RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ARHGAP5Q13017 1502 aa17.68■□□□□ 0.42
PABPC1-201ENST00000318607 ATF7IPQ6VMQ6 1270 aa17.67■□□□□ 0.42
PABPC1-201ENST00000318607 ABCC1P33527 1531 aa17.67■□□□□ 0.42
PABPC1-201ENST00000318607 ATAD2Q6PL18 1390 aa17.67■□□□□ 0.42
PABPC1-201ENST00000318607 FSD2A1L4K1 749 aa17.66■□□□□ 0.42
PABPC1-201ENST00000318607 NSD3Q9BZ95 1437 aa17.66■□□□□ 0.42
PABPC1-201ENST00000318607 PLA2R1Q13018 1463 aa17.66■□□□□ 0.42
PABPC1-201ENST00000318607 DDX19BQ9UMR2 479 aa17.66■□□□□ 0.42
PABPC1-201ENST00000318607 C16orf71Q8IYS4 520 aaPredicted RBP17.65■□□□□ 0.42
PABPC1-201ENST00000318607 MINK1Q8N4C8 1332 aaPredicted RBP17.65■□□□□ 0.42
PABPC1-201ENST00000318607 TSC1Q92574 1164 aa17.65■□□□□ 0.42
PABPC1-201ENST00000318607 MROH2AA6NES4 1674 aa17.65■□□□□ 0.42
PABPC1-201ENST00000318607 SAMD9LQ8IVG5 1584 aa17.64■□□□□ 0.41
PABPC1-201ENST00000318607 CCDC141Q6ZP82 1450 aa17.64■□□□□ 0.41
PABPC1-201ENST00000318607 RRP9O43818 475 aaKnown RBP17.64■□□□□ 0.41
PABPC1-201ENST00000318607 CHD1LQ86WJ1 897 aa17.64■□□□□ 0.41
PABPC1-201ENST00000318607 JARID2Q92833 1246 aaPredicted RBP17.64■□□□□ 0.41
PABPC1-201ENST00000318607 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
PABPC1-201ENST00000318607 SMARCA5O60264 1052 aaPredicted RBP17.63■□□□□ 0.41
PABPC1-201ENST00000318607 TSHZ3Q63HK5 1081 aa17.62■□□□□ 0.41
PABPC1-201ENST00000318607 GDPD2Q9HCC8 539 aa17.62■□□□□ 0.41
PABPC1-201ENST00000318607 DCTN1Q14203 1278 aa17.62■□□□□ 0.41
PABPC1-201ENST00000318607 TBC1D9Q6ZT07 1266 aa17.62■□□□□ 0.41
PABPC1-201ENST00000318607 TMPOP42166 694 aaKnown RBP17.6■□□□□ 0.41
PABPC1-201ENST00000318607 ZNF830Q96NB3 372 aaPredicted RBP17.6■□□□□ 0.41
PABPC1-201ENST00000318607 NUTM2FA1L443 756 aa17.6■□□□□ 0.41
PABPC1-201ENST00000318607 ZGPATQ8N5A5 531 aaKnown RBP17.6■□□□□ 0.41
PABPC1-201ENST00000318607 SYCE3A1L190 88 aa17.59■□□□□ 0.41
PABPC1-201ENST00000318607 LARP6Q9BRS8 491 aaKnown RBP17.59■□□□□ 0.41
PABPC1-201ENST00000318607 K7ELQ4 463 aaPredicted RBP17.59■□□□□ 0.41
PABPC1-201ENST00000318607 SLC4A10Q6U841 1118 aa17.59■□□□□ 0.41
PABPC1-201ENST00000318607 ZNF428Q96B54 188 aa17.59■□□□□ 0.41
PABPC1-201ENST00000318607 ZHX1Q9UKY1 873 aaPredicted RBP17.59■□□□□ 0.41
PABPC1-201ENST00000318607 DHX37Q8IY37 1157 aaKnown RBP17.59■□□□□ 0.41
PABPC1-201ENST00000318607 OTUD7AQ8TE49 926 aaPredicted RBP17.59■□□□□ 0.41
PABPC1-201ENST00000318607 IPO8O15397 1037 aaKnown RBP17.58■□□□□ 0.4
PABPC1-201ENST00000318607 TSPYL6Q8N831 410 aa17.58■□□□□ 0.4
PABPC1-201ENST00000318607 ARHGEF12Q9NZN5 1544 aa17.58■□□□□ 0.4
PABPC1-201ENST00000318607 INSRP06213 1382 aa17.58■□□□□ 0.4
PABPC1-201ENST00000318607 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.57■□□□□ 0.4
PABPC1-201ENST00000318607 NECTIN2Q92692 538 aa17.57■□□□□ 0.4
PABPC1-201ENST00000318607 BAG4O95429 457 aaKnown RBP17.57■□□□□ 0.4
PABPC1-201ENST00000318607 WDR63Q8IWG1 891 aa17.57■□□□□ 0.4
PABPC1-201ENST00000318607 ASXL1Q8IXJ9 1541 aa17.57■□□□□ 0.4
PABPC1-201ENST00000318607 PRIM1P49642 420 aaKnown RBP17.56■□□□□ 0.4
PABPC1-201ENST00000318607 PRKAR2BP31323 418 aa17.56■□□□□ 0.4
PABPC1-201ENST00000318607 SYCP2Q9BX26 1530 aa17.56■□□□□ 0.4
PABPC1-201ENST00000318607 CHMP3Q9Y3E7 222 aa17.56■□□□□ 0.4
PABPC1-201ENST00000318607 UQCRHLA0A096LP55 91 aa17.55■□□□□ 0.4
PABPC1-201ENST00000318607 UQCRHP07919 91 aa17.55■□□□□ 0.4
PABPC1-201ENST00000318607 LMTK2Q8IWU2 1503 aa17.55■□□□□ 0.4
PABPC1-201ENST00000318607 IQGAP3Q86VI3 1631 aa17.55■□□□□ 0.4
PABPC1-201ENST00000318607 MROH1Q8NDA8 1641 aa17.55■□□□□ 0.4
PABPC1-201ENST00000318607 FAM83GA6ND36 823 aa17.54■□□□□ 0.4
PABPC1-201ENST00000318607 ZSCAN30Q86W11 494 aa17.54■□□□□ 0.4
PABPC1-201ENST00000318607 C17orf53Q8N3J3 647 aaPredicted RBP17.54■□□□□ 0.4
PABPC1-201ENST00000318607 POLR1AO95602 1720 aaPredicted RBP17.54■□□□□ 0.4
PABPC1-201ENST00000318607 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
PABPC1-201ENST00000318607 IFT172Q9UG01 1749 aa17.54■□□□□ 0.4
PABPC1-201ENST00000318607 RBSNQ9H1K0 784 aa17.53■□□□□ 0.4
PABPC1-201ENST00000318607 IGSF3O75054 1194 aa17.53■□□□□ 0.4
PABPC1-201ENST00000318607 PAXIP1Q6ZW49 1069 aaPredicted RBP17.53■□□□□ 0.4
PABPC1-201ENST00000318607 RAB3GAP1Q15042 981 aa17.52■□□□□ 0.39
PABPC1-201ENST00000318607 STAG3Q9UJ98 1225 aa17.52■□□□□ 0.39
PABPC1-201ENST00000318607 ZNF692Q9BU19 519 aaPredicted RBP17.51■□□□□ 0.39
PABPC1-201ENST00000318607 ZBTB40Q9NUA8 1239 aa17.51■□□□□ 0.39
PABPC1-201ENST00000318607 NEO1Q92859 1461 aa17.51■□□□□ 0.39
PABPC1-201ENST00000318607 FGD1P98174 961 aa17.51■□□□□ 0.39
PABPC1-201ENST00000318607 SKOR2Q2VWA4 1001 aaPredicted RBP17.51■□□□□ 0.39
PABPC1-201ENST00000318607 MIS18AQ9NYP9 233 aa17.51■□□□□ 0.39
PABPC1-201ENST00000318607 NUCB1Q02818 461 aa17.5■□□□□ 0.39
PABPC1-201ENST00000318607 DIAPH1O60610 1272 aaKnown RBP17.5■□□□□ 0.39
PABPC1-201ENST00000318607 CCDC173Q0VFZ6 552 aa17.5■□□□□ 0.39
PABPC1-201ENST00000318607 ZSCAN23Q3MJ62 389 aa17.5■□□□□ 0.39
PABPC1-201ENST00000318607 RILPL2Q969X0 211 aa17.5■□□□□ 0.39
PABPC1-201ENST00000318607 KANK1Q14678 1352 aa17.5■□□□□ 0.39
PABPC1-201ENST00000318607 KIDINS220Q9ULH0 1771 aa17.49■□□□□ 0.39
PABPC1-201ENST00000318607 NEK4P51957 841 aa17.49■□□□□ 0.39
PABPC1-201ENST00000318607 TRIM35Q9UPQ4 493 aa17.49■□□□□ 0.39
PABPC1-201ENST00000318607 SCAF11Q99590 1463 aaKnown RBP17.49■□□□□ 0.39
PABPC1-201ENST00000318607 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
PABPC1-201ENST00000318607 HAP1P54257 671 aaPredicted RBP17.49■□□□□ 0.39
PABPC1-201ENST00000318607 UPF3BQ9BZI7 483 aaKnown RBP17.49■□□□□ 0.39
PABPC1-201ENST00000318607 NSFL1CQ9UNZ2 370 aaKnown RBP17.49■□□□□ 0.39
PABPC1-201ENST00000318607 SMC5Q8IY18 1101 aa17.49■□□□□ 0.39
PABPC1-201ENST00000318607 PIK3C2GO75747 1445 aa17.48■□□□□ 0.39
PABPC1-201ENST00000318607 PHACTR3Q96KR7 559 aa17.48■□□□□ 0.39
PABPC1-201ENST00000318607 NLRP1Q9C000 1473 aa17.48■□□□□ 0.39
PABPC1-201ENST00000318607 TAOK2Q9UL54 1235 aa17.47■□□□□ 0.39
PABPC1-201ENST00000318607 AGLP35573 1532 aa17.47■□□□□ 0.39
PABPC1-201ENST00000318607 CDC45O75419 566 aa17.46■□□□□ 0.39
PABPC1-201ENST00000318607 DDX54Q8TDD1 881 aaKnown RBP17.46■□□□□ 0.39
PABPC1-201ENST00000318607 MAP4K4O95819 1239 aaPredicted RBP17.46■□□□□ 0.39
PABPC1-201ENST00000318607 HDAC1Q13547 482 aaPredicted RBP17.46■□□□□ 0.39
PABPC1-201ENST00000318607 CCDC27Q2M243 656 aa17.46■□□□□ 0.39
PABPC1-201ENST00000318607 PRDM15P57071 1507 aaPredicted RBP17.45■□□□□ 0.38
PABPC1-201ENST00000318607 KIF2CQ99661 725 aa17.45■□□□□ 0.38
PABPC1-201ENST00000318607 PIK3C2BO00750 1634 aa17.45■□□□□ 0.38
PABPC1-201ENST00000318607 TPM2P07951 284 aa17.45■□□□□ 0.38
PABPC1-201ENST00000318607 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 116.7 ms