RNA–Protein interactions for RNA: ENST00000309415.7

SH3RF3-201, Transcript of SH3 domain containing ring finger 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SH3RF3, Length 5,803 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3-201ENST00000309415 PLEKHH2Q8IVE3 1493 aa24.94■■□□□ 1.58
SH3RF3-201ENST00000309415 MRC2Q9UBG0 1479 aa24.94■■□□□ 1.58
SH3RF3-201ENST00000309415 RRP12Q5JTH9 1297 aaKnown RBP24.93■■□□□ 1.58
SH3RF3-201ENST00000309415 HIP1O00291 1037 aa24.93■■□□□ 1.58
SH3RF3-201ENST00000309415 TCP11L2Q8N4U5 519 aa24.93■■□□□ 1.58
SH3RF3-201ENST00000309415 LRRC9Q6ZRR7 1453 aa24.93■■□□□ 1.58
SH3RF3-201ENST00000309415 SCAPERQ9BY12 1400 aa24.93■■□□□ 1.58
SH3RF3-201ENST00000309415 HOMER1Q86YM7 354 aa24.92■■□□□ 1.58
SH3RF3-201ENST00000309415 TSHZ2Q9NRE2 1034 aa24.92■■□□□ 1.58
SH3RF3-201ENST00000309415 NUCB2P80303 420 aa24.92■■□□□ 1.58
SH3RF3-201ENST00000309415 SLC52A1Q9NWF4 448 aa24.92■■□□□ 1.58
SH3RF3-201ENST00000309415 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.92■■□□□ 1.58
SH3RF3-201ENST00000309415 ATP2B2Q01814 1243 aa24.92■■□□□ 1.58
SH3RF3-201ENST00000309415 OLFM4Q6UX06 510 aa24.92■■□□□ 1.58
SH3RF3-201ENST00000309415 TWISTNBQ3B726 338 aaPredicted RBP24.92■■□□□ 1.58
SH3RF3-201ENST00000309415 HDGFL1Q5TGJ6 251 aa24.91■■□□□ 1.58
SH3RF3-201ENST00000309415 NCAPD3P42695 1498 aa24.91■■□□□ 1.58
SH3RF3-201ENST00000309415 CABP1Q9NZU7 370 aa24.91■■□□□ 1.58
SH3RF3-201ENST00000309415 RBM5P52756 815 aaKnown RBP eCLIP24.9■■□□□ 1.58
SH3RF3-201ENST00000309415 CDK5RAP3Q96JB5 506 aa24.9■■□□□ 1.58
SH3RF3-201ENST00000309415 CHMP5Q9NZZ3 219 aa24.9■■□□□ 1.58
SH3RF3-201ENST00000309415 SULT6B1Q6IMI4 303 aa24.9■■□□□ 1.58
SH3RF3-201ENST00000309415 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.9■■□□□ 1.58
SH3RF3-201ENST00000309415 OFD1O75665 1012 aa24.9■■□□□ 1.58
SH3RF3-201ENST00000309415 RTEL1-TNFRSF6BF6WH68 1400 aa24.89■■□□□ 1.58
SH3RF3-201ENST00000309415 SLC26A8Q96RN1 970 aa24.89■■□□□ 1.58
SH3RF3-201ENST00000309415 ADAMTS8Q9UP79 889 aa24.89■■□□□ 1.58
SH3RF3-201ENST00000309415 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
SH3RF3-201ENST00000309415 ZFYVE27Q5T4F4 411 aa24.89■■□□□ 1.57
SH3RF3-201ENST00000309415 GNAI2P04899 355 aa24.88■■□□□ 1.57
SH3RF3-201ENST00000309415 MPHOSPH8Q99549 860 aa24.88■■□□□ 1.57
SH3RF3-201ENST00000309415 C22orf23Q9BZE7 217 aa24.87■■□□□ 1.57
SH3RF3-201ENST00000309415 HMGB2P26583 209 aaKnown RBP24.87■■□□□ 1.57
SH3RF3-201ENST00000309415 HFM1A2PYH4 1435 aa24.86■■□□□ 1.57
SH3RF3-201ENST00000309415 MYL6BP14649 208 aa24.86■■□□□ 1.57
SH3RF3-201ENST00000309415 PPP2R1AP30153 589 aa24.86■■□□□ 1.57
SH3RF3-201ENST00000309415 RAPGEF3O95398 923 aa24.85■■□□□ 1.57
SH3RF3-201ENST00000309415 SLC4A2P04920 1241 aa24.85■■□□□ 1.57
SH3RF3-201ENST00000309415 EXOSC9Q06265 439 aaKnown RBP24.85■■□□□ 1.57
SH3RF3-201ENST00000309415 NACAP1Q9BZK3 213 aa24.85■■□□□ 1.57
SH3RF3-201ENST00000309415 NAT10Q9H0A0 1025 aaKnown RBP24.85■■□□□ 1.57
SH3RF3-201ENST00000309415 BRD4O60885 1362 aaPredicted RBP24.84■■□□□ 1.57
SH3RF3-201ENST00000309415 ATP2B1P20020 1258 aa24.84■■□□□ 1.57
SH3RF3-201ENST00000309415 C9orf84Q5VXU9 1444 aa24.83■■□□□ 1.57
SH3RF3-201ENST00000309415 KRT18P05783 430 aaKnown RBP24.83■■□□□ 1.57
SH3RF3-201ENST00000309415 TXLNAP40222 546 aa24.83■■□□□ 1.57
SH3RF3-201ENST00000309415 CCDC57Q2TAC2 916 aa24.83■■□□□ 1.57
SH3RF3-201ENST00000309415 SETQ01105 290 aaPredicted RBP24.82■■□□□ 1.56
SH3RF3-201ENST00000309415 SDF4Q9BRK5 362 aa24.82■■□□□ 1.56
SH3RF3-201ENST00000309415 XPCQ01831 940 aaPredicted RBP24.82■■□□□ 1.56
SH3RF3-201ENST00000309415 SLC12A5Q9H2X9 1139 aa24.81■■□□□ 1.56
SH3RF3-201ENST00000309415 HSP90AB2PQ58FF8 381 aa24.81■■□□□ 1.56
SH3RF3-201ENST00000309415 SIL1Q9H173 461 aa24.81■■□□□ 1.56
SH3RF3-201ENST00000309415 CCT4P50991 539 aaKnown RBP24.8■■□□□ 1.56
SH3RF3-201ENST00000309415 PAF1Q8N7H5 531 aa24.8■■□□□ 1.56
SH3RF3-201ENST00000309415 SRCIN1Q9C0H9 1055 aa24.8■■□□□ 1.56
SH3RF3-201ENST00000309415 KIF21BO75037 1637 aa24.79■■□□□ 1.56
SH3RF3-201ENST00000309415 BICDL1Q6ZP65 573 aa24.79■■□□□ 1.56
SH3RF3-201ENST00000309415 ZSCAN25Q6NSZ9 544 aa24.78■■□□□ 1.56
SH3RF3-201ENST00000309415 STK11IPQ8N1F8 1099 aa24.78■■□□□ 1.56
SH3RF3-201ENST00000309415 RPGRIP1LQ68CZ1 1315 aa24.78■■□□□ 1.56
SH3RF3-201ENST00000309415 BTBD11A6QL63 1104 aa24.78■■□□□ 1.56
SH3RF3-201ENST00000309415 ZSCAN29Q8IWY8 852 aaPredicted RBP24.78■■□□□ 1.56
SH3RF3-201ENST00000309415 PDILTQ8N807 584 aa24.78■■□□□ 1.56
SH3RF3-201ENST00000309415 ZNF428Q96B54 188 aa24.77■■□□□ 1.56
SH3RF3-201ENST00000309415 C1orf115Q9H7X2 142 aa24.77■■□□□ 1.56
SH3RF3-201ENST00000309415 CCDC173Q0VFZ6 552 aa24.76■■□□□ 1.55
SH3RF3-201ENST00000309415 NOB1Q9ULX3 412 aaKnown RBP24.76■■□□□ 1.55
SH3RF3-201ENST00000309415 ERBINQ96RT1 1412 aa24.76■■□□□ 1.55
SH3RF3-201ENST00000309415 PATL2C9JE40 543 aaKnown RBP24.76■■□□□ 1.55
SH3RF3-201ENST00000309415 RDXP35241 583 aaKnown RBP24.76■■□□□ 1.55
SH3RF3-201ENST00000309415 NBPF1Q3BBV0 1214 aa24.76■■□□□ 1.55
SH3RF3-201ENST00000309415 RUFY1Q96T51 708 aa24.76■■□□□ 1.55
SH3RF3-201ENST00000309415 ZC3H6P61129 1189 aaKnown RBP24.75■■□□□ 1.55
SH3RF3-201ENST00000309415 GSE1Q14687 1217 aa24.75■■□□□ 1.55
SH3RF3-201ENST00000309415 MAGEC2Q9UBF1 373 aaPredicted RBP24.75■■□□□ 1.55
SH3RF3-201ENST00000309415 CDR1P51861 262 aa24.75■■□□□ 1.55
SH3RF3-201ENST00000309415 CCDC69A6NI79 296 aa24.74■■□□□ 1.55
SH3RF3-201ENST00000309415 GCC1Q96CN9 775 aa24.74■■□□□ 1.55
SH3RF3-201ENST00000309415 CFTRP13569 1480 aa24.74■■□□□ 1.55
SH3RF3-201ENST00000309415 SNAPC4Q5SXM2 1469 aa24.74■■□□□ 1.55
SH3RF3-201ENST00000309415 SOGA3Q5TF21 947 aa24.74■■□□□ 1.55
SH3RF3-201ENST00000309415 SYCP1Q15431 976 aa24.73■■□□□ 1.55
SH3RF3-201ENST00000309415 TSR2Q969E8 191 aaKnown RBP24.73■■□□□ 1.55
SH3RF3-201ENST00000309415 ZNF396Q96N95 335 aaPredicted RBP24.73■■□□□ 1.55
SH3RF3-201ENST00000309415 TRIM22Q8IYM9 498 aa24.73■■□□□ 1.55
SH3RF3-201ENST00000309415 STARD3NLO95772 234 aa24.72■■□□□ 1.55
SH3RF3-201ENST00000309415 IGHMBP2P38935 993 aaKnown RBP24.72■■□□□ 1.55
SH3RF3-201ENST00000309415 PDCP20941 246 aa24.72■■□□□ 1.55
SH3RF3-201ENST00000309415 LRRCC1Q9C099 1032 aa24.72■■□□□ 1.55
SH3RF3-201ENST00000309415 KCNH5Q8NCM2 988 aa24.72■■□□□ 1.55
SH3RF3-201ENST00000309415 RRS1Q15050 365 aaKnown RBP24.71■■□□□ 1.55
SH3RF3-201ENST00000309415 FKBP4Q02790 459 aaKnown RBP eCLIP24.71■■□□□ 1.55
SH3RF3-201ENST00000309415 ATAD2Q6PL18 1390 aa24.7■■□□□ 1.55
SH3RF3-201ENST00000309415 NESP48681 1621 aa24.7■■□□□ 1.55
SH3RF3-201ENST00000309415 IFT57Q9NWB7 429 aa24.7■■□□□ 1.55
SH3RF3-201ENST00000309415 KINO60870 393 aaKnown RBP24.7■■□□□ 1.54
SH3RF3-201ENST00000309415 AK7Q96M32 723 aa24.7■■□□□ 1.54
SH3RF3-201ENST00000309415 RAI14Q9P0K7 980 aa24.7■■□□□ 1.54
SH3RF3-201ENST00000309415 NEK4P51957 841 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms