RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 SSH2Q76I76 1423 aa17.83■□□□□ 0.45
APTX-201ENST00000309615 TNS3Q68CZ2 1445 aa17.83■□□□□ 0.44
APTX-201ENST00000309615 LMOD2Q6P5Q4 547 aa17.82■□□□□ 0.44
APTX-201ENST00000309615 MON2Q7Z3U7 1717 aa17.82■□□□□ 0.44
APTX-201ENST00000309615 TTC21BQ7Z4L5 1316 aa17.81■□□□□ 0.44
APTX-201ENST00000309615 CARD14Q9BXL6 1004 aa17.81■□□□□ 0.44
APTX-201ENST00000309615 PANK3Q9H999 370 aa17.81■□□□□ 0.44
APTX-201ENST00000309615 NRKQ7Z2Y5 1582 aa17.8■□□□□ 0.44
APTX-201ENST00000309615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.8■□□□□ 0.442e-6■■■□□ 17.9
APTX-201ENST00000309615 BRD4O60885 1362 aaPredicted RBP17.8■□□□□ 0.44
APTX-201ENST00000309615 JCADQ9P266 1359 aa17.8■□□□□ 0.44
APTX-201ENST00000309615 EDC4Q6P2E9 1401 aaKnown RBP17.8■□□□□ 0.44
APTX-201ENST00000309615 PNPLA6Q8IY17 1366 aa17.79■□□□□ 0.44
APTX-201ENST00000309615 ALS2Q96Q42 1657 aa17.79■□□□□ 0.44
APTX-201ENST00000309615 NUTM2GQ5VZR2 741 aa17.79■□□□□ 0.44
APTX-201ENST00000309615 ABTB2Q8N961 1025 aa17.78■□□□□ 0.44
APTX-201ENST00000309615 ARHGEF10O15013 1369 aa17.78■□□□□ 0.44
APTX-201ENST00000309615 ZNF316A6NFI3 1004 aaPredicted RBP17.78■□□□□ 0.44
APTX-201ENST00000309615 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.44
APTX-201ENST00000309615 TTC21AQ8NDW8 1320 aa17.77■□□□□ 0.44
APTX-201ENST00000309615 PLEKHG5O94827 1062 aa17.77■□□□□ 0.43
APTX-201ENST00000309615 NME9Q86XW9 330 aa17.76■□□□□ 0.43
APTX-201ENST00000309615 SHPRHQ149N8 1683 aa17.76■□□□□ 0.43
APTX-201ENST00000309615 PIK3C2AO00443 1686 aa17.75■□□□□ 0.43
APTX-201ENST00000309615 CABLES1Q8TDN4 633 aa17.75■□□□□ 0.43
APTX-201ENST00000309615 ZRANB1Q9UGI0 708 aa17.75■□□□□ 0.43
APTX-201ENST00000309615 COL22A1Q8NFW1 1626 aaPredicted RBP17.73■□□□□ 0.43
APTX-201ENST00000309615 NLRP6P59044 892 aa17.73■□□□□ 0.43
APTX-201ENST00000309615 NUTM2BA6NNL0 878 aaPredicted RBP17.72■□□□□ 0.43
APTX-201ENST00000309615 NUTM2EB1AL46 878 aaPredicted RBP17.72■□□□□ 0.43
APTX-201ENST00000309615 FYB1O15117 783 aa17.72■□□□□ 0.43
APTX-201ENST00000309615 NUTM2AQ8IVF1 878 aaPredicted RBP17.72■□□□□ 0.43
APTX-201ENST00000309615 PER1O15534 1290 aaPredicted RBP17.71■□□□□ 0.43
APTX-201ENST00000309615 DDX10Q13206 875 aaKnown RBP17.71■□□□□ 0.43
APTX-201ENST00000309615 NLRP13Q86W25 1043 aa17.71■□□□□ 0.43
APTX-201ENST00000309615 SPATA31A6Q5VVP1 1343 aa17.71■□□□□ 0.43
APTX-201ENST00000309615 MED1Q15648 1581 aaPredicted RBP17.71■□□□□ 0.43
APTX-201ENST00000309615 KNSTRNQ9Y448 316 aa17.71■□□□□ 0.43
APTX-201ENST00000309615 CGNL1Q0VF96 1302 aa17.71■□□□□ 0.43
APTX-201ENST00000309615 GGNBP2Q9H3C7 697 aa17.7■□□□□ 0.42
APTX-201ENST00000309615 USP19O94966 1318 aa17.69■□□□□ 0.42
APTX-201ENST00000309615 USP31Q70CQ4 1352 aa17.69■□□□□ 0.42
APTX-201ENST00000309615 LRP6O75581 1613 aa17.69■□□□□ 0.42
APTX-201ENST00000309615 MARF1Q9Y4F3 1742 aaKnown RBP17.68■□□□□ 0.42
APTX-201ENST00000309615 OVOS2A0A0J9YW53 1432 aa17.68■□□□□ 0.42
APTX-201ENST00000309615 OVOS2Q6IE36 1432 aa17.68■□□□□ 0.42
APTX-201ENST00000309615 HAP1P54257 671 aaPredicted RBP17.68■□□□□ 0.42
APTX-201ENST00000309615 CRYBG1Q9Y4K1 1723 aa17.68■□□□□ 0.42
APTX-201ENST00000309615 ABCA3Q99758 1704 aa17.67■□□□□ 0.42
APTX-201ENST00000309615 ADAMTS2O95450 1211 aa17.67■□□□□ 0.42
APTX-201ENST00000309615 GCP02774 474 aa17.67■□□□□ 0.42
APTX-201ENST00000309615 AMER1Q5JTC6 1135 aaPredicted RBP17.67■□□□□ 0.42
APTX-201ENST00000309615 COG3Q96JB2 828 aa17.67■□□□□ 0.42
APTX-201ENST00000309615 KIF20BQ96Q89 1820 aa17.66■□□□□ 0.42
APTX-201ENST00000309615 SOX12O15370 315 aa17.66■□□□□ 0.42
APTX-201ENST00000309615 USP54Q70EL1 1684 aa17.66■□□□□ 0.42
APTX-201ENST00000309615 PHRF1Q9P1Y6 1649 aaKnown RBP17.65■□□□□ 0.42
APTX-201ENST00000309615 SLIT3O75094 1523 aa17.65■□□□□ 0.42
APTX-201ENST00000309615 ZC3H6P61129 1189 aaKnown RBP17.63■□□□□ 0.41
APTX-201ENST00000309615 CC2D1BQ5T0F9 858 aaKnown RBP17.63■□□□□ 0.41
APTX-201ENST00000309615 CNGB1Q14028 1251 aaPredicted RBP17.63■□□□□ 0.41
APTX-201ENST00000309615 KCNH5Q8NCM2 988 aa17.63■□□□□ 0.41
APTX-201ENST00000309615 NSD2O96028 1365 aa17.62■□□□□ 0.41
APTX-201ENST00000309615 FBLN1P23142 703 aa17.62■□□□□ 0.41
APTX-201ENST00000309615 NFAT5O94916 1531 aa17.61■□□□□ 0.41
APTX-201ENST00000309615 MEX3CQ5U5Q3 659 aaKnown RBP17.61■□□□□ 0.41
APTX-201ENST00000309615 KIAA0232Q92628 1395 aa17.61■□□□□ 0.41
APTX-201ENST00000309615 NPC1L1Q9UHC9 1359 aa17.6■□□□□ 0.41
APTX-201ENST00000309615 C8orf37Q96NL8 207 aa17.6■□□□□ 0.41
APTX-201ENST00000309615 FAM83GA6ND36 823 aa17.59■□□□□ 0.41
APTX-201ENST00000309615 TNNT2P45379 298 aaPredicted RBP17.59■□□□□ 0.41
APTX-201ENST00000309615 PRDM11Q9NQV5 511 aa17.59■□□□□ 0.41
APTX-201ENST00000309615 ANKRD26Q9UPS8 1709 aa17.59■□□□□ 0.41
APTX-201ENST00000309615 CPDO75976 1380 aa17.59■□□□□ 0.41
APTX-201ENST00000309615 ZBTB7CA1YPR0 619 aa17.58■□□□□ 0.41
APTX-201ENST00000309615 CHRNA2Q15822 529 aa17.58■□□□□ 0.41
APTX-201ENST00000309615 MORC1Q86VD1 984 aa17.58■□□□□ 0.41
APTX-201ENST00000309615 ARHGEF25Q86VW2 580 aa17.58■□□□□ 0.4
APTX-201ENST00000309615 RRS1Q15050 365 aaKnown RBP17.57■□□□□ 0.4
APTX-201ENST00000309615 NGLY1Q96IV0 654 aa17.57■□□□□ 0.4
APTX-201ENST00000309615 MAP3K19Q56UN5 1328 aa17.55■□□□□ 0.4
APTX-201ENST00000309615 FNBP4Q8N3X1 1017 aaPredicted RBP17.54■□□□□ 0.4
APTX-201ENST00000309615 AFF2P51816 1311 aa17.54■□□□□ 0.4
APTX-201ENST00000309615 AATKQ6ZMQ8 1374 aa17.54■□□□□ 0.4
APTX-201ENST00000309615 COL14A1Q05707 1796 aaKnown RBP17.53■□□□□ 0.4
APTX-201ENST00000309615 BTG4Q9NY30 223 aa17.53■□□□□ 0.4
APTX-201ENST00000309615 AXIN2Q9Y2T1 843 aa17.53■□□□□ 0.4
APTX-201ENST00000309615 EMILIN1Q9Y6C2 1016 aa17.53■□□□□ 0.4
APTX-201ENST00000309615 SLIT2O94813 1529 aa17.53■□□□□ 0.4
APTX-201ENST00000309615 LTN1O94822 1766 aa17.53■□□□□ 0.4
APTX-201ENST00000309615 POLKQ9UBT6 870 aa17.52■□□□□ 0.39
APTX-201ENST00000309615 PLCH1Q4KWH8 1693 aa17.51■□□□□ 0.39
APTX-201ENST00000309615 LMO7Q8WWI1 1683 aa17.51■□□□□ 0.39
APTX-201ENST00000309615 CAMTA1Q9Y6Y1 1673 aa17.51■□□□□ 0.39
APTX-201ENST00000309615 BCL9LQ86UU0 1499 aa17.51■□□□□ 0.39
APTX-201ENST00000309615 COL18A1P39060 1754 aa17.51■□□□□ 0.39
APTX-201ENST00000309615 PPM1GO15355 546 aaPredicted RBP17.5■□□□□ 0.39
APTX-201ENST00000309615 AMPHP49418 695 aa17.5■□□□□ 0.39
APTX-201ENST00000309615 USP21Q9UK80 565 aa17.5■□□□□ 0.39
APTX-201ENST00000309615 IP6K1Q92551 441 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms