RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 HSCBQ8IWL3 235 aa22.81■■□□□ 1.24
PKP3-201ENST00000331563 ARHGAP31Q2M1Z3 1444 aa22.81■■□□□ 1.24
PKP3-201ENST00000331563 ISY1Q9ULR0 285 aaKnown RBP22.8■■□□□ 1.24
PKP3-201ENST00000331563 TRHP20396 242 aaPredicted RBP22.8■■□□□ 1.24
PKP3-201ENST00000331563 DMRT2Q9Y5R5 561 aa22.8■■□□□ 1.24
PKP3-201ENST00000331563 CABP2Q9NPB3 220 aa22.79■■□□□ 1.24
PKP3-201ENST00000331563 PCDHB15Q9Y5E8 787 aa22.79■■□□□ 1.24
PKP3-201ENST00000331563 NEXMIFQ5QGS0 1516 aa22.78■■□□□ 1.24
PKP3-201ENST00000331563 PIK3C2BO00750 1634 aa22.78■■□□□ 1.24
PKP3-201ENST00000331563 ADGRB1O14514 1584 aa22.77■■□□□ 1.24
PKP3-201ENST00000331563 ESF1Q9H501 851 aaKnown RBP22.77■■□□□ 1.23
PKP3-201ENST00000331563 PREX1Q8TCU6 1659 aa22.76■■□□□ 1.23
PKP3-201ENST00000331563 MYOM1P52179 1685 aa22.76■■□□□ 1.23
PKP3-201ENST00000331563 RWDD1Q9H446 243 aaPredicted RBP22.76■■□□□ 1.23
PKP3-201ENST00000331563 MAP7D2Q96T17 732 aa22.75■■□□□ 1.23
PKP3-201ENST00000331563 CLTCQ00610 1675 aaKnown RBP22.75■■□□□ 1.23
PKP3-201ENST00000331563 PDIA4P13667 645 aaKnown RBP22.75■■□□□ 1.23
PKP3-201ENST00000331563 NEUROD2Q15784 382 aa22.75■■□□□ 1.23
PKP3-201ENST00000331563 BCL11BQ9C0K0 894 aaPredicted RBP22.75■■□□□ 1.23
PKP3-201ENST00000331563 MINK1Q8N4C8 1332 aaPredicted RBP22.74■■□□□ 1.23
PKP3-201ENST00000331563 GAS2L3Q86XJ1 694 aa22.74■■□□□ 1.23
PKP3-201ENST00000331563 KDM5AP29375 1690 aaKnown RBP22.74■■□□□ 1.23
PKP3-201ENST00000331563 ANP32BQ92688 251 aaKnown RBP22.74■■□□□ 1.23
PKP3-201ENST00000331563 BCL2L13Q9BXK5 485 aa22.74■■□□□ 1.23
PKP3-201ENST00000331563 NINLQ9Y2I6 1382 aa22.74■■□□□ 1.23
PKP3-201ENST00000331563 SMAP1Q8IYB5 467 aaPredicted RBP22.73■■□□□ 1.23
PKP3-201ENST00000331563 ZC3H13Q5T200 1668 aaKnown RBP22.73■■□□□ 1.23
PKP3-201ENST00000331563 PRAM1Q96QH2 718 aa22.72■■□□□ 1.23
PKP3-201ENST00000331563 GBP4Q96PP9 640 aa22.71■■□□□ 1.23
PKP3-201ENST00000331563 TNNQ9UQP3 1299 aa22.71■■□□□ 1.23
PKP3-201ENST00000331563 ASXL1Q8IXJ9 1541 aa22.7■■□□□ 1.23
PKP3-201ENST00000331563 MSNP26038 577 aaKnown RBP22.7■■□□□ 1.22
PKP3-201ENST00000331563 TMEM131LA2VDJ0 1609 aa22.7■■□□□ 1.22
PKP3-201ENST00000331563 RLBP1P12271 317 aa22.69■■□□□ 1.22
PKP3-201ENST00000331563 CEBPAP49715 358 aaPredicted RBP22.69■■□□□ 1.22
PKP3-201ENST00000331563 SRPK2P78362 688 aaKnown RBP22.69■■□□□ 1.22
PKP3-201ENST00000331563 SETBP1Q9Y6X0 1596 aa22.69■■□□□ 1.22
PKP3-201ENST00000331563 TNPO1Q92973 898 aaKnown RBP22.69■■□□□ 1.22
PKP3-201ENST00000331563 RIPK4P57078 832 aa22.68■■□□□ 1.22
PKP3-201ENST00000331563 FAM13BQ9NYF5 915 aa22.68■■□□□ 1.22
PKP3-201ENST00000331563 QRICH2Q9H0J4 1663 aa22.68■■□□□ 1.22
PKP3-201ENST00000331563 HSP90AB1P08238 724 aaKnown RBP22.67■■□□□ 1.22
PKP3-201ENST00000331563 WAPLQ7Z5K2 1190 aa22.67■■□□□ 1.22
PKP3-201ENST00000331563 NSD3Q9BZ95 1437 aa22.67■■□□□ 1.22
PKP3-201ENST00000331563 ZMYM3Q14202 1370 aa22.67■■□□□ 1.22
PKP3-201ENST00000331563 CCDC173Q0VFZ6 552 aa22.66■■□□□ 1.22
PKP3-201ENST00000331563 SKOR2Q2VWA4 1001 aaPredicted RBP22.66■■□□□ 1.22
PKP3-201ENST00000331563 WWC1Q8IX03 1113 aa22.66■■□□□ 1.22
PKP3-201ENST00000331563 BBXQ8WY36 941 aaPredicted RBP22.66■■□□□ 1.22
PKP3-201ENST00000331563 NASPP49321 788 aaPredicted RBP22.66■■□□□ 1.22
PKP3-201ENST00000331563 RARSP54136 660 aaKnown RBP22.66■■□□□ 1.22
PKP3-201ENST00000331563 ZSCAN30Q86W11 494 aa22.66■■□□□ 1.22
PKP3-201ENST00000331563 SBNO2Q9Y2G9 1366 aa22.65■■□□□ 1.22
PKP3-201ENST00000331563 EVC2Q86UK5 1308 aa22.65■■□□□ 1.22
PKP3-201ENST00000331563 ARHGEF40Q8TER5 1519 aa22.65■■□□□ 1.22
PKP3-201ENST00000331563 TERF1P54274 439 aa22.65■■□□□ 1.22
PKP3-201ENST00000331563 FOXD4L1Q9NU39 408 aa22.65■■□□□ 1.22
PKP3-201ENST00000331563 ARID3AQ99856 593 aa22.64■■□□□ 1.22
PKP3-201ENST00000331563 RRP7AQ9Y3A4 280 aaKnown RBP22.64■■□□□ 1.22
PKP3-201ENST00000331563 ZNF692Q9BU19 519 aaPredicted RBP22.64■■□□□ 1.21
PKP3-201ENST00000331563 ZHX1Q9UKY1 873 aaPredicted RBP22.64■■□□□ 1.21
PKP3-201ENST00000331563 AGLP35573 1532 aa22.64■■□□□ 1.21
PKP3-201ENST00000331563 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.63■■□□□ 1.21
PKP3-201ENST00000331563 MORC1Q86VD1 984 aa22.63■■□□□ 1.21
PKP3-201ENST00000331563 OFD1O75665 1012 aa22.63■■□□□ 1.21
PKP3-201ENST00000331563 R3HCC1Q9Y3T6 440 aaKnown RBP22.63■■□□□ 1.21
PKP3-201ENST00000331563 MYO3AQ8NEV4 1616 aa22.61■■□□□ 1.21
PKP3-201ENST00000331563 NGEFQ8N5V2 710 aa22.61■■□□□ 1.21
PKP3-201ENST00000331563 FTSJ3Q8IY81 847 aaKnown RBP22.6■■□□□ 1.21
PKP3-201ENST00000331563 PPP6R1Q9UPN7 881 aa22.6■■□□□ 1.21
PKP3-201ENST00000331563 REREQ9P2R6 1566 aa22.6■■□□□ 1.21
PKP3-201ENST00000331563 TULP4Q9NRJ4 1543 aa22.6■■□□□ 1.21
PKP3-201ENST00000331563 A2ML1A8K2U0 1454 aa22.59■■□□□ 1.21
PKP3-201ENST00000331563 ARHGEF28Q8N1W1 1705 aaKnown RBP22.59■■□□□ 1.21
PKP3-201ENST00000331563 YTHDC2Q9H6S0 1430 aaKnown RBP22.59■■□□□ 1.21
PKP3-201ENST00000331563 GOLGA6L22H0YM25 854 aa22.58■■□□□ 1.2
PKP3-201ENST00000331563 PTMSP20962 102 aa22.58■■□□□ 1.2
PKP3-201ENST00000331563 GTF2E1P29083 439 aaPredicted RBP22.58■■□□□ 1.2
PKP3-201ENST00000331563 RIMS2Q9UQ26 1411 aa22.57■■□□□ 1.2
PKP3-201ENST00000331563 ZFYVE9O95405 1425 aa22.57■■□□□ 1.2
PKP3-201ENST00000331563 UTP14CQ5TAP6 766 aaKnown RBP22.56■■□□□ 1.2
PKP3-201ENST00000331563 MTERF4Q7Z6M4 381 aaKnown RBP22.56■■□□□ 1.2
PKP3-201ENST00000331563 TXNDC2Q86VQ3 553 aa22.56■■□□□ 1.2
PKP3-201ENST00000331563 PPP1R9BQ96SB3 815 aa22.56■■□□□ 1.2
PKP3-201ENST00000331563 NCLP19338 710 aaKnown RBP22.55■■□□□ 1.2
PKP3-201ENST00000331563 GGNBP2Q9H3C7 697 aa22.55■■□□□ 1.2
PKP3-201ENST00000331563 CIZ1Q9ULV3 898 aaPredicted RBP22.55■■□□□ 1.2
PKP3-201ENST00000331563 DDX49Q9Y6V7 483 aaKnown RBP22.55■■□□□ 1.2
PKP3-201ENST00000331563 ALKQ9UM73 1620 aa22.55■■□□□ 1.2
PKP3-201ENST00000331563 RAB3GAP1Q15042 981 aa22.55■■□□□ 1.2
PKP3-201ENST00000331563 CDK19Q9BWU1 502 aa22.55■■□□□ 1.2
PKP3-201ENST00000331563 MVPQ14764 893 aaKnown RBP22.54■■□□□ 1.2
PKP3-201ENST00000331563 SMC5Q8IY18 1101 aa22.54■■□□□ 1.2
PKP3-201ENST00000331563 NPC1L1Q9UHC9 1359 aa22.54■■□□□ 1.2
PKP3-201ENST00000331563 DDIT3P35638 169 aa22.53■■□□□ 1.2
PKP3-201ENST00000331563 MTHFSP49914 203 aa22.53■■□□□ 1.2
PKP3-201ENST00000331563 NAP1L2Q9ULW6 460 aaPredicted RBP22.53■■□□□ 1.2
PKP3-201ENST00000331563 PTPRMP28827 1452 aa22.53■■□□□ 1.2
PKP3-201ENST00000331563 CABP1Q9NZU7 370 aa22.53■■□□□ 1.2
PKP3-201ENST00000331563 PRDM10Q9NQV6 1147 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms