RNA–Protein interactions for RNA: ENST00000326956.11

SSBP3-201, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 2

Gene SSBP3, Length 2,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-201ENST00000326956 GGNBP2Q9H3C7 697 aa18.32■□□□□ 0.52
SSBP3-201ENST00000326956 GBP4Q96PP9 640 aa18.31■□□□□ 0.52
SSBP3-201ENST00000326956 MROH1Q8NDA8 1641 aa18.31■□□□□ 0.52
SSBP3-201ENST00000326956 ADGRB3O60242 1522 aa18.31■□□□□ 0.52
SSBP3-201ENST00000326956 CFAP65Q6ZU64 1925 aaKnown RBP18.3■□□□□ 0.52
SSBP3-201ENST00000326956 VGFO15240 615 aaPredicted RBP18.3■□□□□ 0.52
SSBP3-201ENST00000326956 GRPEL1Q9HAV7 217 aa18.3■□□□□ 0.52
SSBP3-201ENST00000326956 ABCC11Q96J66 1382 aa18.3■□□□□ 0.52
SSBP3-201ENST00000326956 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
SSBP3-201ENST00000326956 IL16Q14005 1332 aa18.3■□□□□ 0.52
SSBP3-201ENST00000326956 ZBTB40Q9NUA8 1239 aa18.29■□□□□ 0.52
SSBP3-201ENST00000326956 TRIM35Q9UPQ4 493 aa18.29■□□□□ 0.52
SSBP3-201ENST00000326956 PPRC1Q5VV67 1664 aaKnown RBP18.29■□□□□ 0.52
SSBP3-201ENST00000326956 ISY1Q9ULR0 285 aaKnown RBP18.29■□□□□ 0.52
SSBP3-201ENST00000326956 TRIM44Q96DX7 344 aaPredicted RBP18.29■□□□□ 0.52
SSBP3-201ENST00000326956 CLCN1P35523 988 aa18.28■□□□□ 0.52
SSBP3-201ENST00000326956 NUCB1Q02818 461 aa18.28■□□□□ 0.52
SSBP3-201ENST00000326956 RBM25P49756 843 aaKnown RBP18.28■□□□□ 0.52
SSBP3-201ENST00000326956 CHD1LQ86WJ1 897 aa18.28■□□□□ 0.52
SSBP3-201ENST00000326956 SNX21Q969T3 373 aa18.27■□□□□ 0.52
SSBP3-201ENST00000326956 PLEKHF1Q96S99 279 aa18.27■□□□□ 0.52
SSBP3-201ENST00000326956 CHMP4BQ9H444 224 aaKnown RBP18.27■□□□□ 0.52
SSBP3-201ENST00000326956 STK26Q9P289 416 aa18.27■□□□□ 0.52
SSBP3-201ENST00000326956 CIZ1Q9ULV3 898 aaPredicted RBP18.27■□□□□ 0.52
SSBP3-201ENST00000326956 TERF2IPQ9NYB0 399 aa18.26■□□□□ 0.51
SSBP3-201ENST00000326956 ABCA9Q8IUA7 1624 aa18.26■□□□□ 0.51
SSBP3-201ENST00000326956 DIAPH1O60610 1272 aaKnown RBP18.26■□□□□ 0.51
SSBP3-201ENST00000326956 PTMSP20962 102 aa18.26■□□□□ 0.51
SSBP3-201ENST00000326956 SENP3Q9H4L4 574 aaPredicted RBP18.26■□□□□ 0.51
SSBP3-201ENST00000326956 ADGRB1O14514 1584 aa18.26■□□□□ 0.51
SSBP3-201ENST00000326956 ADGRB2O60241 1585 aa18.26■□□□□ 0.51
SSBP3-201ENST00000326956 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
SSBP3-201ENST00000326956 SKOR2Q2VWA4 1001 aaPredicted RBP18.25■□□□□ 0.51
SSBP3-201ENST00000326956 TNPO1Q92973 898 aaKnown RBP18.25■□□□□ 0.51
SSBP3-201ENST00000326956 ZC3H13Q5T200 1668 aaKnown RBP18.25■□□□□ 0.51
SSBP3-201ENST00000326956 NPATQ14207 1427 aa18.25■□□□□ 0.51
SSBP3-201ENST00000326956 CD109Q6YHK3 1445 aa18.25■□□□□ 0.51
SSBP3-201ENST00000326956 LMTK2Q8IWU2 1503 aa18.25■□□□□ 0.51
SSBP3-201ENST00000326956 ALDH1L2Q3SY69 923 aa18.24■□□□□ 0.51
SSBP3-201ENST00000326956 ZNF692Q9BU19 519 aaPredicted RBP18.24■□□□□ 0.51
SSBP3-201ENST00000326956 A0A1W2PP64 1363 aa18.23■□□□□ 0.51
SSBP3-201ENST00000326956 GOLGA6L22H0YM25 854 aa18.23■□□□□ 0.51
SSBP3-201ENST00000326956 BMP2KLQ5H9B9 411 aa18.23■□□□□ 0.51
SSBP3-201ENST00000326956 FOXD4L1Q9NU39 408 aa18.23■□□□□ 0.51
SSBP3-201ENST00000326956 PPLO60437 1756 aa18.22■□□□□ 0.51
SSBP3-201ENST00000326956 GCC1Q96CN9 775 aa18.22■□□□□ 0.51
SSBP3-201ENST00000326956 GLIPR1L2Q4G1C9 344 aa18.21■□□□□ 0.51
SSBP3-201ENST00000326956 ESPNB1AK53 854 aa18.21■□□□□ 0.51
SSBP3-201ENST00000326956 HDGFL2Q7Z4V5 671 aaPredicted RBP18.21■□□□□ 0.51
SSBP3-201ENST00000326956 TULP4Q9NRJ4 1543 aa18.21■□□□□ 0.51
SSBP3-201ENST00000326956 GLI2P10070 1586 aa18.2■□□□□ 0.5
SSBP3-201ENST00000326956 FYB1O15117 783 aa18.2■□□□□ 0.5
SSBP3-201ENST00000326956 RAB3GAP1Q15042 981 aa18.19■□□□□ 0.5
SSBP3-201ENST00000326956 ZNF428Q96B54 188 aa18.19■□□□□ 0.5
SSBP3-201ENST00000326956 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-201ENST00000326956 NCOA3Q9Y6Q9 1424 aa18.19■□□□□ 0.5
SSBP3-201ENST00000326956 ANP32BQ92688 251 aaKnown RBP18.19■□□□□ 0.5
SSBP3-201ENST00000326956 K7ELQ4 463 aaPredicted RBP18.19■□□□□ 0.5
SSBP3-201ENST00000326956 KIDINS220Q9ULH0 1771 aa18.19■□□□□ 0.5
SSBP3-201ENST00000326956 DDIT3P35638 169 aa18.18■□□□□ 0.5
SSBP3-201ENST00000326956 ATAD2Q6PL18 1390 aa18.18■□□□□ 0.5
SSBP3-201ENST00000326956 FCHSD2O94868 740 aa18.18■□□□□ 0.5
SSBP3-201ENST00000326956 C1orf115Q9H7X2 142 aa18.18■□□□□ 0.5
SSBP3-201ENST00000326956 CALD1Q05682 793 aaKnown RBP18.17■□□□□ 0.5
SSBP3-201ENST00000326956 PRKAR2BP31323 418 aa18.16■□□□□ 0.5
SSBP3-201ENST00000326956 TBC1D9Q6ZT07 1266 aa18.16■□□□□ 0.5
SSBP3-201ENST00000326956 NPM1P06748 294 aaKnown RBP eCLIP18.16■□□□□ 0.5
SSBP3-201ENST00000326956 ASXL2Q76L83 1435 aa18.15■□□□□ 0.5
SSBP3-201ENST00000326956 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.49
SSBP3-201ENST00000326956 ELL2O00472 640 aaPredicted RBP18.14■□□□□ 0.49
SSBP3-201ENST00000326956 CDC45O75419 566 aa18.13■□□□□ 0.49
SSBP3-201ENST00000326956 HSP90AA2PQ14568 343 aaPredicted RBP18.13■□□□□ 0.49
SSBP3-201ENST00000326956 GAS2L3Q86XJ1 694 aa18.13■□□□□ 0.49
SSBP3-201ENST00000326956 PRAM1Q96QH2 718 aa18.13■□□□□ 0.49
SSBP3-201ENST00000326956 ARHGEF28Q8N1W1 1705 aaKnown RBP18.13■□□□□ 0.49
SSBP3-201ENST00000326956 COL3A1P02461 1466 aaPredicted RBP18.13■□□□□ 0.49
SSBP3-201ENST00000326956 ARHGAP45Q92619 1136 aa18.12■□□□□ 0.49
SSBP3-201ENST00000326956 DDX49Q9Y6V7 483 aaKnown RBP18.12■□□□□ 0.49
SSBP3-201ENST00000326956 CFAP44Q96MT7 982 aa18.12■□□□□ 0.49
SSBP3-201ENST00000326956 RBM42Q9BTD8 480 aaKnown RBP18.12■□□□□ 0.49
SSBP3-201ENST00000326956 PPIP5K1Q6PFW1 1433 aa18.12■□□□□ 0.49
SSBP3-201ENST00000326956 GNAI1P63096 354 aa18.12■□□□□ 0.49
SSBP3-201ENST00000326956 KIF2CQ99661 725 aa18.12■□□□□ 0.49
SSBP3-201ENST00000326956 CD2BP2O95400 341 aaKnown RBP18.11■□□□□ 0.49
SSBP3-201ENST00000326956 SSFA2P28290 1259 aa18.11■□□□□ 0.49
SSBP3-201ENST00000326956 BRPF1P55201 1214 aaPredicted RBP18.11■□□□□ 0.49
SSBP3-201ENST00000326956 HMOX1P09601 288 aa18.11■□□□□ 0.49
SSBP3-201ENST00000326956 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.11■□□□□ 0.49
SSBP3-201ENST00000326956 MRPL50Q8N5N7 158 aaKnown RBP18.11■□□□□ 0.49
SSBP3-201ENST00000326956 VAMP4O75379 141 aa18.1■□□□□ 0.49
SSBP3-201ENST00000326956 IDI1Q13907 227 aa18.1■□□□□ 0.49
SSBP3-201ENST00000326956 NFE2L2Q16236 605 aa18.1■□□□□ 0.49
SSBP3-201ENST00000326956 THUMPD2Q9BTF0 503 aaKnown RBP18.1■□□□□ 0.49
SSBP3-201ENST00000326956 NASPP49321 788 aaPredicted RBP18.09■□□□□ 0.49
SSBP3-201ENST00000326956 GAS2L2Q8NHY3 880 aa18.09■□□□□ 0.49
SSBP3-201ENST00000326956 NCLP19338 710 aaKnown RBP18.09■□□□□ 0.49
SSBP3-201ENST00000326956 CABP1Q9NZU7 370 aa18.09■□□□□ 0.49
SSBP3-201ENST00000326956 CFAP74Q9C0B2 1584 aa18.09■□□□□ 0.49
SSBP3-201ENST00000326956 CCDC173Q0VFZ6 552 aa18.09■□□□□ 0.49
SSBP3-201ENST00000326956 API5Q9BZZ5 524 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms