RNA–Protein interactions for RNA: ENST00000316673.8

HNF4A-202, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,470 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-202ENST00000316673 CD163L1Q9NR16 1453 aa21.15■□□□□ 0.98
HNF4A-202ENST00000316673 DDX17Q92841 729 aaKnown RBP21.15■□□□□ 0.98
HNF4A-202ENST00000316673 A0A1W2PP64 1363 aa21.14■□□□□ 0.98
HNF4A-202ENST00000316673 ANP32CO43423 234 aa21.14■□□□□ 0.98
HNF4A-202ENST00000316673 COL16A1Q07092 1604 aaPredicted RBP21.14■□□□□ 0.97
HNF4A-202ENST00000316673 XPCQ01831 940 aaPredicted RBP21.13■□□□□ 0.97
HNF4A-202ENST00000316673 EDC4Q6P2E9 1401 aaKnown RBP21.13■□□□□ 0.97
HNF4A-202ENST00000316673 MON2Q7Z3U7 1717 aa21.13■□□□□ 0.97
HNF4A-202ENST00000316673 ARHGEF10O15013 1369 aa21.12■□□□□ 0.97
HNF4A-202ENST00000316673 SPATA31A3Q5VYP0 1347 aa21.12■□□□□ 0.97
HNF4A-202ENST00000316673 TTC21AQ8NDW8 1320 aa21.12■□□□□ 0.97
HNF4A-202ENST00000316673 TNS3Q68CZ2 1445 aa21.11■□□□□ 0.97
HNF4A-202ENST00000316673 PAK3O75914 559 aaPredicted RBP21.11■□□□□ 0.97
HNF4A-202ENST00000316673 SSH2Q76I76 1423 aa21.11■□□□□ 0.97
HNF4A-202ENST00000316673 TRPM3Q9HCF6 1732 aaPredicted RBP21.1■□□□□ 0.97
HNF4A-202ENST00000316673 JCADQ9P266 1359 aa21.1■□□□□ 0.97
HNF4A-202ENST00000316673 TTC21BQ7Z4L5 1316 aa21.09■□□□□ 0.97
HNF4A-202ENST00000316673 PANK3Q9H999 370 aa21.08■□□□□ 0.97
HNF4A-202ENST00000316673 NRKQ7Z2Y5 1582 aa21.08■□□□□ 0.96
HNF4A-202ENST00000316673 LMOD2Q6P5Q4 547 aa21.07■□□□□ 0.96
HNF4A-202ENST00000316673 MIER1Q8N108 512 aa21.07■□□□□ 0.96
HNF4A-202ENST00000316673 ABTB2Q8N961 1025 aa21.07■□□□□ 0.96
HNF4A-202ENST00000316673 ALS2Q96Q42 1657 aa21.06■□□□□ 0.96
HNF4A-202ENST00000316673 SHPRHQ149N8 1683 aa21.05■□□□□ 0.96
HNF4A-202ENST00000316673 PNPLA6Q8IY17 1366 aa21.04■□□□□ 0.96
HNF4A-202ENST00000316673 NLRP13Q86W25 1043 aa21.04■□□□□ 0.96
HNF4A-202ENST00000316673 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.04■□□□□ 0.96
HNF4A-202ENST00000316673 CARD14Q9BXL6 1004 aa21.04■□□□□ 0.96
HNF4A-202ENST00000316673 KNSTRNQ9Y448 316 aa21.04■□□□□ 0.96
HNF4A-202ENST00000316673 NSD3Q9BZ95 1437 aa21.04■□□□□ 0.96
HNF4A-202ENST00000316673 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
HNF4A-202ENST00000316673 SPATA31A6Q5VVP1 1343 aa21.03■□□□□ 0.96
HNF4A-202ENST00000316673 COL22A1Q8NFW1 1626 aaPredicted RBP21.02■□□□□ 0.96
HNF4A-202ENST00000316673 USP31Q70CQ4 1352 aa21.01■□□□□ 0.95
HNF4A-202ENST00000316673 NLRP6P59044 892 aa21.01■□□□□ 0.95
HNF4A-202ENST00000316673 NSD2O96028 1365 aa20.99■□□□□ 0.95
HNF4A-202ENST00000316673 PIK3C2AO00443 1686 aa20.99■□□□□ 0.95
HNF4A-202ENST00000316673 PER1O15534 1290 aaPredicted RBP20.98■□□□□ 0.95
HNF4A-202ENST00000316673 CCER2I3L3R5 266 aa20.97■□□□□ 0.95
HNF4A-202ENST00000316673 FYB1O15117 783 aa20.97■□□□□ 0.95
HNF4A-202ENST00000316673 NME9Q86XW9 330 aa20.97■□□□□ 0.95
HNF4A-202ENST00000316673 COG3Q96JB2 828 aa20.97■□□□□ 0.95
HNF4A-202ENST00000316673 USP19O94966 1318 aa20.97■□□□□ 0.95
HNF4A-202ENST00000316673 USP54Q70EL1 1684 aa20.96■□□□□ 0.95
HNF4A-202ENST00000316673 HAP1P54257 671 aaPredicted RBP20.96■□□□□ 0.95
HNF4A-202ENST00000316673 KCNH5Q8NCM2 988 aa20.96■□□□□ 0.95
HNF4A-202ENST00000316673 KIF20BQ96Q89 1820 aa20.96■□□□□ 0.95
HNF4A-202ENST00000316673 NUTM2GQ5VZR2 741 aa20.95■□□□□ 0.94
HNF4A-202ENST00000316673 NPC1L1Q9UHC9 1359 aa20.95■□□□□ 0.94
HNF4A-202ENST00000316673 OVOS2A0A0J9YW53 1432 aa20.94■□□□□ 0.94
HNF4A-202ENST00000316673 OVOS2Q6IE36 1432 aa20.94■□□□□ 0.94
HNF4A-202ENST00000316673 RGS17Q9UGC6 210 aaPredicted RBP20.93■□□□□ 0.94
HNF4A-202ENST00000316673 SLIT3O75094 1523 aa20.92■□□□□ 0.94
HNF4A-202ENST00000316673 AMER1Q5JTC6 1135 aaPredicted RBP20.92■□□□□ 0.94
HNF4A-202ENST00000316673 GGNBP2Q9H3C7 697 aa20.92■□□□□ 0.94
HNF4A-202ENST00000316673 GCP02774 474 aa20.91■□□□□ 0.94
HNF4A-202ENST00000316673 CRYBG1Q9Y4K1 1723 aa20.91■□□□□ 0.94
HNF4A-202ENST00000316673 CABLES1Q8TDN4 633 aa20.9■□□□□ 0.94
HNF4A-202ENST00000316673 ABCA3Q99758 1704 aa20.9■□□□□ 0.94
HNF4A-202ENST00000316673 PHRF1Q9P1Y6 1649 aaKnown RBP20.9■□□□□ 0.94
HNF4A-202ENST00000316673 NUTM2BA6NNL0 878 aaPredicted RBP20.89■□□□□ 0.94
HNF4A-202ENST00000316673 NUTM2EB1AL46 878 aaPredicted RBP20.89■□□□□ 0.94
HNF4A-202ENST00000316673 NUTM2AQ8IVF1 878 aaPredicted RBP20.89■□□□□ 0.94
HNF4A-202ENST00000316673 PRKRIP1Q9H875 184 aaPredicted RBP20.89■□□□□ 0.94
HNF4A-202ENST00000316673 ANKRD26Q9UPS8 1709 aa20.89■□□□□ 0.94
HNF4A-202ENST00000316673 MARF1Q9Y4F3 1742 aaKnown RBP20.89■□□□□ 0.93
HNF4A-202ENST00000316673 RALBP1Q15311 655 aa20.88■□□□□ 0.93
HNF4A-202ENST00000316673 ZRANB1Q9UGI0 708 aa20.88■□□□□ 0.93
HNF4A-202ENST00000316673 CPDO75976 1380 aa20.87■□□□□ 0.93
HNF4A-202ENST00000316673 PLEKHG5O94827 1062 aa20.87■□□□□ 0.93
HNF4A-202ENST00000316673 MORC1Q86VD1 984 aa20.87■□□□□ 0.93
HNF4A-202ENST00000316673 MEX3CQ5U5Q3 659 aaKnown RBP20.86■□□□□ 0.93
HNF4A-202ENST00000316673 NFAT5O94916 1531 aa20.84■□□□□ 0.93
HNF4A-202ENST00000316673 LRP6O75581 1613 aa20.84■□□□□ 0.93
HNF4A-202ENST00000316673 ADAMTS2O95450 1211 aa20.83■□□□□ 0.93
HNF4A-202ENST00000316673 CC2D1BQ5T0F9 858 aaKnown RBP20.83■□□□□ 0.93
HNF4A-202ENST00000316673 PRDM11Q9NQV5 511 aa20.83■□□□□ 0.93
HNF4A-202ENST00000316673 AATKQ6ZMQ8 1374 aa20.83■□□□□ 0.93
HNF4A-202ENST00000316673 KIAA0232Q92628 1395 aa20.82■□□□□ 0.92
HNF4A-202ENST00000316673 ZC3H6P61129 1189 aaKnown RBP20.82■□□□□ 0.92
HNF4A-202ENST00000316673 SOX12O15370 315 aa20.81■□□□□ 0.92
HNF4A-202ENST00000316673 ARHGEF25Q86VW2 580 aa20.81■□□□□ 0.92
HNF4A-202ENST00000316673 KIF24Q5T7B8 1368 aa20.81■□□□□ 0.92
HNF4A-202ENST00000316673 ABCC6O95255 1503 aa20.81■□□□□ 0.92
HNF4A-202ENST00000316673 POTEAQ6S8J7 498 aa20.81■□□□□ 0.92
HNF4A-202ENST00000316673 COL14A1Q05707 1796 aaKnown RBP20.79■□□□□ 0.92
HNF4A-202ENST00000316673 NGLY1Q96IV0 654 aa20.79■□□□□ 0.92
HNF4A-202ENST00000316673 FAM83GA6ND36 823 aa20.78■□□□□ 0.92
HNF4A-202ENST00000316673 C8orf37Q96NL8 207 aa20.78■□□□□ 0.92
HNF4A-202ENST00000316673 MYBBP1AQ9BQG0 1328 aaKnown RBP20.78■□□□□ 0.92
HNF4A-202ENST00000316673 RTL1A6NKG5 1358 aa20.78■□□□□ 0.92
HNF4A-202ENST00000316673 TNNT2P45379 298 aaPredicted RBP20.76■□□□□ 0.91
HNF4A-202ENST00000316673 MAP3K19Q56UN5 1328 aa20.76■□□□□ 0.91
HNF4A-202ENST00000316673 PARD3Q8TEW0 1356 aa20.76■□□□□ 0.91
HNF4A-202ENST00000316673 LTN1O94822 1766 aa20.76■□□□□ 0.91
HNF4A-202ENST00000316673 AMPHP49418 695 aa20.75■□□□□ 0.91
HNF4A-202ENST00000316673 FNBP4Q8N3X1 1017 aaPredicted RBP20.75■□□□□ 0.91
HNF4A-202ENST00000316673 ZBTB7CA1YPR0 619 aa20.75■□□□□ 0.91
HNF4A-202ENST00000316673 NWD2Q9ULI1 1742 aa20.75■□□□□ 0.91
HNF4A-202ENST00000316673 MAP2P11137 1827 aaKnown RBP20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms