RNA–Protein interactions for RNA: ENST00000313401.3

CDK5R1-201, Transcript of cyclin dependent kinase 5 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5R1, Length 4,325 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5R1-201ENST00000313401 ZNF428Q96B54 188 aa22.72■■□□□ 1.23
CDK5R1-201ENST00000313401 FCHSD2O94868 740 aa22.72■■□□□ 1.23
CDK5R1-201ENST00000313401 MSNP26038 577 aaKnown RBP22.72■■□□□ 1.23
CDK5R1-201ENST00000313401 ST18O60284 1047 aa22.71■■□□□ 1.23
CDK5R1-201ENST00000313401 ZRANB1Q9UGI0 708 aa22.71■■□□□ 1.23
CDK5R1-201ENST00000313401 TBC1D32Q96NH3 1257 aa22.71■■□□□ 1.23
CDK5R1-201ENST00000313401 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.7■■□□□ 1.23
CDK5R1-201ENST00000313401 POLR3AO14802 1390 aaPredicted RBP22.7■■□□□ 1.22
CDK5R1-201ENST00000313401 MCM10Q7L590 875 aa22.7■■□□□ 1.22
CDK5R1-201ENST00000313401 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.7■■□□□ 1.22
CDK5R1-201ENST00000313401 MCTP1Q6DN14 999 aa22.69■■□□□ 1.22
CDK5R1-201ENST00000313401 NFE2L2Q16236 605 aa22.69■■□□□ 1.22
CDK5R1-201ENST00000313401 SLC26A8Q96RN1 970 aa22.69■■□□□ 1.22
CDK5R1-201ENST00000313401 CDC45O75419 566 aa22.68■■□□□ 1.22
CDK5R1-201ENST00000313401 SLC4A2P04920 1241 aa22.68■■□□□ 1.22
CDK5R1-201ENST00000313401 ATAD2Q6PL18 1390 aa22.68■■□□□ 1.22
CDK5R1-201ENST00000313401 EIF2AK4Q9P2K8 1649 aaKnown RBP22.68■■□□□ 1.22
CDK5R1-201ENST00000313401 A0A0G2JS52 829 aa22.68■■□□□ 1.22
CDK5R1-201ENST00000313401 CT47B1P0C2W7 299 aaPredicted RBP22.68■■□□□ 1.22
CDK5R1-201ENST00000313401 ANO2Q9NQ90 1003 aa22.68■■□□□ 1.22
CDK5R1-201ENST00000313401 KDM5DQ9BY66 1539 aa22.67■■□□□ 1.22
CDK5R1-201ENST00000313401 RTEL1-TNFRSF6BF6WH68 1400 aa22.67■■□□□ 1.22
CDK5R1-201ENST00000313401 WDR7Q9Y4E6 1490 aa22.66■■□□□ 1.22
CDK5R1-201ENST00000313401 SMARCA5O60264 1052 aaPredicted RBP22.66■■□□□ 1.22
CDK5R1-201ENST00000313401 EID1Q9Y6B2 187 aa22.66■■□□□ 1.22
CDK5R1-201ENST00000313401 ZNF521Q96K83 1311 aa22.66■■□□□ 1.22
CDK5R1-201ENST00000313401 KIAA1211Q6ZU35 1233 aa22.66■■□□□ 1.22
CDK5R1-201ENST00000313401 CDC42BPAQ5VT25 1732 aa22.65■■□□□ 1.22
CDK5R1-201ENST00000313401 ASXL2Q76L83 1435 aa22.65■■□□□ 1.22
CDK5R1-201ENST00000313401 ABCC2Q92887 1545 aa22.65■■□□□ 1.22
CDK5R1-201ENST00000313401 UGGT1Q9NYU2 1555 aa22.65■■□□□ 1.22
CDK5R1-201ENST00000313401 TSPYL6Q8N831 410 aa22.64■■□□□ 1.22
CDK5R1-201ENST00000313401 NUDT16Q96DE0 195 aaKnown RBP22.64■■□□□ 1.22
CDK5R1-201ENST00000313401 NCKAP5LQ9HCH0 1330 aa22.64■■□□□ 1.22
CDK5R1-201ENST00000313401 MAST1Q9Y2H9 1570 aa22.64■■□□□ 1.22
CDK5R1-201ENST00000313401 TTC37Q6PGP7 1564 aa22.64■■□□□ 1.21
CDK5R1-201ENST00000313401 GCC1Q96CN9 775 aa22.64■■□□□ 1.21
CDK5R1-201ENST00000313401 NAP1L2Q9ULW6 460 aaPredicted RBP22.64■■□□□ 1.21
CDK5R1-201ENST00000313401 PHACTR3Q96KR7 559 aa22.63■■□□□ 1.21
CDK5R1-201ENST00000313401 CFAP44Q96MT7 982 aa22.63■■□□□ 1.21
CDK5R1-201ENST00000313401 ARHGEF5Q12774 1597 aa22.63■■□□□ 1.21
CDK5R1-201ENST00000313401 INTS3Q68E01 1043 aaKnown RBP22.62■■□□□ 1.21
CDK5R1-201ENST00000313401 TRHP20396 242 aaPredicted RBP22.61■■□□□ 1.21
CDK5R1-201ENST00000313401 NLRP6P59044 892 aa22.61■■□□□ 1.21
CDK5R1-201ENST00000313401 ATP10AO60312 1499 aa22.61■■□□□ 1.21
CDK5R1-201ENST00000313401 RBM42Q9BTD8 480 aaKnown RBP22.61■■□□□ 1.21
CDK5R1-201ENST00000313401 ANKRD36BQ8N2N9 1353 aa22.6■■□□□ 1.21
CDK5R1-201ENST00000313401 REC8O95072 547 aa22.6■■□□□ 1.21
CDK5R1-201ENST00000313401 FGD1P98174 961 aa22.6■■□□□ 1.21
CDK5R1-201ENST00000313401 F6X3S4 739 aa22.6■■□□□ 1.21
CDK5R1-201ENST00000313401 KRT24Q2M2I5 525 aa22.6■■□□□ 1.21
CDK5R1-201ENST00000313401 CCDC9Q9Y3X0 531 aaKnown RBP22.6■■□□□ 1.21
CDK5R1-201ENST00000313401 MBIPQ9NS73 344 aa22.59■■□□□ 1.21
CDK5R1-201ENST00000313401 CCDC61Q9Y6R9 512 aa22.59■■□□□ 1.21
CDK5R1-201ENST00000313401 A0A1W2PP64 1363 aa22.59■■□□□ 1.21
CDK5R1-201ENST00000313401 CAVIN1Q6NZI2 390 aaKnown RBP22.58■■□□□ 1.21
CDK5R1-201ENST00000313401 NEK4P51957 841 aa22.58■■□□□ 1.21
CDK5R1-201ENST00000313401 TRMT2AQ8IZ69 625 aaKnown RBP22.58■■□□□ 1.2
CDK5R1-201ENST00000313401 EXOC6BQ9Y2D4 811 aa22.58■■□□□ 1.2
CDK5R1-201ENST00000313401 MRE11P49959 708 aa22.57■■□□□ 1.2
CDK5R1-201ENST00000313401 ERCC6L2Q5T890 1561 aa22.57■■□□□ 1.2
CDK5R1-201ENST00000313401 PTPRTO14522 1441 aa22.57■■□□□ 1.2
CDK5R1-201ENST00000313401 POLKQ9UBT6 870 aa22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 K7ELQ4 463 aaPredicted RBP22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 SKOR2Q2VWA4 1001 aaPredicted RBP22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 NPC1L1Q9UHC9 1359 aa22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 C8orf58Q8NAV2 365 aa22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 RNF214Q8ND24 703 aa22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 TRIM35Q9UPQ4 493 aa22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 CCDC27Q2M243 656 aa22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 PANK2Q9BZ23 570 aa22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 RSPH6AQ9H0K4 717 aa22.56■■□□□ 1.2
CDK5R1-201ENST00000313401 TBC1D9Q6ZT07 1266 aa22.55■■□□□ 1.2
CDK5R1-201ENST00000313401 AEBP1Q8IUX7 1158 aa22.55■■□□□ 1.2
CDK5R1-201ENST00000313401 PTMSP20962 102 aa22.54■■□□□ 1.2
CDK5R1-201ENST00000313401 TSHZ3Q63HK5 1081 aa22.54■■□□□ 1.2
CDK5R1-201ENST00000313401 PRPF40AO75400 957 aaKnown RBP22.54■■□□□ 1.2
CDK5R1-201ENST00000313401 ALDH1L2Q3SY69 923 aa22.53■■□□□ 1.2
CDK5R1-201ENST00000313401 MAP4K4O95819 1239 aaPredicted RBP22.53■■□□□ 1.2
CDK5R1-201ENST00000313401 C16orf71Q8IYS4 520 aaPredicted RBP22.53■■□□□ 1.2
CDK5R1-201ENST00000313401 TNPO1Q92973 898 aaKnown RBP22.53■■□□□ 1.2
CDK5R1-201ENST00000313401 GRPEL1Q9HAV7 217 aa22.52■■□□□ 1.2
CDK5R1-201ENST00000313401 SSFA2P28290 1259 aa22.52■■□□□ 1.2
CDK5R1-201ENST00000313401 HDAC1Q13547 482 aaPredicted RBP22.52■■□□□ 1.2
CDK5R1-201ENST00000313401 ERVK-7P63135 1459 aa22.52■■□□□ 1.2
CDK5R1-201ENST00000313401 GOLGA6L4A6NEF3 574 aa22.51■■□□□ 1.19
CDK5R1-201ENST00000313401 TEFQ10587 303 aa22.51■■□□□ 1.19
CDK5R1-201ENST00000313401 IL1RAPL2Q9NP60 686 aa22.51■■□□□ 1.19
CDK5R1-201ENST00000313401 ZBTB40Q9NUA8 1239 aa22.51■■□□□ 1.19
CDK5R1-201ENST00000313401 CHMP3Q9Y3E7 222 aa22.51■■□□□ 1.19
CDK5R1-201ENST00000313401 PRDM15P57071 1507 aaPredicted RBP22.51■■□□□ 1.19
CDK5R1-201ENST00000313401 WASLO00401 505 aaPredicted RBP22.51■■□□□ 1.19
CDK5R1-201ENST00000313401 MPNDQ8N594 471 aa22.51■■□□□ 1.19
CDK5R1-201ENST00000313401 ZNF330Q9Y3S2 320 aaPredicted RBP22.51■■□□□ 1.19
CDK5R1-201ENST00000313401 ABCC11Q96J66 1382 aa22.5■■□□□ 1.19
CDK5R1-201ENST00000313401 NUCB1Q02818 461 aa22.5■■□□□ 1.19
CDK5R1-201ENST00000313401 NASPP49321 788 aaPredicted RBP22.5■■□□□ 1.19
CDK5R1-201ENST00000313401 FAM43AQ8N2R8 423 aa22.5■■□□□ 1.19
CDK5R1-201ENST00000313401 IFT57Q9NWB7 429 aa22.5■■□□□ 1.19
CDK5R1-201ENST00000313401 SURF6O75683 361 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms