RNA–Protein interactions for RNA: ENST00000303391.10

MECP2-201, Transcript of methyl-CpG binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MECP2, Length 10,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-201ENST00000303391 CFAP45Q9UL16 551 aa12.94□□□□□ -0.34
MECP2-201ENST00000303391 SMTNL1A8MU46 457 aa12.94□□□□□ -0.34
MECP2-201ENST00000303391 SPATA24Q86W54 205 aa12.93□□□□□ -0.34
MECP2-201ENST00000303391 GBP2P32456 591 aaPredicted RBP12.93□□□□□ -0.34
MECP2-201ENST00000303391 TUBB4BP68371 445 aa12.93□□□□□ -0.34
MECP2-201ENST00000303391 KANK4Q5T7N3 995 aaPredicted RBP12.93□□□□□ -0.34
MECP2-201ENST00000303391 GTPBP4Q9BZE4 634 aaKnown RBP12.93□□□□□ -0.34
MECP2-201ENST00000303391 G3BP1Q13283 466 aaKnown RBP eCLIP12.93□□□□□ -0.34
MECP2-201ENST00000303391 CCDC181Q5TID7 509 aa12.93□□□□□ -0.34
MECP2-201ENST00000303391 CCDC148Q8NFR7 591 aa12.93□□□□□ -0.34
MECP2-201ENST00000303391 SART3Q15020 963 aaKnown RBP12.92□□□□□ -0.34
MECP2-201ENST00000303391 GOLGA6L9A6NEM1 432 aa12.92□□□□□ -0.34
MECP2-201ENST00000303391 NBPF1Q3BBV0 1214 aa12.92□□□□□ -0.34
MECP2-201ENST00000303391 NFXL1Q6ZNB6 911 aa12.92□□□□□ -0.34
MECP2-201ENST00000303391 PLCD4Q9BRC7 762 aa12.92□□□□□ -0.34
MECP2-201ENST00000303391 PRPF40AO75400 957 aaKnown RBP12.92□□□□□ -0.34
MECP2-201ENST00000303391 DHX29Q7Z478 1369 aaKnown RBP12.91□□□□□ -0.34
MECP2-201ENST00000303391 SRCIN1Q9C0H9 1055 aa12.91□□□□□ -0.34
MECP2-201ENST00000303391 ST20-MTHFSA0A0A6YYL1 179 aa12.91□□□□□ -0.34
MECP2-201ENST00000303391 CCDC91Q7Z6B0 441 aa12.91□□□□□ -0.34
MECP2-201ENST00000303391 ENOX2Q16206 610 aaKnown RBP12.91□□□□□ -0.34
MECP2-201ENST00000303391 CCDC83Q8IWF9 413 aa12.91□□□□□ -0.34
MECP2-201ENST00000303391 KIF3BO15066 747 aa12.91□□□□□ -0.34
MECP2-201ENST00000303391 IMMTQ16891 758 aaKnown RBP12.91□□□□□ -0.34
MECP2-201ENST00000303391 ERC1Q8IUD2 1116 aa12.9□□□□□ -0.34
MECP2-201ENST00000303391 CLASRPQ8N2M8 674 aaKnown RBP12.9□□□□□ -0.34
MECP2-201ENST00000303391 PAXBP1Q9Y5B6 917 aa12.9□□□□□ -0.34
MECP2-201ENST00000303391 SERPINC1P01008 464 aa12.9□□□□□ -0.34
MECP2-201ENST00000303391 TUBB4AP04350 444 aa12.9□□□□□ -0.34
MECP2-201ENST00000303391 CCDC43Q96MW1 224 aaKnown RBP12.9□□□□□ -0.34
MECP2-201ENST00000303391 PTPN14Q15678 1187 aa12.89□□□□□ -0.35
MECP2-201ENST00000303391 ERICH3Q5RHP9 1530 aa12.89□□□□□ -0.35
MECP2-201ENST00000303391 CCDC102AQ96A19 550 aa12.89□□□□□ -0.35
MECP2-201ENST00000303391 MYOM3Q5VTT5 1437 aa12.89□□□□□ -0.35
MECP2-201ENST00000303391 GSDMDP57764 484 aa12.89□□□□□ -0.35
MECP2-201ENST00000303391 FOXD1Q16676 465 aa12.88□□□□□ -0.35
MECP2-201ENST00000303391 ERICH4A6NGS2 130 aa12.88□□□□□ -0.35
MECP2-201ENST00000303391 NF2P35240 595 aa12.88□□□□□ -0.35
MECP2-201ENST00000303391 ZSCAN31Q96LW9 406 aaPredicted RBP12.88□□□□□ -0.35
MECP2-201ENST00000303391 RRBP1Q9P2E9 1410 aaKnown RBP12.88□□□□□ -0.35
MECP2-201ENST00000303391 KIAA1328Q86T90 577 aa12.88□□□□□ -0.35
MECP2-201ENST00000303391 ERCC6Q03468 1493 aa12.88□□□□□ -0.35
MECP2-201ENST00000303391 AMPHP49418 695 aa12.88□□□□□ -0.35
MECP2-201ENST00000303391 CCDC183Q5T5S1 534 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 EFCAB2Q5VUJ9 269 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 SPC24Q8NBT2 197 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 PLEKHG5O94827 1062 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 SFPQP23246 707 aaKnown RBP eCLIP12.87□□□□□ -0.35
MECP2-201ENST00000303391 GNAI3P08754 354 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 HS1BP3Q53T59 392 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 COG3Q96JB2 828 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 LNPKQ9C0E8 428 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 CTAGE5O15320 804 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 IRX3P78415 501 aaPredicted RBP12.87□□□□□ -0.35
MECP2-201ENST00000303391 SYCP1Q15431 976 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 MAP3K11Q16584 847 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 STK38Q15208 465 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 FYCO1Q9BQS8 1478 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 CDKL5O76039 1030 aa12.87□□□□□ -0.35
MECP2-201ENST00000303391 FEZ1Q99689 392 aa12.86□□□□□ -0.35
MECP2-201ENST00000303391 NUP62CLQ9H1M0 184 aa12.86□□□□□ -0.35
MECP2-201ENST00000303391 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.86□□□□□ -0.35
MECP2-201ENST00000303391 NEK4P51957 841 aa12.86□□□□□ -0.35
MECP2-201ENST00000303391 C1orf141Q5JVX7 400 aa12.86□□□□□ -0.35
MECP2-201ENST00000303391 JAKMIP3Q5VZ66 844 aa12.86□□□□□ -0.35
MECP2-201ENST00000303391 GIGYF2Q6Y7W6 1299 aaKnown RBP12.86□□□□□ -0.35
MECP2-201ENST00000303391 KRT222Q8N1A0 295 aa12.86□□□□□ -0.35
MECP2-201ENST00000303391 ZNF428Q96B54 188 aa12.86□□□□□ -0.35
MECP2-201ENST00000303391 APAF1O14727 1248 aa12.86□□□□□ -0.35
MECP2-201ENST00000303391 SMARCA4P51532 1647 aa12.86□□□□□ -0.35
MECP2-201ENST00000303391 BMS1Q14692 1282 aaKnown RBP12.85□□□□□ -0.35
MECP2-201ENST00000303391 FIBPO43427 364 aa12.85□□□□□ -0.35
MECP2-201ENST00000303391 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.85□□□□□ -0.352e-6■■■■■ 88.3
MECP2-201ENST00000303391 EPB41L2O43491 1005 aaKnown RBP12.85□□□□□ -0.35
MECP2-201ENST00000303391 PPP6R1Q9UPN7 881 aa12.85□□□□□ -0.35
MECP2-201ENST00000303391 KIF5CO60282 957 aa12.85□□□□□ -0.35
MECP2-201ENST00000303391 CENPHQ9H3R5 247 aa12.85□□□□□ -0.35
MECP2-201ENST00000303391 CYP46A1Q9Y6A2 500 aa12.85□□□□□ -0.35
MECP2-201ENST00000303391 ARHGAP29Q52LW3 1261 aa12.84□□□□□ -0.35
MECP2-201ENST00000303391 DIAPH1O60610 1272 aaKnown RBP12.84□□□□□ -0.35
MECP2-201ENST00000303391 STK26Q9P289 416 aa12.84□□□□□ -0.35
MECP2-201ENST00000303391 ZNF397Q8NF99 534 aaPredicted RBP12.84□□□□□ -0.35
MECP2-201ENST00000303391 RRP7AQ9Y3A4 280 aaKnown RBP12.84□□□□□ -0.35
MECP2-201ENST00000303391 GTF2A1P52655 376 aaPredicted RBP12.84□□□□□ -0.35
MECP2-201ENST00000303391 BCL2L13Q9BXK5 485 aa12.84□□□□□ -0.35
MECP2-201ENST00000303391 ZMYND15Q9H091 742 aa12.84□□□□□ -0.35
MECP2-201ENST00000303391 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
MECP2-201ENST00000303391 UVSSAQ2YD98 709 aa12.83□□□□□ -0.35
MECP2-201ENST00000303391 CLCN1P35523 988 aa12.83□□□□□ -0.36
MECP2-201ENST00000303391 KRT32Q14532 448 aa12.83□□□□□ -0.36
MECP2-201ENST00000303391 CCAR1Q8IX12 1150 aaKnown RBP12.83□□□□□ -0.36
MECP2-201ENST00000303391 SPECC1LQ69YQ0 1117 aa12.83□□□□□ -0.36
MECP2-201ENST00000303391 MROH2BQ7Z745 1585 aa12.83□□□□□ -0.36
MECP2-201ENST00000303391 TRIM34Q9BYJ4 488 aa12.83□□□□□ -0.36
MECP2-201ENST00000303391 UPF3BQ9BZI7 483 aaKnown RBP12.83□□□□□ -0.36
MECP2-201ENST00000303391 CSB-PGBD3P0DP91 1061 aa12.83□□□□□ -0.36
MECP2-201ENST00000303391 FGD6Q6ZV73 1430 aa12.83□□□□□ -0.36
MECP2-201ENST00000303391 CCDC171Q6TFL3 1326 aa12.83□□□□□ -0.36
MECP2-201ENST00000303391 SLC3A2P08195 630 aaKnown RBP12.83□□□□□ -0.36
MECP2-201ENST00000303391 GCOM1H8Y6P7 765 aaPredicted RBP12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 117.9 ms