RNA–Protein interactions for RNA: ENST00000323830.3

CPN2-201, Transcript of carboxypeptidase N subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPN2, Length 3,028 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPN2-201ENST00000323830 KIAA1211Q6ZU35 1233 aa16.4■□□□□ 0.22
CPN2-201ENST00000323830 TPM2P07951 284 aa16.39■□□□□ 0.21
CPN2-201ENST00000323830 DDIT3P35638 169 aa16.39■□□□□ 0.21
CPN2-201ENST00000323830 PDCL3Q9H2J4 239 aa16.39■□□□□ 0.21
CPN2-201ENST00000323830 MYOM1P52179 1685 aa16.39■□□□□ 0.21
CPN2-201ENST00000323830 RRP7AQ9Y3A4 280 aaKnown RBP16.38■□□□□ 0.21
CPN2-201ENST00000323830 TNPO1Q92973 898 aaKnown RBP16.38■□□□□ 0.21
CPN2-201ENST00000323830 TNRQ92752 1358 aa16.38■□□□□ 0.21
CPN2-201ENST00000323830 NEXMIFQ5QGS0 1516 aa16.37■□□□□ 0.21
CPN2-201ENST00000323830 MYOM2P54296 1465 aa16.37■□□□□ 0.21
CPN2-201ENST00000323830 HSCBQ8IWL3 235 aa16.36■□□□□ 0.21
CPN2-201ENST00000323830 NCOA3Q9Y6Q9 1424 aa16.36■□□□□ 0.21
CPN2-201ENST00000323830 RWDD1Q9H446 243 aaPredicted RBP16.36■□□□□ 0.21
CPN2-201ENST00000323830 ISY1Q9ULR0 285 aaKnown RBP16.36■□□□□ 0.21
CPN2-201ENST00000323830 IQGAP1P46940 1657 aa16.35■□□□□ 0.21
CPN2-201ENST00000323830 RBM10P98175 930 aaKnown RBP16.35■□□□□ 0.21
CPN2-201ENST00000323830 ADAMTSL3P82987 1691 aa16.34■□□□□ 0.21
CPN2-201ENST00000323830 CFAP70Q5T0N1 1121 aa16.34■□□□□ 0.21
CPN2-201ENST00000323830 RIPK4P57078 832 aa16.33■□□□□ 0.21
CPN2-201ENST00000323830 NPC1L1Q9UHC9 1359 aa16.33■□□□□ 0.2
CPN2-201ENST00000323830 A2ML1A8K2U0 1454 aa16.32■□□□□ 0.2
CPN2-201ENST00000323830 RPGRIP1LQ68CZ1 1315 aa16.32■□□□□ 0.2
CPN2-201ENST00000323830 PRDM4Q9UKN5 801 aa16.32■□□□□ 0.2
CPN2-201ENST00000323830 CARD14Q9BXL6 1004 aa16.31■□□□□ 0.2
CPN2-201ENST00000323830 FOXD4L1Q9NU39 408 aa16.31■□□□□ 0.2
CPN2-201ENST00000323830 UBR1Q8IWV7 1749 aa16.31■□□□□ 0.2
CPN2-201ENST00000323830 STAC3Q96MF2 364 aa16.3■□□□□ 0.2
CPN2-201ENST00000323830 KIAA1210Q9ULL0 1709 aa16.3■□□□□ 0.2
CPN2-201ENST00000323830 NRXN1Q9ULB1 1477 aa16.3■□□□□ 0.2
CPN2-201ENST00000323830 AAMPQ13685 434 aa16.3■□□□□ 0.2
CPN2-201ENST00000323830 MVPQ14764 893 aaKnown RBP16.29■□□□□ 0.2
CPN2-201ENST00000323830 RAB3GAP1Q15042 981 aa16.29■□□□□ 0.2
CPN2-201ENST00000323830 VGFO15240 615 aaPredicted RBP16.29■□□□□ 0.2
CPN2-201ENST00000323830 OFD1O75665 1012 aa16.29■□□□□ 0.2
CPN2-201ENST00000323830 CALD1Q05682 793 aaKnown RBP16.29■□□□□ 0.2
CPN2-201ENST00000323830 CDCA8Q53HL2 280 aa16.29■□□□□ 0.2
CPN2-201ENST00000323830 ZSCAN30Q86W11 494 aa16.29■□□□□ 0.2
CPN2-201ENST00000323830 NGEFQ8N5V2 710 aa16.29■□□□□ 0.2
CPN2-201ENST00000323830 PPP1R9BQ96SB3 815 aa16.29■□□□□ 0.2
CPN2-201ENST00000323830 CD2BP2O95400 341 aaKnown RBP16.28■□□□□ 0.2
CPN2-201ENST00000323830 SMC5Q8IY18 1101 aa16.28■□□□□ 0.2
CPN2-201ENST00000323830 MYO3AQ8NEV4 1616 aa16.28■□□□□ 0.2
CPN2-201ENST00000323830 NASPP49321 788 aaPredicted RBP16.27■□□□□ 0.2
CPN2-201ENST00000323830 CCDC173Q0VFZ6 552 aa16.27■□□□□ 0.2
CPN2-201ENST00000323830 TCP11L2Q8N4U5 519 aa16.27■□□□□ 0.2
CPN2-201ENST00000323830 RIMS2Q9UQ26 1411 aa16.27■□□□□ 0.2
CPN2-201ENST00000323830 PODXL2Q9NZ53 605 aa16.27■□□□□ 0.2
CPN2-201ENST00000323830 GBP4Q96PP9 640 aa16.27■□□□□ 0.19
CPN2-201ENST00000323830 SCAF11Q99590 1463 aaKnown RBP16.26■□□□□ 0.19
CPN2-201ENST00000323830 HSP90AB1P08238 724 aaKnown RBP16.26■□□□□ 0.19
CPN2-201ENST00000323830 TMEM132EQ6IEE7 984 aa16.26■□□□□ 0.19
CPN2-201ENST00000323830 SNX21Q969T3 373 aa16.26■□□□□ 0.19
CPN2-201ENST00000323830 SHPRHQ149N8 1683 aa16.26■□□□□ 0.19
CPN2-201ENST00000323830 TNNT2P45379 298 aaPredicted RBP16.25■□□□□ 0.19
CPN2-201ENST00000323830 RBM25P49756 843 aaKnown RBP16.25■□□□□ 0.19
CPN2-201ENST00000323830 FAM13BQ9NYF5 915 aa16.25■□□□□ 0.19
CPN2-201ENST00000323830 PLEKHG5O94827 1062 aa16.24■□□□□ 0.19
CPN2-201ENST00000323830 PHF23Q9BUL5 403 aaPredicted RBP16.24■□□□□ 0.19
CPN2-201ENST00000323830 SSFA2P28290 1259 aa16.24■□□□□ 0.19
CPN2-201ENST00000323830 SKOR2Q2VWA4 1001 aaPredicted RBP16.24■□□□□ 0.19
CPN2-201ENST00000323830 KIF2CQ99661 725 aa16.24■□□□□ 0.19
CPN2-201ENST00000323830 R3HCC1Q9Y3T6 440 aaKnown RBP16.24■□□□□ 0.19
CPN2-201ENST00000323830 IQSEC2Q5JU85 1478 aa16.24■□□□□ 0.19
CPN2-201ENST00000323830 KDM5AP29375 1690 aaKnown RBP16.24■□□□□ 0.19
CPN2-201ENST00000323830 AK9Q5TCS8 1911 aa16.24■□□□□ 0.19
CPN2-201ENST00000323830 CIZ1Q9ULV3 898 aaPredicted RBP16.24■□□□□ 0.19
CPN2-201ENST00000323830 POLR3AO14802 1390 aaPredicted RBP16.24■□□□□ 0.19
CPN2-201ENST00000323830 FTSJ3Q8IY81 847 aaKnown RBP16.23■□□□□ 0.19
CPN2-201ENST00000323830 RUNDC1Q96C34 613 aa16.23■□□□□ 0.19
CPN2-201ENST00000323830 C14orf93Q9H972 538 aaKnown RBP16.23■□□□□ 0.19
CPN2-201ENST00000323830 DZIP1LQ8IYY4 767 aaKnown RBP16.23■□□□□ 0.19
CPN2-201ENST00000323830 ARID3AQ99856 593 aa16.23■□□□□ 0.19
CPN2-201ENST00000323830 MSNP26038 577 aaKnown RBP16.22■□□□□ 0.19
CPN2-201ENST00000323830 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.22■□□□□ 0.19
CPN2-201ENST00000323830 RBM42Q9BTD8 480 aaKnown RBP16.22■□□□□ 0.19
CPN2-201ENST00000323830 ZFYVE9O95405 1425 aa16.22■□□□□ 0.19
CPN2-201ENST00000323830 ZKSCAN2Q63HK3 967 aa16.21■□□□□ 0.19
CPN2-201ENST00000323830 SETBP1Q9Y6X0 1596 aa16.21■□□□□ 0.19
CPN2-201ENST00000323830 HDAC1Q13547 482 aaPredicted RBP16.21■□□□□ 0.18
CPN2-201ENST00000323830 WDR63Q8IWG1 891 aa16.21■□□□□ 0.18
CPN2-201ENST00000323830 TRAK1Q9UPV9 953 aa16.21■□□□□ 0.18
CPN2-201ENST00000323830 ADGRB1O14514 1584 aa16.2■□□□□ 0.18
CPN2-201ENST00000323830 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.2■□□□□ 0.18
CPN2-201ENST00000323830 TMEM2Q9UHN6 1383 aa16.2■□□□□ 0.18
CPN2-201ENST00000323830 TRIM27P14373 513 aa16.2■□□□□ 0.18
CPN2-201ENST00000323830 CEP170BQ9Y4F5 1589 aaPredicted RBP16.2■□□□□ 0.18
CPN2-201ENST00000323830 PTPRMP28827 1452 aa16.19■□□□□ 0.18
CPN2-201ENST00000323830 XPCQ01831 940 aaPredicted RBP16.19■□□□□ 0.18
CPN2-201ENST00000323830 ITPRIPQ8IWB1 547 aa16.19■□□□□ 0.18
CPN2-201ENST00000323830 GAS2L2Q8NHY3 880 aa16.19■□□□□ 0.18
CPN2-201ENST00000323830 TSR2Q969E8 191 aaKnown RBP16.19■□□□□ 0.18
CPN2-201ENST00000323830 STK26Q9P289 416 aa16.19■□□□□ 0.18
CPN2-201ENST00000323830 DDX49Q9Y6V7 483 aaKnown RBP16.19■□□□□ 0.18
CPN2-201ENST00000323830 ALKQ9UM73 1620 aa16.19■□□□□ 0.18
CPN2-201ENST00000323830 LNPKQ9C0E8 428 aa16.19■□□□□ 0.18
CPN2-201ENST00000323830 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.17■□□□□ 0.18
CPN2-201ENST00000323830 NRXN3Q9Y4C0 1643 aa16.17■□□□□ 0.18
CPN2-201ENST00000323830 UQCRHLA0A096LP55 91 aa16.17■□□□□ 0.18
CPN2-201ENST00000323830 UQCRHP07919 91 aa16.17■□□□□ 0.18
CPN2-201ENST00000323830 TERF1P54274 439 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms