RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 KTN1Q86UP2 1357 aaKnown RBP12.65□□□□□ -0.38
PDE4D-201ENST00000309641 WASHC2AQ641Q2 1341 aa12.65□□□□□ -0.38
PDE4D-201ENST00000309641 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
PDE4D-201ENST00000309641 ALS2Q96Q42 1657 aa12.64□□□□□ -0.39
PDE4D-201ENST00000309641 NUTM2BA6NNL0 878 aaPredicted RBP12.64□□□□□ -0.39
PDE4D-201ENST00000309641 NUTM2EB1AL46 878 aaPredicted RBP12.64□□□□□ -0.39
PDE4D-201ENST00000309641 NUTM2AQ8IVF1 878 aaPredicted RBP12.64□□□□□ -0.39
PDE4D-201ENST00000309641 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.64□□□□□ -0.392e-6■■□□□ 12.3
PDE4D-201ENST00000309641 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
PDE4D-201ENST00000309641 TTC21BQ7Z4L5 1316 aa12.63□□□□□ -0.39
PDE4D-201ENST00000309641 LRP6O75581 1613 aa12.63□□□□□ -0.39
PDE4D-201ENST00000309641 MON2Q7Z3U7 1717 aa12.63□□□□□ -0.39
PDE4D-201ENST00000309641 HDGFL2Q7Z4V5 671 aaPredicted RBP12.63□□□□□ -0.39
PDE4D-201ENST00000309641 CARD14Q9BXL6 1004 aa12.63□□□□□ -0.39
PDE4D-201ENST00000309641 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
PDE4D-201ENST00000309641 ZRANB1Q9UGI0 708 aa12.63□□□□□ -0.39
PDE4D-201ENST00000309641 CCDC7Q96M83 1385 aa12.63□□□□□ -0.39
PDE4D-201ENST00000309641 NRKQ7Z2Y5 1582 aa12.63□□□□□ -0.39
PDE4D-201ENST00000309641 ABTB2Q8N961 1025 aa12.62□□□□□ -0.39
PDE4D-201ENST00000309641 ANKRD36BQ8N2N9 1353 aa12.62□□□□□ -0.39
PDE4D-201ENST00000309641 NINLQ9Y2I6 1382 aa12.62□□□□□ -0.39
PDE4D-201ENST00000309641 NME9Q86XW9 330 aa12.61□□□□□ -0.39
PDE4D-201ENST00000309641 PANK3Q9H999 370 aa12.61□□□□□ -0.39
PDE4D-201ENST00000309641 ARHGEF10O15013 1369 aa12.61□□□□□ -0.39
PDE4D-201ENST00000309641 PIK3C2AO00443 1686 aa12.6□□□□□ -0.39
PDE4D-201ENST00000309641 COL22A1Q8NFW1 1626 aaPredicted RBP12.6□□□□□ -0.39
PDE4D-201ENST00000309641 SPATA31A6Q5VVP1 1343 aa12.6□□□□□ -0.39
PDE4D-201ENST00000309641 MED1Q15648 1581 aaPredicted RBP12.6□□□□□ -0.39
PDE4D-201ENST00000309641 ADAMTS2O95450 1211 aa12.6□□□□□ -0.39
PDE4D-201ENST00000309641 EDC4Q6P2E9 1401 aaKnown RBP12.6□□□□□ -0.39
PDE4D-201ENST00000309641 NLRP6P59044 892 aa12.59□□□□□ -0.39
PDE4D-201ENST00000309641 NSD3Q9BZ95 1437 aa12.58□□□□□ -0.4
PDE4D-201ENST00000309641 BRD4O60885 1362 aaPredicted RBP12.58□□□□□ -0.4
PDE4D-201ENST00000309641 ABCA3Q99758 1704 aa12.57□□□□□ -0.4
PDE4D-201ENST00000309641 MARF1Q9Y4F3 1742 aaKnown RBP12.57□□□□□ -0.4
PDE4D-201ENST00000309641 CRYBG1Q9Y4K1 1723 aa12.57□□□□□ -0.4
PDE4D-201ENST00000309641 TTC21AQ8NDW8 1320 aa12.57□□□□□ -0.4
PDE4D-201ENST00000309641 FYB1O15117 783 aa12.56□□□□□ -0.4
PDE4D-201ENST00000309641 SOX12O15370 315 aa12.56□□□□□ -0.4
PDE4D-201ENST00000309641 NLRP13Q86W25 1043 aa12.56□□□□□ -0.4
PDE4D-201ENST00000309641 GGNBP2Q9H3C7 697 aa12.56□□□□□ -0.4
PDE4D-201ENST00000309641 USP19O94966 1318 aa12.56□□□□□ -0.4
PDE4D-201ENST00000309641 FBLN1P23142 703 aa12.55□□□□□ -0.4
PDE4D-201ENST00000309641 HAP1P54257 671 aaPredicted RBP12.55□□□□□ -0.4
PDE4D-201ENST00000309641 ZC3H6P61129 1189 aaKnown RBP12.55□□□□□ -0.4
PDE4D-201ENST00000309641 C8orf37Q96NL8 207 aa12.55□□□□□ -0.4
PDE4D-201ENST00000309641 PHRF1Q9P1Y6 1649 aaKnown RBP12.55□□□□□ -0.4
PDE4D-201ENST00000309641 GCP02774 474 aa12.54□□□□□ -0.4
PDE4D-201ENST00000309641 MEX3CQ5U5Q3 659 aaKnown RBP12.54□□□□□ -0.4
PDE4D-201ENST00000309641 PER1O15534 1290 aaPredicted RBP12.54□□□□□ -0.4
PDE4D-201ENST00000309641 USP31Q70CQ4 1352 aa12.54□□□□□ -0.4
PDE4D-201ENST00000309641 OVOS2A0A0J9YW53 1432 aa12.53□□□□□ -0.4
PDE4D-201ENST00000309641 OVOS2Q6IE36 1432 aa12.53□□□□□ -0.4
PDE4D-201ENST00000309641 FAM83GA6ND36 823 aa12.53□□□□□ -0.4
PDE4D-201ENST00000309641 RGS17Q9UGC6 210 aaPredicted RBP12.53□□□□□ -0.4
PDE4D-201ENST00000309641 SLIT3O75094 1523 aa12.52□□□□□ -0.4
PDE4D-201ENST00000309641 CHRNA2Q15822 529 aa12.52□□□□□ -0.4
PDE4D-201ENST00000309641 KIAA0232Q92628 1395 aa12.52□□□□□ -0.4
PDE4D-201ENST00000309641 NGLY1Q96IV0 654 aa12.51□□□□□ -0.41
PDE4D-201ENST00000309641 CGNL1Q0VF96 1302 aa12.51□□□□□ -0.41
PDE4D-201ENST00000309641 ZBTB7CA1YPR0 619 aa12.5□□□□□ -0.41
PDE4D-201ENST00000309641 DDX10Q13206 875 aaKnown RBP12.5□□□□□ -0.41
PDE4D-201ENST00000309641 CNGB1Q14028 1251 aaPredicted RBP12.5□□□□□ -0.41
PDE4D-201ENST00000309641 COG3Q96JB2 828 aa12.5□□□□□ -0.41
PDE4D-201ENST00000309641 NFAT5O94916 1531 aa12.5□□□□□ -0.41
PDE4D-201ENST00000309641 KIF20BQ96Q89 1820 aa12.5□□□□□ -0.41
PDE4D-201ENST00000309641 USP54Q70EL1 1684 aa12.5□□□□□ -0.41
PDE4D-201ENST00000309641 AFF2P51816 1311 aa12.5□□□□□ -0.41
PDE4D-201ENST00000309641 AMER1Q5JTC6 1135 aaPredicted RBP12.5□□□□□ -0.41
PDE4D-201ENST00000309641 PRDM11Q9NQV5 511 aa12.5□□□□□ -0.41
PDE4D-201ENST00000309641 KNSTRNQ9Y448 316 aa12.5□□□□□ -0.41
PDE4D-201ENST00000309641 ZNF316A6NFI3 1004 aaPredicted RBP12.49□□□□□ -0.41
PDE4D-201ENST00000309641 FNBP4Q8N3X1 1017 aaPredicted RBP12.49□□□□□ -0.41
PDE4D-201ENST00000309641 TNNT2P45379 298 aaPredicted RBP12.48□□□□□ -0.41
PDE4D-201ENST00000309641 ARHGEF25Q86VW2 580 aa12.48□□□□□ -0.41
PDE4D-201ENST00000309641 PHF23Q9BUL5 403 aaPredicted RBP12.48□□□□□ -0.41
PDE4D-201ENST00000309641 CPDO75976 1380 aa12.48□□□□□ -0.41
PDE4D-201ENST00000309641 SLIT2O94813 1529 aa12.48□□□□□ -0.41
PDE4D-201ENST00000309641 BCL9LQ86UU0 1499 aa12.47□□□□□ -0.41
PDE4D-201ENST00000309641 RRS1Q15050 365 aaKnown RBP12.47□□□□□ -0.41
PDE4D-201ENST00000309641 CC2D1BQ5T0F9 858 aaKnown RBP12.47□□□□□ -0.41
PDE4D-201ENST00000309641 KCNH5Q8NCM2 988 aa12.47□□□□□ -0.41
PDE4D-201ENST00000309641 BTG4Q9NY30 223 aa12.47□□□□□ -0.41
PDE4D-201ENST00000309641 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
PDE4D-201ENST00000309641 POTEAQ6S8J7 498 aa12.47□□□□□ -0.41
PDE4D-201ENST00000309641 USP21Q9UK80 565 aa12.47□□□□□ -0.41
PDE4D-201ENST00000309641 PLCH1Q4KWH8 1693 aa12.47□□□□□ -0.41
PDE4D-201ENST00000309641 CAMTA1Q9Y6Y1 1673 aa12.46□□□□□ -0.41
PDE4D-201ENST00000309641 MAP3K19Q56UN5 1328 aa12.46□□□□□ -0.42
PDE4D-201ENST00000309641 COL14A1Q05707 1796 aaKnown RBP12.45□□□□□ -0.42
PDE4D-201ENST00000309641 LMO7Q8WWI1 1683 aa12.45□□□□□ -0.42
PDE4D-201ENST00000309641 COL18A1P39060 1754 aa12.45□□□□□ -0.42
PDE4D-201ENST00000309641 LTN1O94822 1766 aa12.44□□□□□ -0.42
PDE4D-201ENST00000309641 EMILIN1Q9Y6C2 1016 aa12.44□□□□□ -0.42
PDE4D-201ENST00000309641 ANKRD26Q9UPS8 1709 aa12.44□□□□□ -0.42
PDE4D-201ENST00000309641 AATKQ6ZMQ8 1374 aa12.44□□□□□ -0.42
PDE4D-201ENST00000309641 UNC5CLQ8IV45 518 aa12.44□□□□□ -0.42
PDE4D-201ENST00000309641 STRN4Q9NRL3 753 aa12.44□□□□□ -0.42
PDE4D-201ENST00000309641 RGPD5Q99666 1765 aa12.43□□□□□ -0.42
PDE4D-201ENST00000309641 MORC1Q86VD1 984 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms