RNA–Protein interactions for RNA: ENST00000325180.12

GGA1-201, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 1 (best) BASIC

Gene GGA1, Length 2,528 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-201ENST00000325180 PLEKHG5O94827 1062 aa18.89■□□□□ 0.61
GGA1-201ENST00000325180 USP6P35125 1406 aa18.89■□□□□ 0.61
GGA1-201ENST00000325180 PAK3O75914 559 aaPredicted RBP18.89■□□□□ 0.61
GGA1-201ENST00000325180 TTC21BQ7Z4L5 1316 aa18.88■□□□□ 0.61
GGA1-201ENST00000325180 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
GGA1-201ENST00000325180 PSME1Q06323 249 aa18.88■□□□□ 0.61
GGA1-201ENST00000325180 DCCP43146 1447 aa18.87■□□□□ 0.61
GGA1-201ENST00000325180 MON2Q7Z3U7 1717 aa18.87■□□□□ 0.61
GGA1-201ENST00000325180 RALBP1Q15311 655 aa18.87■□□□□ 0.61
GGA1-201ENST00000325180 EDC4Q6P2E9 1401 aaKnown RBP18.87■□□□□ 0.61
GGA1-201ENST00000325180 BRINP3Q76B58 766 aa18.85■□□□□ 0.61
GGA1-201ENST00000325180 PPP2R1AP30153 589 aa18.85■□□□□ 0.61
GGA1-201ENST00000325180 SOX12O15370 315 aa18.84■□□□□ 0.61
GGA1-201ENST00000325180 NPC1L1Q9UHC9 1359 aa18.84■□□□□ 0.61
GGA1-201ENST00000325180 SSH2Q76I76 1423 aa18.84■□□□□ 0.61
GGA1-201ENST00000325180 MRS2Q9HD23 443 aa18.84■□□□□ 0.61
GGA1-201ENST00000325180 MYBBP1AQ9BQG0 1328 aaKnown RBP18.84■□□□□ 0.61
GGA1-201ENST00000325180 KRT28Q7Z3Y7 464 aa18.82■□□□□ 0.6
GGA1-201ENST00000325180 NRKQ7Z2Y5 1582 aa18.82■□□□□ 0.6
GGA1-201ENST00000325180 LMOD2Q6P5Q4 547 aa18.82■□□□□ 0.6
GGA1-201ENST00000325180 CCER2I3L3R5 266 aa18.81■□□□□ 0.6
GGA1-201ENST00000325180 ABTB2Q8N961 1025 aa18.81■□□□□ 0.6
GGA1-201ENST00000325180 KIF20BQ96Q89 1820 aa18.8■□□□□ 0.6
GGA1-201ENST00000325180 NLRP6P59044 892 aa18.79■□□□□ 0.6
GGA1-201ENST00000325180 COG3Q96JB2 828 aa18.79■□□□□ 0.6
GGA1-201ENST00000325180 PIP4K2BP78356 416 aa18.78■□□□□ 0.6
GGA1-201ENST00000325180 NLRP13Q86W25 1043 aa18.78■□□□□ 0.6
GGA1-201ENST00000325180 FAM9BQ8IZU0 186 aa18.78■□□□□ 0.6
GGA1-201ENST00000325180 NSD2O96028 1365 aa18.77■□□□□ 0.6
GGA1-201ENST00000325180 SENP3-EIF4A1A0A087X0R7 540 aa18.77■□□□□ 0.6
GGA1-201ENST00000325180 MTHFSP49914 203 aa18.77■□□□□ 0.6
GGA1-201ENST00000325180 PIK3C2AO00443 1686 aa18.76■□□□□ 0.59
GGA1-201ENST00000325180 RRS1Q15050 365 aaKnown RBP18.76■□□□□ 0.59
GGA1-201ENST00000325180 PPM1GO15355 546 aaPredicted RBP18.76■□□□□ 0.59
GGA1-201ENST00000325180 TTC21AQ8NDW8 1320 aa18.76■□□□□ 0.59
GGA1-201ENST00000325180 KIF1AQ12756 1690 aa18.75■□□□□ 0.59
GGA1-201ENST00000325180 EMILIN1Q9Y6C2 1016 aa18.74■□□□□ 0.59
GGA1-201ENST00000325180 NPHP3Q7Z494 1330 aa18.74■□□□□ 0.59
GGA1-201ENST00000325180 ANKRD26Q9UPS8 1709 aa18.74■□□□□ 0.59
GGA1-201ENST00000325180 UBAP1LF5GYI3 381 aa18.73■□□□□ 0.59
GGA1-201ENST00000325180 OVOS2A0A0J9YW53 1432 aa18.73■□□□□ 0.59
GGA1-201ENST00000325180 OVOS2Q6IE36 1432 aa18.73■□□□□ 0.59
GGA1-201ENST00000325180 CABLES1Q8TDN4 633 aa18.72■□□□□ 0.59
GGA1-201ENST00000325180 POLKQ9UBT6 870 aa18.72■□□□□ 0.59
GGA1-201ENST00000325180 BRD4O60885 1362 aaPredicted RBP18.72■□□□□ 0.59
GGA1-201ENST00000325180 CERKQ8TCT0 537 aa18.72■□□□□ 0.59
GGA1-201ENST00000325180 PNISRQ8TF01 805 aaKnown RBP18.71■□□□□ 0.59
GGA1-201ENST00000325180 TRPM3Q9HCF6 1732 aaPredicted RBP18.71■□□□□ 0.59
GGA1-201ENST00000325180 PXDNQ92626 1479 aa18.71■□□□□ 0.59
GGA1-201ENST00000325180 MAP2P11137 1827 aaKnown RBP18.7■□□□□ 0.58
GGA1-201ENST00000325180 ROBO1Q9Y6N7 1651 aa18.7■□□□□ 0.58
GGA1-201ENST00000325180 MARF1Q9Y4F3 1742 aaKnown RBP18.69■□□□□ 0.58
GGA1-201ENST00000325180 CENPBP07199 599 aaPredicted RBP18.69■□□□□ 0.58
GGA1-201ENST00000325180 TOM1O60784 492 aa18.69■□□□□ 0.58
GGA1-201ENST00000325180 USP31Q70CQ4 1352 aa18.69■□□□□ 0.58
GGA1-201ENST00000325180 ZBTB7CA1YPR0 619 aa18.68■□□□□ 0.58
GGA1-201ENST00000325180 SOS2Q07890 1332 aaPredicted RBP18.68■□□□□ 0.58
GGA1-201ENST00000325180 SPATA31A3Q5VYP0 1347 aa18.67■□□□□ 0.58
GGA1-201ENST00000325180 MAP3K19Q56UN5 1328 aa18.65■□□□□ 0.58
GGA1-201ENST00000325180 GTF3C3Q9Y5Q9 886 aa18.65■□□□□ 0.58
GGA1-201ENST00000325180 GCP02774 474 aa18.64■□□□□ 0.57
GGA1-201ENST00000325180 ADAMTS8Q9UP79 889 aa18.64■□□□□ 0.57
GGA1-201ENST00000325180 ALS2Q96Q42 1657 aa18.64■□□□□ 0.57
GGA1-201ENST00000325180 TNS3Q68CZ2 1445 aa18.64■□□□□ 0.57
GGA1-201ENST00000325180 SBNO1A3KN83 1393 aa18.64■□□□□ 0.57
GGA1-201ENST00000325180 HSP90AB2PQ58FF8 381 aa18.64■□□□□ 0.57
GGA1-201ENST00000325180 ZC3H6P61129 1189 aaKnown RBP18.63■□□□□ 0.57
GGA1-201ENST00000325180 AATKQ6ZMQ8 1374 aa18.63■□□□□ 0.57
GGA1-201ENST00000325180 NHSL1Q5SYE7 1610 aa18.63■□□□□ 0.57
GGA1-201ENST00000325180 MED1Q15648 1581 aaPredicted RBP18.62■□□□□ 0.57
GGA1-201ENST00000325180 PEAK1Q9H792 1746 aa18.61■□□□□ 0.57
GGA1-201ENST00000325180 AMPHP49418 695 aa18.6■□□□□ 0.57
GGA1-201ENST00000325180 CFAP53Q96M91 514 aa18.6■□□□□ 0.57
GGA1-201ENST00000325180 USP19O94966 1318 aa18.6■□□□□ 0.57
GGA1-201ENST00000325180 U2SURPO15042 1029 aaKnown RBP18.59■□□□□ 0.57
GGA1-201ENST00000325180 WDR43Q15061 677 aaKnown RBP eCLIP18.59■□□□□ 0.57
GGA1-201ENST00000325180 CCDC146Q8IYE0 955 aa18.59■□□□□ 0.57
GGA1-201ENST00000325180 LTV1Q96GA3 475 aaPredicted RBP18.58■□□□□ 0.57
GGA1-201ENST00000325180 COL3A1P02461 1466 aaPredicted RBP18.58■□□□□ 0.57
GGA1-201ENST00000325180 NFAT5O94916 1531 aa18.58■□□□□ 0.56
GGA1-201ENST00000325180 PNPLA6Q8IY17 1366 aa18.58■□□□□ 0.56
GGA1-201ENST00000325180 MYT1Q01538 1121 aa18.58■□□□□ 0.56
GGA1-201ENST00000325180 USP54Q70EL1 1684 aa18.57■□□□□ 0.56
GGA1-201ENST00000325180 DIAPH1O60610 1272 aaKnown RBP18.57■□□□□ 0.56
GGA1-201ENST00000325180 SALL2Q9Y467 1007 aaPredicted RBP18.57■□□□□ 0.56
GGA1-201ENST00000325180 SHPRHQ149N8 1683 aa18.57■□□□□ 0.56
GGA1-201ENST00000325180 HNRNPUQ00839 825 aaKnown RBP eCLIP18.57■□□□□ 0.56
GGA1-201ENST00000325180 CHRNA2Q15822 529 aa18.57■□□□□ 0.56
GGA1-201ENST00000325180 KCNH5Q8NCM2 988 aa18.57■□□□□ 0.56
GGA1-201ENST00000325180 U2AF1L5P0DN76 240 aaPredicted RBP18.56■□□□□ 0.56
GGA1-201ENST00000325180 U2AF1Q01081 240 aaKnown RBP eCLIP18.56■□□□□ 0.56
GGA1-201ENST00000325180 LRRC59Q96AG4 307 aaKnown RBP18.56■□□□□ 0.56
GGA1-201ENST00000325180 ARHGEF10O15013 1369 aa18.56■□□□□ 0.56
GGA1-201ENST00000325180 HOXC9P31274 260 aa18.56■□□□□ 0.56
GGA1-201ENST00000325180 ARHGEF25Q86VW2 580 aa18.56■□□□□ 0.56
GGA1-201ENST00000325180 AXIN2Q9Y2T1 843 aa18.56■□□□□ 0.56
GGA1-201ENST00000325180 SMG6Q86US8 1419 aaKnown RBP18.56■□□□□ 0.56
GGA1-201ENST00000325180 SLIT3O75094 1523 aa18.55■□□□□ 0.56
GGA1-201ENST00000325180 IL13P35225 146 aa18.55■□□□□ 0.56
GGA1-201ENST00000325180 EIF4A2Q14240 407 aaKnown RBP18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms