RNA–Protein interactions for RNA: ENST00000334478.8

PFDN5-202, Transcript of prefoldin subunit 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN5, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-202ENST00000334478 PHRF1Q9P1Y6 1649 aaKnown RBP21.4■■□□□ 1.02
PFDN5-202ENST00000334478 RXRBP28702 533 aa21.39■■□□□ 1.01
PFDN5-202ENST00000334478 USP21Q9UK80 565 aa21.39■■□□□ 1.01
PFDN5-202ENST00000334478 TIMELESSQ9UNS1 1208 aa21.38■■□□□ 1.01
PFDN5-202ENST00000334478 SLIT2O94813 1529 aa21.38■■□□□ 1.01
PFDN5-202ENST00000334478 AKAP12Q02952 1782 aa21.38■■□□□ 1.01
PFDN5-202ENST00000334478 PAK3O75914 559 aaPredicted RBP21.37■■□□□ 1.01
PFDN5-202ENST00000334478 QTRT2Q9H974 415 aaKnown RBP21.37■■□□□ 1.01
PFDN5-202ENST00000334478 BCL9LQ86UU0 1499 aa21.37■■□□□ 1.01
PFDN5-202ENST00000334478 ATRNO75882 1429 aa21.37■■□□□ 1.01
PFDN5-202ENST00000334478 BRD4O60885 1362 aaPredicted RBP21.36■■□□□ 1.01
PFDN5-202ENST00000334478 COL14A1Q05707 1796 aaKnown RBP21.36■■□□□ 1.01
PFDN5-202ENST00000334478 ATAD2Q6PL18 1390 aa21.36■■□□□ 1.01
PFDN5-202ENST00000334478 RBM6P78332 1123 aaKnown RBP21.35■■□□□ 1.01
PFDN5-202ENST00000334478 CABLES1Q8TDN4 633 aa21.35■■□□□ 1.01
PFDN5-202ENST00000334478 TRPC5Q9UL62 973 aaPredicted RBP21.35■■□□□ 1.01
PFDN5-202ENST00000334478 NRAPQ86VF7 1730 aa21.32■■□□□ 1
PFDN5-202ENST00000334478 USP6P35125 1406 aa21.32■■□□□ 1
PFDN5-202ENST00000334478 NRKQ7Z2Y5 1582 aa21.31■■□□□ 1
PFDN5-202ENST00000334478 RGS12O14924 1447 aa21.31■■□□□ 1
PFDN5-202ENST00000334478 PLEKHG5O94827 1062 aa21.31■■□□□ 1
PFDN5-202ENST00000334478 CABP1Q9NZU7 370 aa21.31■■□□□ 1
PFDN5-202ENST00000334478 MON2Q7Z3U7 1717 aa21.31■■□□□ 1
PFDN5-202ENST00000334478 UNC5CLQ8IV45 518 aa21.29■■□□□ 1
PFDN5-202ENST00000334478 PIK3C2AO00443 1686 aa21.28■■□□□ 1
PFDN5-202ENST00000334478 CCER1Q8TC90 406 aaPredicted RBP21.27■■□□□ 1
PFDN5-202ENST00000334478 GLI3P10071 1580 aa21.27■□□□□ 0.99
PFDN5-202ENST00000334478 SLC24A1O60721 1099 aa21.26■□□□□ 0.99
PFDN5-202ENST00000334478 ABTB2Q8N961 1025 aa21.26■□□□□ 0.99
PFDN5-202ENST00000334478 CPSF1Q10570 1443 aaKnown RBP21.26■□□□□ 0.99
PFDN5-202ENST00000334478 SSH2Q76I76 1423 aa21.26■□□□□ 0.99
PFDN5-202ENST00000334478 USP47Q96K76 1375 aa21.25■□□□□ 0.99
PFDN5-202ENST00000334478 USP19O94966 1318 aa21.25■□□□□ 0.99
PFDN5-202ENST00000334478 ST20-MTHFSA0A0A6YYL1 179 aa21.24■□□□□ 0.99
PFDN5-202ENST00000334478 FAM83GA6ND36 823 aa21.24■□□□□ 0.99
PFDN5-202ENST00000334478 GJD4Q96KN9 370 aaPredicted RBP21.24■□□□□ 0.99
PFDN5-202ENST00000334478 PUS7Q96PZ0 661 aaKnown RBP21.24■□□□□ 0.99
PFDN5-202ENST00000334478 ZNF692Q9BU19 519 aaPredicted RBP21.24■□□□□ 0.99
PFDN5-202ENST00000334478 NLRP13Q86W25 1043 aa21.23■□□□□ 0.99
PFDN5-202ENST00000334478 NUTM2GQ5VZR2 741 aa21.22■□□□□ 0.99
PFDN5-202ENST00000334478 TESK2Q96S53 571 aa21.22■□□□□ 0.99
PFDN5-202ENST00000334478 PRDM11Q9NQV5 511 aa21.22■□□□□ 0.99
PFDN5-202ENST00000334478 SLIT3O75094 1523 aa21.22■□□□□ 0.99
PFDN5-202ENST00000334478 USP54Q70EL1 1684 aa21.21■□□□□ 0.99
PFDN5-202ENST00000334478 VPS72Q15906 364 aa21.21■□□□□ 0.99
PFDN5-202ENST00000334478 KTN1Q86UP2 1357 aaKnown RBP21.21■□□□□ 0.99
PFDN5-202ENST00000334478 KIAA0232Q92628 1395 aa21.21■□□□□ 0.99
PFDN5-202ENST00000334478 NINLQ9Y2I6 1382 aa21.21■□□□□ 0.99
PFDN5-202ENST00000334478 CD163L1Q9NR16 1453 aa21.2■□□□□ 0.98
PFDN5-202ENST00000334478 LMO7Q8WWI1 1683 aa21.2■□□□□ 0.98
PFDN5-202ENST00000334478 TTC21AQ8NDW8 1320 aa21.2■□□□□ 0.98
PFDN5-202ENST00000334478 CPDO75976 1380 aa21.2■□□□□ 0.98
PFDN5-202ENST00000334478 BTG4Q9NY30 223 aa21.19■□□□□ 0.98
PFDN5-202ENST00000334478 TTC21BQ7Z4L5 1316 aa21.17■□□□□ 0.98
PFDN5-202ENST00000334478 BRWD3Q6RI45 1802 aa21.17■□□□□ 0.98
PFDN5-202ENST00000334478 NLRP6P59044 892 aa21.16■□□□□ 0.98
PFDN5-202ENST00000334478 GCP02774 474 aa21.15■□□□□ 0.98
PFDN5-202ENST00000334478 ZC3H6P61129 1189 aaKnown RBP21.15■□□□□ 0.98
PFDN5-202ENST00000334478 TMC1Q8TDI8 760 aa21.15■□□□□ 0.98
PFDN5-202ENST00000334478 EDC4Q6P2E9 1401 aaKnown RBP21.14■□□□□ 0.98
PFDN5-202ENST00000334478 TMF1P82094 1093 aa21.14■□□□□ 0.97
PFDN5-202ENST00000334478 HDGFL2Q7Z4V5 671 aaPredicted RBP21.14■□□□□ 0.97
PFDN5-202ENST00000334478 TERF2IPQ9NYB0 399 aa21.14■□□□□ 0.97
PFDN5-202ENST00000334478 CCDC9Q9Y3X0 531 aaKnown RBP21.14■□□□□ 0.97
PFDN5-202ENST00000334478 A0A1W2PP64 1363 aa21.13■□□□□ 0.97
PFDN5-202ENST00000334478 CHRNA2Q15822 529 aa21.12■□□□□ 0.97
PFDN5-202ENST00000334478 UPF1Q92900 1129 aaKnown RBP eCLIP21.12■□□□□ 0.97
PFDN5-202ENST00000334478 SLC12A5Q9H2X9 1139 aa21.12■□□□□ 0.97
PFDN5-202ENST00000334478 EP400Q96L91 3159 aa21.12■□□□□ 0.97
PFDN5-202ENST00000334478 CAMTA1Q9Y6Y1 1673 aa21.12■□□□□ 0.97
PFDN5-202ENST00000334478 THSD7AQ9UPZ6 1657 aa21.11■□□□□ 0.97
PFDN5-202ENST00000334478 COL18A1P39060 1754 aa21.1■□□□□ 0.97
PFDN5-202ENST00000334478 NFAT5O94916 1531 aa21.1■□□□□ 0.97
PFDN5-202ENST00000334478 MYOM1P52179 1685 aa21.1■□□□□ 0.97
PFDN5-202ENST00000334478 CDCA8Q53HL2 280 aa21.1■□□□□ 0.97
PFDN5-202ENST00000334478 ABCC6O95255 1503 aa21.09■□□□□ 0.97
PFDN5-202ENST00000334478 SPATA31A5Q5VU36 1347 aa21.09■□□□□ 0.97
PFDN5-202ENST00000334478 SPATA31A7Q8IWB4 1347 aa21.09■□□□□ 0.97
PFDN5-202ENST00000334478 ONECUT3O60422 494 aaPredicted RBP21.09■□□□□ 0.97
PFDN5-202ENST00000334478 KCNH5Q8NCM2 988 aa21.09■□□□□ 0.97
PFDN5-202ENST00000334478 USP31Q70CQ4 1352 aa21.09■□□□□ 0.97
PFDN5-202ENST00000334478 AATKQ6ZMQ8 1374 aa21.08■□□□□ 0.96
PFDN5-202ENST00000334478 LTN1O94822 1766 aa21.08■□□□□ 0.96
PFDN5-202ENST00000334478 COL5A2P05997 1499 aaPredicted RBP21.07■□□□□ 0.96
PFDN5-202ENST00000334478 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.07■□□□□ 0.96
PFDN5-202ENST00000334478 SEPT12Q8IYM1 358 aa21.07■□□□□ 0.96
PFDN5-202ENST00000334478 ANKRD36BQ8N2N9 1353 aa21.07■□□□□ 0.96
PFDN5-202ENST00000334478 RGPD5Q99666 1765 aa21.06■□□□□ 0.96
PFDN5-202ENST00000334478 STRN4Q9NRL3 753 aa21.06■□□□□ 0.96
PFDN5-202ENST00000334478 SPATA31A1Q5TZJ5 1347 aa21.05■□□□□ 0.96
PFDN5-202ENST00000334478 OVOS2A0A0J9YW53 1432 aa21.04■□□□□ 0.96
PFDN5-202ENST00000334478 OVOS2Q6IE36 1432 aa21.04■□□□□ 0.96
PFDN5-202ENST00000334478 EVA1CP58658 441 aa21.04■□□□□ 0.96
PFDN5-202ENST00000334478 FAM98CQ17RN3 349 aaKnown RBP21.04■□□□□ 0.96
PFDN5-202ENST00000334478 KIF20BQ96Q89 1820 aa21.04■□□□□ 0.96
PFDN5-202ENST00000334478 NME9Q86XW9 330 aa21.03■□□□□ 0.96
PFDN5-202ENST00000334478 WNK3Q9BYP7 1800 aa21.02■□□□□ 0.96
PFDN5-202ENST00000334478 A0A0G2JS52 829 aa21.02■□□□□ 0.96
PFDN5-202ENST00000334478 MYT1Q01538 1121 aa21.02■□□□□ 0.96
PFDN5-202ENST00000334478 EIF4G2P78344 907 aaKnown RBP eCLIP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms