RNA–Protein interactions for RNA: ENST00000327578.9

PCM1-202, Transcript of pericentriolar material 1, humanhuman

TSL 5 BASIC

Gene PCM1, Length 8,287 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-202ENST00000327578 TICAM2Q86XR7 235 aa16.37■□□□□ 0.21
PCM1-202ENST00000327578 ATP2B1P20020 1258 aa16.37■□□□□ 0.21
PCM1-202ENST00000327578 EZRP15311 586 aaKnown RBP16.37■□□□□ 0.21
PCM1-202ENST00000327578 SOGA1O94964 1423 aa16.37■□□□□ 0.21
PCM1-202ENST00000327578 PRDM2Q13029 1718 aa16.37■□□□□ 0.21
PCM1-202ENST00000327578 LUC7LQ9NQ29 371 aaKnown RBP16.37■□□□□ 0.21
PCM1-202ENST00000327578 AEBP1Q8IUX7 1158 aa16.36■□□□□ 0.21
PCM1-202ENST00000327578 IKQ13123 557 aaPredicted RBP16.36■□□□□ 0.21
PCM1-202ENST00000327578 RBM33Q96EV2 1170 aaKnown RBP16.36■□□□□ 0.21
PCM1-202ENST00000327578 NF2P35240 595 aa16.36■□□□□ 0.21
PCM1-202ENST00000327578 GPATCH11Q8N954 259 aa16.35■□□□□ 0.21
PCM1-202ENST00000327578 HSP90AB4PQ58FF6 505 aa16.35■□□□□ 0.21
PCM1-202ENST00000327578 NEK4P51957 841 aa16.35■□□□□ 0.21
PCM1-202ENST00000327578 WWC2Q6AWC2 1192 aa16.35■□□□□ 0.21
PCM1-202ENST00000327578 IQCEQ6IPM2 695 aa16.35■□□□□ 0.21
PCM1-202ENST00000327578 MEX3CQ5U5Q3 659 aaKnown RBP16.35■□□□□ 0.21
PCM1-202ENST00000327578 PDCP20941 246 aa16.34■□□□□ 0.21
PCM1-202ENST00000327578 IBSPP21815 317 aaPredicted RBP16.34■□□□□ 0.21
PCM1-202ENST00000327578 CBX1P83916 185 aa16.34■□□□□ 0.21
PCM1-202ENST00000327578 USP47Q96K76 1375 aa16.34■□□□□ 0.21
PCM1-202ENST00000327578 KRT18P05783 430 aaKnown RBP16.34■□□□□ 0.21
PCM1-202ENST00000327578 PDCL2Q8N4E4 241 aa16.34■□□□□ 0.21
PCM1-202ENST00000327578 EVC2Q86UK5 1308 aa16.34■□□□□ 0.21
PCM1-202ENST00000327578 MCM2P49736 904 aa16.34■□□□□ 0.21
PCM1-202ENST00000327578 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.34■□□□□ 0.21
PCM1-202ENST00000327578 KIF3BO15066 747 aa16.33■□□□□ 0.21
PCM1-202ENST00000327578 HNRNPMP52272 730 aaKnown RBP eCLIP16.33■□□□□ 0.217e-7■■■■□ 20.8
PCM1-202ENST00000327578 DHX8Q14562 1220 aaKnown RBP16.33■□□□□ 0.21
PCM1-202ENST00000327578 MAP2K1Q02750 393 aaPredicted RBP16.33■□□□□ 0.2
PCM1-202ENST00000327578 SART3Q15020 963 aaKnown RBP16.33■□□□□ 0.2
PCM1-202ENST00000327578 RUNDC1Q96C34 613 aa16.33■□□□□ 0.2
PCM1-202ENST00000327578 TSPYL4Q9UJ04 414 aa16.33■□□□□ 0.2
PCM1-202ENST00000327578 RIC3Q7Z5B4 369 aa16.33■□□□□ 0.2
PCM1-202ENST00000327578 SYTL4Q96C24 671 aaPredicted RBP16.32■□□□□ 0.2
PCM1-202ENST00000327578 TANGO6Q9C0B7 1094 aa16.32■□□□□ 0.2
PCM1-202ENST00000327578 DIAPH1O60610 1272 aaKnown RBP16.32■□□□□ 0.2
PCM1-202ENST00000327578 STK38Q15208 465 aa16.32■□□□□ 0.2
PCM1-202ENST00000327578 DACH1Q9UI36 760 aa16.32■□□□□ 0.2
PCM1-202ENST00000327578 TXLNBQ8N3L3 684 aa16.32■□□□□ 0.2
PCM1-202ENST00000327578 SLC26A8Q96RN1 970 aa16.32■□□□□ 0.2
PCM1-202ENST00000327578 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
PCM1-202ENST00000327578 STIM1Q13586 685 aa16.32■□□□□ 0.2
PCM1-202ENST00000327578 RBM25P49756 843 aaKnown RBP16.32■□□□□ 0.2
PCM1-202ENST00000327578 CCDC144AA2RUR9 1427 aa16.31■□□□□ 0.2
PCM1-202ENST00000327578 FSD1Q9BTV5 496 aa16.31■□□□□ 0.2
PCM1-202ENST00000327578 CFAP45Q9UL16 551 aa16.31■□□□□ 0.2
PCM1-202ENST00000327578 KIAA1328Q86T90 577 aa16.3■□□□□ 0.2
PCM1-202ENST00000327578 CBFA2T2O43439 604 aa16.3■□□□□ 0.2
PCM1-202ENST00000327578 AIMP1Q12904 312 aaKnown RBP16.3■□□□□ 0.2
PCM1-202ENST00000327578 ME1P48163 572 aa16.3■□□□□ 0.2
PCM1-202ENST00000327578 STK3Q13188 491 aa16.3■□□□□ 0.2
PCM1-202ENST00000327578 TMCO3Q6UWJ1 677 aa16.3■□□□□ 0.2
PCM1-202ENST00000327578 UBTFL1P0CB47 393 aaPredicted RBP16.3■□□□□ 0.2
PCM1-202ENST00000327578 UACAQ9BZF9 1416 aa16.3■□□□□ 0.2
PCM1-202ENST00000327578 SHTN1A0MZ66 631 aa16.29■□□□□ 0.2
PCM1-202ENST00000327578 SEPT11Q9NVA2 429 aaKnown RBP16.29■□□□□ 0.2
PCM1-202ENST00000327578 PDCL3Q9H2J4 239 aa16.29■□□□□ 0.2
PCM1-202ENST00000327578 WASHC2CQ9Y4E1 1318 aa16.29■□□□□ 0.2
PCM1-202ENST00000327578 ZHX3Q9H4I2 956 aa16.29■□□□□ 0.2
PCM1-202ENST00000327578 CCDC91Q7Z6B0 441 aa16.28■□□□□ 0.2
PCM1-202ENST00000327578 DDX11Q96FC9 970 aa16.28■□□□□ 0.2
PCM1-202ENST00000327578 DNAJC2Q99543 621 aaKnown RBP16.28■□□□□ 0.2
PCM1-202ENST00000327578 HMOX1P09601 288 aa16.27■□□□□ 0.2
PCM1-202ENST00000327578 CCDC148Q8NFR7 591 aa16.27■□□□□ 0.19
PCM1-202ENST00000327578 CASQ1P31415 396 aa16.26■□□□□ 0.19
PCM1-202ENST00000327578 CRACR2AQ9BSW2 395 aa16.26■□□□□ 0.19
PCM1-202ENST00000327578 ESPNB1AK53 854 aa16.26■□□□□ 0.19
PCM1-202ENST00000327578 JMYQ8N9B5 988 aa16.26■□□□□ 0.19
PCM1-202ENST00000327578 RSPH4AQ5TD94 716 aa16.26■□□□□ 0.19
PCM1-202ENST00000327578 CCDC113Q9H0I3 377 aa16.26■□□□□ 0.19
PCM1-202ENST00000327578 HIP1O00291 1037 aa16.26■□□□□ 0.19
PCM1-202ENST00000327578 CEP63Q96MT8 703 aa16.26■□□□□ 0.19
PCM1-202ENST00000327578 AAMPQ13685 434 aa16.25■□□□□ 0.19
PCM1-202ENST00000327578 IPO4Q8TEX9 1081 aaKnown RBP16.25■□□□□ 0.19
PCM1-202ENST00000327578 UBXN4Q92575 508 aa16.25■□□□□ 0.19
PCM1-202ENST00000327578 CARMIL2Q6F5E8 1435 aa16.25■□□□□ 0.19
PCM1-202ENST00000327578 K7ELQ4 463 aaPredicted RBP16.24■□□□□ 0.19
PCM1-202ENST00000327578 BCCIPQ9P287 314 aaKnown RBP eCLIP16.24■□□□□ 0.19
PCM1-202ENST00000327578 CCDC18Q5T9S5 1454 aa16.24■□□□□ 0.19
PCM1-202ENST00000327578 TRERF1Q96PN7 1200 aa16.24■□□□□ 0.19
PCM1-202ENST00000327578 EPB41L2O43491 1005 aaKnown RBP16.24■□□□□ 0.19
PCM1-202ENST00000327578 WDR33Q9C0J8 1336 aaKnown RBP16.24■□□□□ 0.19
PCM1-202ENST00000327578 SLC3A2P08195 630 aaKnown RBP16.24■□□□□ 0.19
PCM1-202ENST00000327578 KRT85P78386 507 aa16.24■□□□□ 0.19
PCM1-202ENST00000327578 POLR3GO15318 223 aaPredicted RBP16.24■□□□□ 0.19
PCM1-202ENST00000327578 GNAI1P63096 354 aa16.24■□□□□ 0.19
PCM1-202ENST00000327578 CALCOCO1Q9P1Z2 691 aa16.24■□□□□ 0.19
PCM1-202ENST00000327578 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
PCM1-202ENST00000327578 MINK1Q8N4C8 1332 aaPredicted RBP16.23■□□□□ 0.19
PCM1-202ENST00000327578 RNF187Q5TA31 235 aaPredicted RBP16.23■□□□□ 0.19
PCM1-202ENST00000327578 JAKMIP3Q5VZ66 844 aa16.23■□□□□ 0.19
PCM1-202ENST00000327578 CGNQ9P2M7 1197 aaKnown RBP16.23■□□□□ 0.19
PCM1-202ENST00000327578 FILIP1Q7Z7B0 1213 aa16.22■□□□□ 0.19
PCM1-202ENST00000327578 C1orf115Q9H7X2 142 aa16.22■□□□□ 0.19
PCM1-202ENST00000327578 MAP9Q49MG5 647 aa16.22■□□□□ 0.19
PCM1-202ENST00000327578 ANKRD1Q15327 319 aa16.22■□□□□ 0.19
PCM1-202ENST00000327578 CCDC97Q96F63 343 aaPredicted RBP16.22■□□□□ 0.19
PCM1-202ENST00000327578 EFCAB2Q5VUJ9 269 aa16.22■□□□□ 0.19
PCM1-202ENST00000327578 PDZRN3Q9UPQ7 1066 aa16.22■□□□□ 0.19
PCM1-202ENST00000327578 CYP46A1Q9Y6A2 500 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms