ENST00000335727 NAA16Q6N069 864 aaPredicted RBP6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 ABCF2Q9UG63 623 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 KCTD17Q8N5Z5 321 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 ZFXP17010 805 aaPredicted RBP6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 TPD52L1Q16890 204 aaPredicted RBP6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 B4GALNT4Q76KP1 1039 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 OTUD6BQ8N6M0 293 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.29□□□□□ -1.45e-7■□□□□ 9.7
TNRC6B-202ENST00000335727 USP25Q9UHP3 1055 aa6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 GIGYF2Q6Y7W6 1299 aaKnown RBP6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 NBPF10Q6P3W6 841 aaKnown RBP6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 SMC1AQ14683 1233 aaKnown RBP6.29□□□□□ -1.4
TNRC6B-202ENST00000335727 LRRFIP2Q9Y608 721 aaKnown RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms