RNA–Protein interactions for RNA: ENST00000312521.8

NR1D2-201, Transcript of nuclear receptor subfamily 1 group D member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D2, Length 5,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D2-201ENST00000312521 RNF214Q8ND24 703 aa22.7■■□□□ 1.23
NR1D2-201ENST00000312521 CASKIN1Q8WXD9 1431 aa22.7■■□□□ 1.22
NR1D2-201ENST00000312521 HSP90B2PQ58FF3 399 aa22.7■■□□□ 1.22
NR1D2-201ENST00000312521 ESCO1Q5FWF5 840 aa22.7■■□□□ 1.22
NR1D2-201ENST00000312521 KIF6Q6ZMV9 814 aa22.7■■□□□ 1.22
NR1D2-201ENST00000312521 PATL2C9JE40 543 aaKnown RBP22.69■■□□□ 1.22
NR1D2-201ENST00000312521 SCAPERQ9BY12 1400 aa22.69■■□□□ 1.22
NR1D2-201ENST00000312521 TRAK2O60296 914 aa22.69■■□□□ 1.22
NR1D2-201ENST00000312521 MTMR7Q9Y216 660 aa22.69■■□□□ 1.22
NR1D2-201ENST00000312521 PRAM1Q96QH2 718 aa22.69■■□□□ 1.22
NR1D2-201ENST00000312521 HFM1A2PYH4 1435 aa22.68■■□□□ 1.22
NR1D2-201ENST00000312521 CCDC173Q0VFZ6 552 aa22.68■■□□□ 1.22
NR1D2-201ENST00000312521 IKQ13123 557 aaPredicted RBP22.68■■□□□ 1.22
NR1D2-201ENST00000312521 CNKSR2Q8WXI2 1034 aa22.68■■□□□ 1.22
NR1D2-201ENST00000312521 SLC3A2P08195 630 aaKnown RBP22.68■■□□□ 1.22
NR1D2-201ENST00000312521 TRIM5Q9C035 493 aa22.68■■□□□ 1.22
NR1D2-201ENST00000312521 HDGFL1Q5TGJ6 251 aa22.67■■□□□ 1.22
NR1D2-201ENST00000312521 ATP2B1P20020 1258 aa22.67■■□□□ 1.22
NR1D2-201ENST00000312521 FAM177BA6PVY3 158 aa22.66■■□□□ 1.22
NR1D2-201ENST00000312521 SLC4A2P04920 1241 aa22.66■■□□□ 1.22
NR1D2-201ENST00000312521 TATP17735 454 aaPredicted RBP22.66■■□□□ 1.22
NR1D2-201ENST00000312521 CAVIN1Q6NZI2 390 aaKnown RBP22.66■■□□□ 1.22
NR1D2-201ENST00000312521 RBM42Q9BTD8 480 aaKnown RBP22.66■■□□□ 1.22
NR1D2-201ENST00000312521 ZNF692Q9BU19 519 aaPredicted RBP22.66■■□□□ 1.22
NR1D2-201ENST00000312521 PROSER2Q86WR7 435 aaPredicted RBP22.66■■□□□ 1.22
NR1D2-201ENST00000312521 CCDC158Q5M9N0 1113 aa22.65■■□□□ 1.22
NR1D2-201ENST00000312521 ZNF396Q96N95 335 aaPredicted RBP22.65■■□□□ 1.22
NR1D2-201ENST00000312521 CCT4P50991 539 aaKnown RBP22.65■■□□□ 1.22
NR1D2-201ENST00000312521 NOB1Q9ULX3 412 aaKnown RBP22.65■■□□□ 1.22
NR1D2-201ENST00000312521 KIF21BO75037 1637 aa22.65■■□□□ 1.22
NR1D2-201ENST00000312521 NBPF1Q3BBV0 1214 aa22.65■■□□□ 1.22
NR1D2-201ENST00000312521 KLHL34Q8N239 644 aa22.65■■□□□ 1.22
NR1D2-201ENST00000312521 PNISRQ8TF01 805 aaKnown RBP22.65■■□□□ 1.22
NR1D2-201ENST00000312521 ARHGAP5Q13017 1502 aa22.65■■□□□ 1.22
NR1D2-201ENST00000312521 SMG6Q86US8 1419 aaKnown RBP22.64■■□□□ 1.22
NR1D2-201ENST00000312521 SLC12A5Q9H2X9 1139 aa22.64■■□□□ 1.22
NR1D2-201ENST00000312521 CT47B1P0C2W7 299 aaPredicted RBP22.64■■□□□ 1.21
NR1D2-201ENST00000312521 TXLNAP40222 546 aa22.64■■□□□ 1.21
NR1D2-201ENST00000312521 C1orf115Q9H7X2 142 aa22.64■■□□□ 1.21
NR1D2-201ENST00000312521 AQRO60306 1485 aaKnown RBP eCLIP22.64■■□□□ 1.21
NR1D2-201ENST00000312521 FILIP1LQ4L180 1135 aa22.64■■□□□ 1.21
NR1D2-201ENST00000312521 SULT6B1Q6IMI4 303 aa22.64■■□□□ 1.21
NR1D2-201ENST00000312521 PRPF40AO75400 957 aaKnown RBP22.63■■□□□ 1.21
NR1D2-201ENST00000312521 STK38Q15208 465 aa22.63■■□□□ 1.21
NR1D2-201ENST00000312521 CNNM1Q9NRU3 951 aa22.63■■□□□ 1.21
NR1D2-201ENST00000312521 KDM4AO75164 1064 aa22.63■■□□□ 1.21
NR1D2-201ENST00000312521 TSR2Q969E8 191 aaKnown RBP22.63■■□□□ 1.21
NR1D2-201ENST00000312521 GNL3LQ9NVN8 582 aaKnown RBP22.63■■□□□ 1.21
NR1D2-201ENST00000312521 RRP12Q5JTH9 1297 aaKnown RBP22.62■■□□□ 1.21
NR1D2-201ENST00000312521 ZFYVE27Q5T4F4 411 aa22.62■■□□□ 1.21
NR1D2-201ENST00000312521 JMYQ8N9B5 988 aa22.62■■□□□ 1.21
NR1D2-201ENST00000312521 SRCIN1Q9C0H9 1055 aa22.61■■□□□ 1.21
NR1D2-201ENST00000312521 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.61■■□□□ 1.21
NR1D2-201ENST00000312521 CAGE1Q8TC20 777 aa22.61■■□□□ 1.21
NR1D2-201ENST00000312521 TSPY26PQ9H489 355 aa22.61■■□□□ 1.21
NR1D2-201ENST00000312521 TTC39AQ5SRH9 613 aa22.61■■□□□ 1.21
NR1D2-201ENST00000312521 CDK5RAP3Q96JB5 506 aa22.61■■□□□ 1.21
NR1D2-201ENST00000312521 FIBPO43427 364 aa22.61■■□□□ 1.21
NR1D2-201ENST00000312521 PIP4K2AP48426 406 aaPredicted RBP22.61■■□□□ 1.21
NR1D2-201ENST00000312521 WDR63Q8IWG1 891 aa22.61■■□□□ 1.21
NR1D2-201ENST00000312521 CYP46A1Q9Y6A2 500 aa22.61■■□□□ 1.21
NR1D2-201ENST00000312521 FMNL2Q96PY5 1086 aa22.6■■□□□ 1.21
NR1D2-201ENST00000312521 SMC2O95347 1197 aa22.6■■□□□ 1.21
NR1D2-201ENST00000312521 LRRCC1Q9C099 1032 aa22.6■■□□□ 1.21
NR1D2-201ENST00000312521 PRDM2Q13029 1718 aa22.6■■□□□ 1.21
NR1D2-201ENST00000312521 SMARCE1Q969G3 411 aa22.59■■□□□ 1.21
NR1D2-201ENST00000312521 ERCC4Q92889 916 aaPredicted RBP22.59■■□□□ 1.21
NR1D2-201ENST00000312521 CDK19Q9BWU1 502 aa22.59■■□□□ 1.21
NR1D2-201ENST00000312521 CABP1Q9NZU7 370 aa22.59■■□□□ 1.21
NR1D2-201ENST00000312521 ANKRD1Q15327 319 aa22.59■■□□□ 1.21
NR1D2-201ENST00000312521 SYNJ2O15056 1496 aa22.58■■□□□ 1.21
NR1D2-201ENST00000312521 BCAR3O75815 825 aa22.58■■□□□ 1.21
NR1D2-201ENST00000312521 THEMISQ8N1K5 641 aaPredicted RBP22.58■■□□□ 1.21
NR1D2-201ENST00000312521 HSP90AB2PQ58FF8 381 aa22.58■■□□□ 1.21
NR1D2-201ENST00000312521 MAGEC2Q9UBF1 373 aaPredicted RBP22.58■■□□□ 1.21
NR1D2-201ENST00000312521 ZNF530Q6P9A1 599 aaPredicted RBP22.58■■□□□ 1.2
NR1D2-201ENST00000312521 CCP110O43303 1012 aa22.58■■□□□ 1.2
NR1D2-201ENST00000312521 RDXP35241 583 aaKnown RBP22.58■■□□□ 1.2
NR1D2-201ENST00000312521 SLC52A1Q9NWF4 448 aa22.58■■□□□ 1.2
NR1D2-201ENST00000312521 NACAP1Q9BZK3 213 aa22.57■■□□□ 1.2
NR1D2-201ENST00000312521 STRN4Q9NRL3 753 aa22.57■■□□□ 1.2
NR1D2-201ENST00000312521 ATF7IPQ6VMQ6 1270 aa22.57■■□□□ 1.2
NR1D2-201ENST00000312521 CCAR1Q8IX12 1150 aaKnown RBP22.57■■□□□ 1.2
NR1D2-201ENST00000312521 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.57■■□□□ 1.28e-7■■■■■ 117
NR1D2-201ENST00000312521 CABP4P57796 275 aa22.56■■□□□ 1.2
NR1D2-201ENST00000312521 AEBP1Q8IUX7 1158 aa22.56■■□□□ 1.2
NR1D2-201ENST00000312521 TTLL5Q6EMB2 1281 aa22.56■■□□□ 1.2
NR1D2-201ENST00000312521 MTERF4Q7Z6M4 381 aaKnown RBP22.56■■□□□ 1.2
NR1D2-201ENST00000312521 TRIM22Q8IYM9 498 aa22.56■■□□□ 1.2
NR1D2-201ENST00000312521 MYO6Q9UM54 1294 aa22.55■■□□□ 1.2
NR1D2-201ENST00000312521 KIAA1107Q9UPP5 1409 aa22.54■■□□□ 1.2
NR1D2-201ENST00000312521 KRT18P05783 430 aaKnown RBP22.54■■□□□ 1.2
NR1D2-201ENST00000312521 CEBPZQ03701 1054 aaKnown RBP22.53■■□□□ 1.2
NR1D2-201ENST00000312521 SPG7Q9UQ90 795 aa22.53■■□□□ 1.2
NR1D2-201ENST00000312521 GRIN2BQ13224 1484 aa22.53■■□□□ 1.2
NR1D2-201ENST00000312521 WDR33Q9C0J8 1336 aaKnown RBP22.53■■□□□ 1.2
NR1D2-201ENST00000312521 MAP7D2Q96T17 732 aa22.53■■□□□ 1.2
NR1D2-201ENST00000312521 FBXO3Q9UK99 471 aa22.53■■□□□ 1.2
NR1D2-201ENST00000312521 DHX8Q14562 1220 aaKnown RBP22.52■■□□□ 1.2
NR1D2-201ENST00000312521 MVPQ14764 893 aaKnown RBP22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms