RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 TMEM57Q8N5G2 664 aa29.72■■■□□ 2.35
TSKU-201ENST00000333090 POGZQ7Z3K3 1410 aa29.72■■■□□ 2.35
TSKU-201ENST00000333090 FRMPD1Q5SYB0 1578 aa29.72■■■□□ 2.35
TSKU-201ENST00000333090 ADGRB2O60241 1585 aa29.71■■■□□ 2.35
TSKU-201ENST00000333090 CABP2Q9NPB3 220 aa29.71■■■□□ 2.35
TSKU-201ENST00000333090 TRIM35Q9UPQ4 493 aa29.71■■■□□ 2.35
TSKU-201ENST00000333090 NSD2O96028 1365 aa29.7■■■□□ 2.35
TSKU-201ENST00000333090 ZNF692Q9BU19 519 aaPredicted RBP29.7■■■□□ 2.34
TSKU-201ENST00000333090 DDX11L8A8MPP1 907 aa29.69■■■□□ 2.34
TSKU-201ENST00000333090 MRE11P49959 708 aa29.69■■■□□ 2.34
TSKU-201ENST00000333090 PLEKHF1Q96S99 279 aa29.69■■■□□ 2.34
TSKU-201ENST00000333090 PNNQ9H307 717 aaKnown RBP29.67■■■□□ 2.34
TSKU-201ENST00000333090 LNPKQ9C0E8 428 aa29.67■■■□□ 2.34
TSKU-201ENST00000333090 ZBTB40Q9NUA8 1239 aa29.67■■■□□ 2.34
TSKU-201ENST00000333090 GGNBP2Q9H3C7 697 aa29.65■■■□□ 2.34
TSKU-201ENST00000333090 NAP1L5Q96NT1 182 aaPredicted RBP29.65■■■□□ 2.34
TSKU-201ENST00000333090 STK26Q9P289 416 aa29.65■■■□□ 2.34
TSKU-201ENST00000333090 CLCN1P35523 988 aa29.64■■■□□ 2.34
TSKU-201ENST00000333090 PPLO60437 1756 aa29.64■■■□□ 2.33
TSKU-201ENST00000333090 GRPEL1Q9HAV7 217 aa29.64■■■□□ 2.33
TSKU-201ENST00000333090 RBM25P49756 843 aaKnown RBP29.63■■■□□ 2.33
TSKU-201ENST00000333090 LMTK2Q8IWU2 1503 aa29.62■■■□□ 2.33
TSKU-201ENST00000333090 TULP4Q9NRJ4 1543 aa29.62■■■□□ 2.33
TSKU-201ENST00000333090 RIPK4P57078 832 aa29.62■■■□□ 2.33
TSKU-201ENST00000333090 NUCB1Q02818 461 aa29.62■■■□□ 2.33
TSKU-201ENST00000333090 PUS7Q96PZ0 661 aaKnown RBP29.61■■■□□ 2.33
TSKU-201ENST00000333090 KIF16BQ96L93 1317 aa29.61■■■□□ 2.33
TSKU-201ENST00000333090 ABCC11Q96J66 1382 aa29.61■■■□□ 2.33
TSKU-201ENST00000333090 IPO8O15397 1037 aaKnown RBP29.61■■■□□ 2.33
TSKU-201ENST00000333090 NCOA3Q9Y6Q9 1424 aa29.61■■■□□ 2.33
TSKU-201ENST00000333090 DDIT3P35638 169 aa29.6■■■□□ 2.33
TSKU-201ENST00000333090 HSP90AB1P08238 724 aaKnown RBP29.6■■■□□ 2.33
TSKU-201ENST00000333090 TNPO1Q92973 898 aaKnown RBP29.59■■■□□ 2.33
TSKU-201ENST00000333090 SNX21Q969T3 373 aa29.59■■■□□ 2.33
TSKU-201ENST00000333090 RPGRIP1LQ68CZ1 1315 aa29.59■■■□□ 2.33
TSKU-201ENST00000333090 A0A1W2PP64 1363 aa29.59■■■□□ 2.33
TSKU-201ENST00000333090 CHD1LQ86WJ1 897 aa29.58■■■□□ 2.33
TSKU-201ENST00000333090 IL16Q14005 1332 aa29.58■■■□□ 2.33
TSKU-201ENST00000333090 IDI1Q13907 227 aa29.58■■■□□ 2.33
TSKU-201ENST00000333090 SRPK2P78362 688 aaKnown RBP29.57■■■□□ 2.32
TSKU-201ENST00000333090 GLI2P10070 1586 aa29.57■■■□□ 2.32
TSKU-201ENST00000333090 MLH3Q9UHC1 1453 aa29.57■■■□□ 2.32
TSKU-201ENST00000333090 ABCC3O15438 1527 aa29.56■■■□□ 2.32
TSKU-201ENST00000333090 HECW2Q9P2P5 1572 aa29.56■■■□□ 2.32
TSKU-201ENST00000333090 HSP90AA1P07900 732 aaKnown RBP29.54■■■□□ 2.32
TSKU-201ENST00000333090 CYB5RLQ6IPT4 315 aa29.54■■■□□ 2.32
TSKU-201ENST00000333090 GBP4Q96PP9 640 aa29.53■■■□□ 2.32
TSKU-201ENST00000333090 FOXD4L1Q9NU39 408 aa29.53■■■□□ 2.32
TSKU-201ENST00000333090 SIGLEC1Q9BZZ2 1709 aa29.53■■■□□ 2.32
TSKU-201ENST00000333090 ISY1Q9ULR0 285 aaKnown RBP29.53■■■□□ 2.32
TSKU-201ENST00000333090 YEATS2Q9ULM3 1422 aa29.53■■■□□ 2.32
TSKU-201ENST00000333090 COL3A1P02461 1466 aaPredicted RBP29.52■■■□□ 2.32
TSKU-201ENST00000333090 VGFO15240 615 aaPredicted RBP29.51■■■□□ 2.32
TSKU-201ENST00000333090 BMP2KLQ5H9B9 411 aa29.51■■■□□ 2.32
TSKU-201ENST00000333090 ANKRD45Q5TZF3 282 aa29.51■■■□□ 2.32
TSKU-201ENST00000333090 CIZ1Q9ULV3 898 aaPredicted RBP29.51■■■□□ 2.32
TSKU-201ENST00000333090 FBXO31Q5XUX0 539 aaPredicted RBP29.51■■■□□ 2.31
TSKU-201ENST00000333090 ARHGEF28Q8N1W1 1705 aaKnown RBP29.5■■■□□ 2.31
TSKU-201ENST00000333090 DIAPH1O60610 1272 aaKnown RBP29.5■■■□□ 2.31
TSKU-201ENST00000333090 RAB3GAP1Q15042 981 aa29.5■■■□□ 2.31
TSKU-201ENST00000333090 FYB1O15117 783 aa29.5■■■□□ 2.31
TSKU-201ENST00000333090 ALDH1L2Q3SY69 923 aa29.5■■■□□ 2.31
TSKU-201ENST00000333090 ESPNB1AK53 854 aa29.49■■■□□ 2.31
TSKU-201ENST00000333090 GAS2L3Q86XJ1 694 aa29.49■■■□□ 2.31
TSKU-201ENST00000333090 KIF2CQ99661 725 aa29.49■■■□□ 2.31
TSKU-201ENST00000333090 CD2BP2O95400 341 aaKnown RBP29.48■■■□□ 2.31
TSKU-201ENST00000333090 C1orf115Q9H7X2 142 aa29.48■■■□□ 2.31
TSKU-201ENST00000333090 TRIM44Q96DX7 344 aaPredicted RBP29.47■■■□□ 2.31
TSKU-201ENST00000333090 ERBB4Q15303 1308 aa29.46■■■□□ 2.31
TSKU-201ENST00000333090 TERF2IPQ9NYB0 399 aa29.44■■■□□ 2.3
TSKU-201ENST00000333090 SKOR2Q2VWA4 1001 aaPredicted RBP29.44■■■□□ 2.3
TSKU-201ENST00000333090 TBC1D9Q6ZT07 1266 aa29.44■■■□□ 2.3
TSKU-201ENST00000333090 RBM42Q9BTD8 480 aaKnown RBP29.44■■■□□ 2.3
TSKU-201ENST00000333090 MINK1Q8N4C8 1332 aaPredicted RBP29.43■■■□□ 2.3
TSKU-201ENST00000333090 PPIP5K1Q6PFW1 1433 aa29.43■■■□□ 2.3
TSKU-201ENST00000333090 ZBTB7BO15156 539 aaPredicted RBP29.43■■■□□ 2.3
TSKU-201ENST00000333090 K7ELQ4 463 aaPredicted RBP29.42■■■□□ 2.3
TSKU-201ENST00000333090 GCC1Q96CN9 775 aa29.42■■■□□ 2.3
TSKU-201ENST00000333090 CAMSAP1Q5T5Y3 1602 aa29.42■■■□□ 2.3
TSKU-201ENST00000333090 CFAP74Q9C0B2 1584 aa29.4■■■□□ 2.3
TSKU-201ENST00000333090 DIP2CQ9Y2E4 1556 aa29.4■■■□□ 2.3
TSKU-201ENST00000333090 PRKAR2BP31323 418 aa29.39■■■□□ 2.3
TSKU-201ENST00000333090 MED14O60244 1454 aa29.38■■■□□ 2.29
TSKU-201ENST00000333090 FCHSD2O94868 740 aa29.37■■■□□ 2.29
TSKU-201ENST00000333090 PTMSP20962 102 aa29.37■■■□□ 2.29
TSKU-201ENST00000333090 SSFA2P28290 1259 aa29.37■■■□□ 2.29
TSKU-201ENST00000333090 THUMPD2Q9BTF0 503 aaKnown RBP29.37■■■□□ 2.29
TSKU-201ENST00000333090 NEXMIFQ5QGS0 1516 aa29.37■■■□□ 2.29
TSKU-201ENST00000333090 ATAD2Q6PL18 1390 aa29.37■■■□□ 2.29
TSKU-201ENST00000333090 ELL2O00472 640 aaPredicted RBP29.36■■■□□ 2.29
TSKU-201ENST00000333090 GAS2L2Q8NHY3 880 aa29.36■■■□□ 2.29
TSKU-201ENST00000333090 ZNF428Q96B54 188 aa29.36■■■□□ 2.29
TSKU-201ENST00000333090 PRAM1Q96QH2 718 aa29.36■■■□□ 2.29
TSKU-201ENST00000333090 CHMP4BQ9H444 224 aaKnown RBP29.36■■■□□ 2.29
TSKU-201ENST00000333090 BRPF1P55201 1214 aaPredicted RBP29.35■■■□□ 2.29
TSKU-201ENST00000333090 PNPLA6Q8IY17 1366 aa29.35■■■□□ 2.29
TSKU-201ENST00000333090 FBLN1P23142 703 aa29.35■■■□□ 2.29
TSKU-201ENST00000333090 TSPYL6Q8N831 410 aa29.35■■■□□ 2.29
TSKU-201ENST00000333090 VAMP4O75379 141 aa29.34■■■□□ 2.29
TSKU-201ENST00000333090 SIRT2Q8IXJ6 389 aa29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms