RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.68□□□□□ -0.06
LIMK2-202ENST00000333611 DUOX2Q9NRD8 1548 aa14.68□□□□□ -0.06
LIMK2-202ENST00000333611 NOB1Q9ULX3 412 aaKnown RBP14.67□□□□□ -0.06
LIMK2-202ENST00000333611 SSH1Q8WYL5 1049 aa14.67□□□□□ -0.06
LIMK2-202ENST00000333611 UGGT1Q9NYU2 1555 aa14.67□□□□□ -0.06
LIMK2-202ENST00000333611 DMTNQ08495 405 aa14.67□□□□□ -0.06
LIMK2-202ENST00000333611 KCNJ4P48050 445 aa14.66□□□□□ -0.06
LIMK2-202ENST00000333611 IPO4Q8TEX9 1081 aaKnown RBP14.66□□□□□ -0.06
LIMK2-202ENST00000333611 ANTXR1Q9H6X2 564 aa14.66□□□□□ -0.06
LIMK2-202ENST00000333611 TRIM27P14373 513 aa14.66□□□□□ -0.06
LIMK2-202ENST00000333611 TNPO1Q92973 898 aaKnown RBP14.66□□□□□ -0.06
LIMK2-202ENST00000333611 MAST1Q9Y2H9 1570 aa14.66□□□□□ -0.06
LIMK2-202ENST00000333611 PREX2Q70Z35 1606 aa14.66□□□□□ -0.06
LIMK2-202ENST00000333611 APBB1O00213 710 aa14.65□□□□□ -0.06
LIMK2-202ENST00000333611 FBLN1P23142 703 aa14.65□□□□□ -0.06
LIMK2-202ENST00000333611 FOXD4L6Q3SYB3 417 aaPredicted RBP14.65□□□□□ -0.06
LIMK2-202ENST00000333611 FOXD4L3Q6VB84 417 aaPredicted RBP14.65□□□□□ -0.06
LIMK2-202ENST00000333611 TMEM57Q8N5G2 664 aa14.65□□□□□ -0.06
LIMK2-202ENST00000333611 CCDC94Q9BW85 323 aaPredicted RBP14.65□□□□□ -0.06
LIMK2-202ENST00000333611 MTERF4Q7Z6M4 381 aaKnown RBP14.65□□□□□ -0.06
LIMK2-202ENST00000333611 ANKRD45Q5TZF3 282 aa14.64□□□□□ -0.07
LIMK2-202ENST00000333611 ATP10AO60312 1499 aa14.64□□□□□ -0.07
LIMK2-202ENST00000333611 WDR63Q8IWG1 891 aa14.64□□□□□ -0.07
LIMK2-202ENST00000333611 ERICH4A6NGS2 130 aa14.64□□□□□ -0.07
LIMK2-202ENST00000333611 MCTP1Q6DN14 999 aa14.63□□□□□ -0.07
LIMK2-202ENST00000333611 MINK1Q8N4C8 1332 aaPredicted RBP14.63□□□□□ -0.07
LIMK2-202ENST00000333611 NGEFQ8N5V2 710 aa14.63□□□□□ -0.07
LIMK2-202ENST00000333611 NOS1P29475 1434 aa14.63□□□□□ -0.07
LIMK2-202ENST00000333611 THUMPD2Q9BTF0 503 aaKnown RBP14.62□□□□□ -0.07
LIMK2-202ENST00000333611 ERVK-7P63135 1459 aa14.62□□□□□ -0.07
LIMK2-202ENST00000333611 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.62□□□□□ -0.07
LIMK2-202ENST00000333611 CFAP65Q6ZU64 1925 aaKnown RBP14.62□□□□□ -0.07
LIMK2-202ENST00000333611 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.61□□□□□ -0.07
LIMK2-202ENST00000333611 DYNC1I1O14576 645 aa14.61□□□□□ -0.07
LIMK2-202ENST00000333611 ZFP91Q96JP5 570 aaPredicted RBP14.61□□□□□ -0.07
LIMK2-202ENST00000333611 DDX19BQ9UMR2 479 aa14.61□□□□□ -0.07
LIMK2-202ENST00000333611 UNC13BO14795 1591 aa14.61□□□□□ -0.07
LIMK2-202ENST00000333611 POLR3AO14802 1390 aaPredicted RBP14.61□□□□□ -0.07
LIMK2-202ENST00000333611 SYNMO15061 1565 aa14.61□□□□□ -0.07
LIMK2-202ENST00000333611 IQGAP3Q86VI3 1631 aa14.61□□□□□ -0.07
LIMK2-202ENST00000333611 ATF7IPQ6VMQ6 1270 aa14.61□□□□□ -0.07
LIMK2-202ENST00000333611 NINLQ9Y2I6 1382 aa14.61□□□□□ -0.07
LIMK2-202ENST00000333611 PLCH2O75038 1416 aa14.61□□□□□ -0.07
LIMK2-202ENST00000333611 HMOX1P09601 288 aa14.6□□□□□ -0.07
LIMK2-202ENST00000333611 ZSCAN20P17040 1043 aaPredicted RBP14.6□□□□□ -0.07
LIMK2-202ENST00000333611 SASS6Q6UVJ0 657 aa14.6□□□□□ -0.07
LIMK2-202ENST00000333611 TMPOP42166 694 aaKnown RBP14.6□□□□□ -0.07
LIMK2-202ENST00000333611 ABCC2Q92887 1545 aa14.6□□□□□ -0.07
LIMK2-202ENST00000333611 TMEM51Q9NW97 253 aa14.6□□□□□ -0.07
LIMK2-202ENST00000333611 TNNT3P45378 269 aaPredicted RBP14.59□□□□□ -0.07
LIMK2-202ENST00000333611 C17orf53Q8N3J3 647 aaPredicted RBP14.59□□□□□ -0.07
LIMK2-202ENST00000333611 MADDQ8WXG6 1647 aa14.59□□□□□ -0.07
LIMK2-202ENST00000333611 ERCC6L2Q5T890 1561 aa14.59□□□□□ -0.07
LIMK2-202ENST00000333611 NPC1L1Q9UHC9 1359 aa14.59□□□□□ -0.07
LIMK2-202ENST00000333611 CSPP1Q1MSJ5 1256 aa14.59□□□□□ -0.07
LIMK2-202ENST00000333611 KLHL34Q8N239 644 aa14.59□□□□□ -0.07
LIMK2-202ENST00000333611 RBM42Q9BTD8 480 aaKnown RBP14.59□□□□□ -0.07
LIMK2-202ENST00000333611 SSFA2P28290 1259 aa14.58□□□□□ -0.07
LIMK2-202ENST00000333611 EVC2Q86UK5 1308 aa14.58□□□□□ -0.08
LIMK2-202ENST00000333611 KIAA2012Q0VF49 1180 aa14.57□□□□□ -0.08
LIMK2-202ENST00000333611 RBM27Q9P2N5 1060 aaKnown RBP14.57□□□□□ -0.08
LIMK2-202ENST00000333611 SKOR2Q2VWA4 1001 aaPredicted RBP14.57□□□□□ -0.08
LIMK2-202ENST00000333611 DHX37Q8IY37 1157 aaKnown RBP14.57□□□□□ -0.08
LIMK2-202ENST00000333611 KDM5AP29375 1690 aaKnown RBP14.56□□□□□ -0.08
LIMK2-202ENST00000333611 IPO8O15397 1037 aaKnown RBP14.56□□□□□ -0.08
LIMK2-202ENST00000333611 U2AF2P26368 475 aaKnown RBP eCLIP14.56□□□□□ -0.088e-7■■□□□ 13.2
LIMK2-202ENST00000333611 CLTCL1P53675 1640 aa14.56□□□□□ -0.08
LIMK2-202ENST00000333611 ATP2B3Q16720 1220 aa14.56□□□□□ -0.08
LIMK2-202ENST00000333611 PDCL2Q8N4E4 241 aa14.56□□□□□ -0.08
LIMK2-202ENST00000333611 LAMC1P11047 1609 aa14.55□□□□□ -0.08
LIMK2-202ENST00000333611 PTPRTO14522 1441 aa14.55□□□□□ -0.08
LIMK2-202ENST00000333611 STAG3Q9UJ98 1225 aa14.54□□□□□ -0.08
LIMK2-202ENST00000333611 LETM1O95202 739 aaPredicted RBP14.54□□□□□ -0.08
LIMK2-202ENST00000333611 DIAPH1O60610 1272 aaKnown RBP14.53□□□□□ -0.08
LIMK2-202ENST00000333611 PRKAR2BP31323 418 aa14.53□□□□□ -0.08
LIMK2-202ENST00000333611 CHD1LQ86WJ1 897 aa14.53□□□□□ -0.08
LIMK2-202ENST00000333611 CHMP4CQ96CF2 233 aa14.53□□□□□ -0.08
LIMK2-202ENST00000333611 ISY1Q9ULR0 285 aaKnown RBP14.53□□□□□ -0.08
LIMK2-202ENST00000333611 PRPF40AO75400 957 aaKnown RBP14.53□□□□□ -0.08
LIMK2-202ENST00000333611 NLRP1Q9C000 1473 aa14.53□□□□□ -0.08
LIMK2-202ENST00000333611 KIF20AO95235 890 aa14.52□□□□□ -0.08
LIMK2-202ENST00000333611 CLASP1Q7Z460 1538 aa14.52□□□□□ -0.09
LIMK2-202ENST00000333611 GTPBP4Q9BZE4 634 aaKnown RBP14.52□□□□□ -0.09
LIMK2-202ENST00000333611 TRIM35Q9UPQ4 493 aa14.52□□□□□ -0.09
LIMK2-202ENST00000333611 RNF17Q9BXT8 1623 aaKnown RBP14.51□□□□□ -0.09
LIMK2-202ENST00000333611 SOX12O15370 315 aa14.51□□□□□ -0.09
LIMK2-202ENST00000333611 CHAF1AQ13111 956 aaPredicted RBP14.51□□□□□ -0.09
LIMK2-202ENST00000333611 UTP14CQ5TAP6 766 aaKnown RBP14.51□□□□□ -0.09
LIMK2-202ENST00000333611 RBSNQ9H1K0 784 aa14.51□□□□□ -0.09
LIMK2-202ENST00000333611 IQGAP1P46940 1657 aa14.51□□□□□ -0.09
LIMK2-202ENST00000333611 SYCE3A1L190 88 aa14.51□□□□□ -0.09
LIMK2-202ENST00000333611 CD2BP2O95400 341 aaKnown RBP14.51□□□□□ -0.09
LIMK2-202ENST00000333611 C14orf93Q9H972 538 aaKnown RBP14.51□□□□□ -0.09
LIMK2-202ENST00000333611 ZKSCAN5Q9Y2L8 839 aa14.51□□□□□ -0.09
LIMK2-202ENST00000333611 TRPM2O94759 1503 aa14.51□□□□□ -0.09
LIMK2-202ENST00000333611 PRIM1P49642 420 aaKnown RBP14.5□□□□□ -0.09
LIMK2-202ENST00000333611 IRX3P78415 501 aaPredicted RBP14.5□□□□□ -0.09
LIMK2-202ENST00000333611 KIF3AQ9Y496 699 aa14.5□□□□□ -0.09
LIMK2-202ENST00000333611 PLXNC1O60486 1568 aa14.5□□□□□ -0.09
LIMK2-202ENST00000333611 TRIM6-TRIM34B2RNG4 842 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms