RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 TRPC5Q9UL62 973 aaPredicted RBP20.89■□□□□ 0.93
PPP1CA-201ENST00000312989 SSH2Q76I76 1423 aa20.88■□□□□ 0.93
PPP1CA-201ENST00000312989 SRPK2P78362 688 aaKnown RBP20.88■□□□□ 0.93
PPP1CA-201ENST00000312989 LMOD2Q6P5Q4 547 aa20.87■□□□□ 0.93
PPP1CA-201ENST00000312989 GLI3P10071 1580 aa20.87■□□□□ 0.93
PPP1CA-201ENST00000312989 CARD11Q9BXL7 1154 aa20.86■□□□□ 0.93
PPP1CA-201ENST00000312989 FAM83GA6ND36 823 aa20.85■□□□□ 0.93
PPP1CA-201ENST00000312989 EVC2Q86UK5 1308 aa20.85■□□□□ 0.93
PPP1CA-201ENST00000312989 PLCH1Q4KWH8 1693 aa20.85■□□□□ 0.93
PPP1CA-201ENST00000312989 PLEKHG5O94827 1062 aa20.85■□□□□ 0.93
PPP1CA-201ENST00000312989 UNC5CLQ8IV45 518 aa20.85■□□□□ 0.93
PPP1CA-201ENST00000312989 CABP1Q9NZU7 370 aa20.85■□□□□ 0.93
PPP1CA-201ENST00000312989 USP6P35125 1406 aa20.84■□□□□ 0.93
PPP1CA-201ENST00000312989 PHRF1Q9P1Y6 1649 aaKnown RBP20.84■□□□□ 0.93
PPP1CA-201ENST00000312989 PCGF6Q9BYE7 350 aa20.84■□□□□ 0.93
PPP1CA-201ENST00000312989 PAK3O75914 559 aaPredicted RBP20.83■□□□□ 0.92
PPP1CA-201ENST00000312989 GJD4Q96KN9 370 aaPredicted RBP20.83■□□□□ 0.92
PPP1CA-201ENST00000312989 USP19O94966 1318 aa20.83■□□□□ 0.92
PPP1CA-201ENST00000312989 NRAPQ86VF7 1730 aa20.82■□□□□ 0.92
PPP1CA-201ENST00000312989 NRKQ7Z2Y5 1582 aa20.82■□□□□ 0.92
PPP1CA-201ENST00000312989 NWD2Q9ULI1 1742 aa20.81■□□□□ 0.92
PPP1CA-201ENST00000312989 CPSF1Q10570 1443 aaKnown RBP20.81■□□□□ 0.92
PPP1CA-201ENST00000312989 CLSPNQ9HAW4 1339 aa20.81■□□□□ 0.92
PPP1CA-201ENST00000312989 BRD4O60885 1362 aaPredicted RBP20.8■□□□□ 0.92
PPP1CA-201ENST00000312989 UPF1Q92900 1129 aaKnown RBP eCLIP20.8■□□□□ 0.924e-7■■■■■ 28.3
PPP1CA-201ENST00000312989 TESK2Q96S53 571 aa20.8■□□□□ 0.92
PPP1CA-201ENST00000312989 CD163L1Q9NR16 1453 aa20.79■□□□□ 0.92
PPP1CA-201ENST00000312989 HAP1P54257 671 aaPredicted RBP20.79■□□□□ 0.92
PPP1CA-201ENST00000312989 VPS72Q15906 364 aa20.79■□□□□ 0.92
PPP1CA-201ENST00000312989 ATAD2Q6PL18 1390 aa20.78■□□□□ 0.92
PPP1CA-201ENST00000312989 COL14A1Q05707 1796 aaKnown RBP20.78■□□□□ 0.92
PPP1CA-201ENST00000312989 NUTM2GQ5VZR2 741 aa20.78■□□□□ 0.92
PPP1CA-201ENST00000312989 KIAA0232Q92628 1395 aa20.77■□□□□ 0.92
PPP1CA-201ENST00000312989 EP400Q96L91 3159 aa20.77■□□□□ 0.92
PPP1CA-201ENST00000312989 SLIT3O75094 1523 aa20.75■□□□□ 0.91
PPP1CA-201ENST00000312989 PIK3C2AO00443 1686 aa20.75■□□□□ 0.91
PPP1CA-201ENST00000312989 CPDO75976 1380 aa20.75■□□□□ 0.91
PPP1CA-201ENST00000312989 ONECUT3O60422 494 aaPredicted RBP20.74■□□□□ 0.91
PPP1CA-201ENST00000312989 ABTB2Q8N961 1025 aa20.74■□□□□ 0.91
PPP1CA-201ENST00000312989 BTG4Q9NY30 223 aa20.74■□□□□ 0.91
PPP1CA-201ENST00000312989 ST20-MTHFSA0A0A6YYL1 179 aa20.73■□□□□ 0.91
PPP1CA-201ENST00000312989 TIMELESSQ9UNS1 1208 aa20.73■□□□□ 0.91
PPP1CA-201ENST00000312989 LMO7Q8WWI1 1683 aa20.73■□□□□ 0.91
PPP1CA-201ENST00000312989 AKAP12Q02952 1782 aa20.73■□□□□ 0.91
PPP1CA-201ENST00000312989 PRDM11Q9NQV5 511 aa20.72■□□□□ 0.91
PPP1CA-201ENST00000312989 TTC21BQ7Z4L5 1316 aa20.71■□□□□ 0.91
PPP1CA-201ENST00000312989 CHRNA2Q15822 529 aa20.71■□□□□ 0.91
PPP1CA-201ENST00000312989 PUS7Q96PZ0 661 aaKnown RBP20.71■□□□□ 0.91
PPP1CA-201ENST00000312989 ZC3H6P61129 1189 aaKnown RBP20.7■□□□□ 0.9
PPP1CA-201ENST00000312989 USP47Q96K76 1375 aa20.7■□□□□ 0.9
PPP1CA-201ENST00000312989 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.9
PPP1CA-201ENST00000312989 MON2Q7Z3U7 1717 aa20.69■□□□□ 0.9
PPP1CA-201ENST00000312989 GCP02774 474 aa20.69■□□□□ 0.9
PPP1CA-201ENST00000312989 NLRP13Q86W25 1043 aa20.69■□□□□ 0.9
PPP1CA-201ENST00000312989 SPATA31A5Q5VU36 1347 aa20.68■□□□□ 0.9
PPP1CA-201ENST00000312989 SPATA31A7Q8IWB4 1347 aa20.68■□□□□ 0.9
PPP1CA-201ENST00000312989 ZNF692Q9BU19 519 aaPredicted RBP20.68■□□□□ 0.9
PPP1CA-201ENST00000312989 SLC12A5Q9H2X9 1139 aa20.67■□□□□ 0.9
PPP1CA-201ENST00000312989 KTN1Q86UP2 1357 aaKnown RBP20.66■□□□□ 0.9
PPP1CA-201ENST00000312989 SEPT12Q8IYM1 358 aa20.66■□□□□ 0.9
PPP1CA-201ENST00000312989 TTC21AQ8NDW8 1320 aa20.66■□□□□ 0.9
PPP1CA-201ENST00000312989 NLRP6P59044 892 aa20.65■□□□□ 0.9
PPP1CA-201ENST00000312989 THSD7AQ9UPZ6 1657 aa20.65■□□□□ 0.9
PPP1CA-201ENST00000312989 NFAT5O94916 1531 aa20.65■□□□□ 0.9
PPP1CA-201ENST00000312989 A0A1W2PP64 1363 aa20.64■□□□□ 0.9
PPP1CA-201ENST00000312989 USP31Q70CQ4 1352 aa20.64■□□□□ 0.89
PPP1CA-201ENST00000312989 COL5A2P05997 1499 aaPredicted RBP20.63■□□□□ 0.89
PPP1CA-201ENST00000312989 USP54Q70EL1 1684 aa20.63■□□□□ 0.89
PPP1CA-201ENST00000312989 SPATA31A1Q5TZJ5 1347 aa20.63■□□□□ 0.89
PPP1CA-201ENST00000312989 ZRANB1Q9UGI0 708 aa20.62■□□□□ 0.89
PPP1CA-201ENST00000312989 COL18A1P39060 1754 aa20.61■□□□□ 0.89
PPP1CA-201ENST00000312989 BRWD3Q6RI45 1802 aa20.61■□□□□ 0.89
PPP1CA-201ENST00000312989 FAM98CQ17RN3 349 aaKnown RBP20.61■□□□□ 0.89
PPP1CA-201ENST00000312989 AATKQ6ZMQ8 1374 aa20.61■□□□□ 0.89
PPP1CA-201ENST00000312989 CCDC9Q9Y3X0 531 aaKnown RBP20.6■□□□□ 0.89
PPP1CA-201ENST00000312989 NINLQ9Y2I6 1382 aa20.6■□□□□ 0.89
PPP1CA-201ENST00000312989 EDC4Q6P2E9 1401 aaKnown RBP20.6■□□□□ 0.89
PPP1CA-201ENST00000312989 ARHGEF25Q86VW2 580 aa20.59■□□□□ 0.89
PPP1CA-201ENST00000312989 LARP1Q6PKG0 1096 aaKnown RBP20.59■□□□□ 0.89
PPP1CA-201ENST00000312989 NME9Q86XW9 330 aa20.59■□□□□ 0.89
PPP1CA-201ENST00000312989 TMC1Q8TDI8 760 aa20.59■□□□□ 0.89
PPP1CA-201ENST00000312989 STRN4Q9NRL3 753 aa20.59■□□□□ 0.89
PPP1CA-201ENST00000312989 OVOS2A0A0J9YW53 1432 aa20.58■□□□□ 0.89
PPP1CA-201ENST00000312989 OVOS2Q6IE36 1432 aa20.58■□□□□ 0.89
PPP1CA-201ENST00000312989 AXIN2Q9Y2T1 843 aa20.58■□□□□ 0.88
PPP1CA-201ENST00000312989 CCER1Q8TC90 406 aaPredicted RBP20.57■□□□□ 0.88
PPP1CA-201ENST00000312989 KRT27Q7Z3Y8 459 aa20.56■□□□□ 0.88
PPP1CA-201ENST00000312989 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.56■□□□□ 0.88
PPP1CA-201ENST00000312989 SLC24A1O60721 1099 aa20.55■□□□□ 0.88
PPP1CA-201ENST00000312989 ANKRD36BQ8N2N9 1353 aa20.54■□□□□ 0.88
PPP1CA-201ENST00000312989 TMF1P82094 1093 aa20.54■□□□□ 0.88
PPP1CA-201ENST00000312989 BARGINQ6ZT62 677 aa20.54■□□□□ 0.88
PPP1CA-201ENST00000312989 HDGFL2Q7Z4V5 671 aaPredicted RBP20.54■□□□□ 0.88
PPP1CA-201ENST00000312989 KCNH5Q8NCM2 988 aa20.54■□□□□ 0.88
PPP1CA-201ENST00000312989 TERF2IPQ9NYB0 399 aa20.54■□□□□ 0.88
PPP1CA-201ENST00000312989 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
PPP1CA-201ENST00000312989 ABCC6O95255 1503 aa20.52■□□□□ 0.88
PPP1CA-201ENST00000312989 CRB1P82279 1406 aa20.52■□□□□ 0.88
PPP1CA-201ENST00000312989 MYOM1P52179 1685 aa20.5■□□□□ 0.87
PPP1CA-201ENST00000312989 SOX12O15370 315 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms