RNA–Protein interactions for RNA: ENST00000334352.8

USP16-201, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP16, Length 3,004 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-201ENST00000334352 USP21Q9UK80 565 aa9.37□□□□□ -0.91
USP16-201ENST00000334352 PRAM1Q96QH2 718 aa9.37□□□□□ -0.91
USP16-201ENST00000334352 GJD4Q96KN9 370 aaPredicted RBP9.36□□□□□ -0.91
USP16-201ENST00000334352 PRR36Q9H6K5 1346 aa9.36□□□□□ -0.91
USP16-201ENST00000334352 PARD3Q8TEW0 1356 aa9.36□□□□□ -0.91
USP16-201ENST00000334352 PIK3C2AO00443 1686 aa9.36□□□□□ -0.91
USP16-201ENST00000334352 TMEM132EQ6IEE7 984 aa9.34□□□□□ -0.91
USP16-201ENST00000334352 PPARGC1BQ86YN6 1023 aaKnown RBP9.34□□□□□ -0.91
USP16-201ENST00000334352 CPSF1Q10570 1443 aaKnown RBP9.34□□□□□ -0.91
USP16-201ENST00000334352 COL24A1Q17RW2 1714 aa9.34□□□□□ -0.91
USP16-201ENST00000334352 QSER1Q2KHR3 1735 aa9.33□□□□□ -0.92
USP16-201ENST00000334352 USP31Q70CQ4 1352 aa9.33□□□□□ -0.92
USP16-201ENST00000334352 NINLQ9Y2I6 1382 aa9.33□□□□□ -0.92
USP16-201ENST00000334352 SLC24A1O60721 1099 aa9.33□□□□□ -0.92
USP16-201ENST00000334352 RGL3Q3MIN7 710 aa9.33□□□□□ -0.92
USP16-201ENST00000334352 BARGINQ6ZT62 677 aa9.33□□□□□ -0.92
USP16-201ENST00000334352 NFAT5O94916 1531 aa9.32□□□□□ -0.92
USP16-201ENST00000334352 C8orf37Q96NL8 207 aa9.32□□□□□ -0.92
USP16-201ENST00000334352 THRAP3Q9Y2W1 955 aaKnown RBP9.32□□□□□ -0.92
USP16-201ENST00000334352 SPATA31A5Q5VU36 1347 aa9.32□□□□□ -0.92
USP16-201ENST00000334352 SPATA31A7Q8IWB4 1347 aa9.32□□□□□ -0.92
USP16-201ENST00000334352 USP6P35125 1406 aa9.31□□□□□ -0.92
USP16-201ENST00000334352 NUP188Q5SRE5 1749 aa9.31□□□□□ -0.92
USP16-201ENST00000334352 POGKQ9P215 609 aa9.31□□□□□ -0.92
USP16-201ENST00000334352 FOXO3O43524 673 aa9.31□□□□□ -0.92
USP16-201ENST00000334352 DDX17Q92841 729 aaKnown RBP9.31□□□□□ -0.92
USP16-201ENST00000334352 CCDC61Q9Y6R9 512 aa9.31□□□□□ -0.92
USP16-201ENST00000334352 LRRC37A3O60309 1634 aa9.31□□□□□ -0.92
USP16-201ENST00000334352 SBF2Q86WG5 1849 aa9.31□□□□□ -0.92
USP16-201ENST00000334352 DCAF11Q8TEB1 546 aa9.3□□□□□ -0.92
USP16-201ENST00000334352 AATKQ6ZMQ8 1374 aa9.3□□□□□ -0.92
USP16-201ENST00000334352 PLEKHG2Q9H7P9 1386 aa9.3□□□□□ -0.92
USP16-201ENST00000334352 CAMTA1Q9Y6Y1 1673 aa9.3□□□□□ -0.92
USP16-201ENST00000334352 TTC21AQ8NDW8 1320 aa9.3□□□□□ -0.92
USP16-201ENST00000334352 NUDT16Q96DE0 195 aaKnown RBP9.3□□□□□ -0.92
USP16-201ENST00000334352 NUTM2BA6NNL0 878 aaPredicted RBP9.29□□□□□ -0.92
USP16-201ENST00000334352 NUTM2EB1AL46 878 aaPredicted RBP9.29□□□□□ -0.92
USP16-201ENST00000334352 NUTM2AQ8IVF1 878 aaPredicted RBP9.29□□□□□ -0.92
USP16-201ENST00000334352 STK26Q9P289 416 aa9.29□□□□□ -0.92
USP16-201ENST00000334352 CENPJQ9HC77 1338 aaPredicted RBP9.29□□□□□ -0.92
USP16-201ENST00000334352 PPIP5K1Q6PFW1 1433 aa9.28□□□□□ -0.92
USP16-201ENST00000334352 ZNF692Q9BU19 519 aaPredicted RBP9.28□□□□□ -0.92
USP16-201ENST00000334352 CDK19Q9BWU1 502 aa9.28□□□□□ -0.92
USP16-201ENST00000334352 ANKRD26Q9UPS8 1709 aa9.27□□□□□ -0.92
USP16-201ENST00000334352 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.93
USP16-201ENST00000334352 COL5A2P05997 1499 aaPredicted RBP9.27□□□□□ -0.93
USP16-201ENST00000334352 SPATA31A1Q5TZJ5 1347 aa9.27□□□□□ -0.93
USP16-201ENST00000334352 NHSQ6T4R5 1651 aa9.27□□□□□ -0.93
USP16-201ENST00000334352 CD163L1Q9NR16 1453 aa9.27□□□□□ -0.93
USP16-201ENST00000334352 FAM83GA6ND36 823 aa9.27□□□□□ -0.93
USP16-201ENST00000334352 CLSPNQ9HAW4 1339 aa9.27□□□□□ -0.93
USP16-201ENST00000334352 NBPF8Q3BBV2 869 aa9.26□□□□□ -0.93
USP16-201ENST00000334352 CASZ1Q86V15 1759 aa9.26□□□□□ -0.93
USP16-201ENST00000334352 CDCA7Q9BWT1 371 aaPredicted RBP9.25□□□□□ -0.93
USP16-201ENST00000334352 TRAK1Q9UPV9 953 aa9.25□□□□□ -0.93
USP16-201ENST00000334352 EVC2Q86UK5 1308 aa9.25□□□□□ -0.93
USP16-201ENST00000334352 ACEP12821 1306 aa9.25□□□□□ -0.93
USP16-201ENST00000334352 ADAMTS2O95450 1211 aa9.24□□□□□ -0.93
USP16-201ENST00000334352 CRB1P82279 1406 aa9.24□□□□□ -0.93
USP16-201ENST00000334352 PAPPAQ13219 1627 aa9.23□□□□□ -0.93
USP16-201ENST00000334352 EDC4Q6P2E9 1401 aaKnown RBP9.23□□□□□ -0.93
USP16-201ENST00000334352 LTN1O94822 1766 aa9.23□□□□□ -0.93
USP16-201ENST00000334352 KRT27Q7Z3Y8 459 aa9.23□□□□□ -0.93
USP16-201ENST00000334352 SEPT12Q8IYM1 358 aa9.23□□□□□ -0.93
USP16-201ENST00000334352 NLRP13Q86W25 1043 aa9.23□□□□□ -0.93
USP16-201ENST00000334352 KIF24Q5T7B8 1368 aa9.22□□□□□ -0.93
USP16-201ENST00000334352 MINK1Q8N4C8 1332 aaPredicted RBP9.22□□□□□ -0.93
USP16-201ENST00000334352 KIF20BQ96Q89 1820 aa9.22□□□□□ -0.93
USP16-201ENST00000334352 CCDC7Q96M83 1385 aa9.22□□□□□ -0.93
USP16-201ENST00000334352 KCNH5Q8NCM2 988 aa9.21□□□□□ -0.93
USP16-201ENST00000334352 L3MBTL2Q969R5 705 aa9.21□□□□□ -0.93
USP16-201ENST00000334352 OVOS2A0A0J9YW53 1432 aa9.21□□□□□ -0.93
USP16-201ENST00000334352 OVOS2Q6IE36 1432 aa9.21□□□□□ -0.93
USP16-201ENST00000334352 KIAA0232Q92628 1395 aa9.21□□□□□ -0.93
USP16-201ENST00000334352 NGDNQ8NEJ9 315 aaKnown RBP9.21□□□□□ -0.94
USP16-201ENST00000334352 ZNF831Q5JPB2 1677 aa9.2□□□□□ -0.94
USP16-201ENST00000334352 NCAPD2Q15021 1401 aa9.2□□□□□ -0.94
USP16-201ENST00000334352 ZRANB1Q9UGI0 708 aa9.2□□□□□ -0.94
USP16-201ENST00000334352 RGPD5Q99666 1765 aa9.2□□□□□ -0.94
USP16-201ENST00000334352 MYOM1P52179 1685 aa9.2□□□□□ -0.94
USP16-201ENST00000334352 NBPF1Q3BBV0 1214 aa9.2□□□□□ -0.94
USP16-201ENST00000334352 FAM196AQ6ZSG2 479 aa9.2□□□□□ -0.94
USP16-201ENST00000334352 SHANK3Q9BYB0 1731 aa9.2□□□□□ -0.94
USP16-201ENST00000334352 RTL1A6NKG5 1358 aa9.2□□□□□ -0.94
USP16-201ENST00000334352 ROCK2O75116 1388 aaKnown RBP9.19□□□□□ -0.94
USP16-201ENST00000334352 SENP3Q9H4L4 574 aaPredicted RBP9.19□□□□□ -0.94
USP16-201ENST00000334352 BTG4Q9NY30 223 aa9.18□□□□□ -0.94
USP16-201ENST00000334352 TTC21BQ7Z4L5 1316 aa9.18□□□□□ -0.94
USP16-201ENST00000334352 PMFBP1Q8TBY8 1022 aa9.18□□□□□ -0.94
USP16-201ENST00000334352 TNS2Q63HR2 1409 aa9.18□□□□□ -0.94
USP16-201ENST00000334352 CICQ96RK0 1608 aaPredicted RBP9.18□□□□□ -0.94
USP16-201ENST00000334352 ARHGEF25Q86VW2 580 aa9.18□□□□□ -0.94
USP16-201ENST00000334352 OVOS2A0A0G2JMS6 1433 aa9.18□□□□□ -0.94
USP16-201ENST00000334352 LY75O60449 1722 aa9.17□□□□□ -0.94
USP16-201ENST00000334352 PKD1L3Q7Z443 1732 aa9.17□□□□□ -0.94
USP16-201ENST00000334352 TCP11L2Q8N4U5 519 aa9.17□□□□□ -0.94
USP16-201ENST00000334352 KDM2AQ9Y2K7 1162 aa9.17□□□□□ -0.94
USP16-201ENST00000334352 BAG6P46379 1132 aa9.17□□□□□ -0.94
USP16-201ENST00000334352 XPCQ01831 940 aaPredicted RBP9.17□□□□□ -0.94
USP16-201ENST00000334352 CAMKK2Q96RR4 588 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms