RNA–Protein interactions for RNA: ENST00000301843.12

CTTN-201, Transcript of cortactin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTTN, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-201ENST00000301843 TMPOP42166 694 aaKnown RBP17.16■□□□□ 0.34
CTTN-201ENST00000301843 NEXMIFQ5QGS0 1516 aa17.16■□□□□ 0.34
CTTN-201ENST00000301843 TRIM35Q9UPQ4 493 aa17.15■□□□□ 0.34
CTTN-201ENST00000301843 USP32Q8NFA0 1604 aa17.15■□□□□ 0.34
CTTN-201ENST00000301843 IQSEC2Q5JU85 1478 aa17.15■□□□□ 0.34
CTTN-201ENST00000301843 RIPK4P57078 832 aa17.15■□□□□ 0.34
CTTN-201ENST00000301843 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.14■□□□□ 0.33
CTTN-201ENST00000301843 NINLQ9Y2I6 1382 aa17.14■□□□□ 0.33
CTTN-201ENST00000301843 VGFO15240 615 aaPredicted RBP17.13■□□□□ 0.33
CTTN-201ENST00000301843 ARHGEF28Q8N1W1 1705 aaKnown RBP17.13■□□□□ 0.33
CTTN-201ENST00000301843 VIRMAQ69YN4 1812 aaKnown RBP17.13■□□□□ 0.33
CTTN-201ENST00000301843 EVC2Q86UK5 1308 aa17.13■□□□□ 0.33
CTTN-201ENST00000301843 ARHGAP31Q2M1Z3 1444 aa17.13■□□□□ 0.33
CTTN-201ENST00000301843 RICTORQ6R327 1708 aa17.12■□□□□ 0.33
CTTN-201ENST00000301843 HMOX1P09601 288 aa17.12■□□□□ 0.33
CTTN-201ENST00000301843 PUS7Q96PZ0 661 aaKnown RBP17.12■□□□□ 0.33
CTTN-201ENST00000301843 TULP4Q9NRJ4 1543 aa17.11■□□□□ 0.33
CTTN-201ENST00000301843 MCM4P33991 863 aa17.11■□□□□ 0.33
CTTN-201ENST00000301843 ATF7IPQ6VMQ6 1270 aa17.11■□□□□ 0.33
CTTN-201ENST00000301843 XRCC6P12956 609 aaKnown RBP eCLIP17.11■□□□□ 0.335e-6■■■■■ 27.9
CTTN-201ENST00000301843 A0A1W2PP64 1363 aa17.1■□□□□ 0.33
CTTN-201ENST00000301843 IDI1Q13907 227 aa17.09■□□□□ 0.33
CTTN-201ENST00000301843 PLEKHF1Q96S99 279 aa17.09■□□□□ 0.33
CTTN-201ENST00000301843 CCDC27Q2M243 656 aa17.08■□□□□ 0.33
CTTN-201ENST00000301843 FYB1O15117 783 aa17.08■□□□□ 0.32
CTTN-201ENST00000301843 PRAM1Q96QH2 718 aa17.08■□□□□ 0.32
CTTN-201ENST00000301843 ANKRD36BQ8N2N9 1353 aa17.08■□□□□ 0.32
CTTN-201ENST00000301843 ZFYVE9O95405 1425 aa17.08■□□□□ 0.32
CTTN-201ENST00000301843 FAM43AQ8N2R8 423 aa17.08■□□□□ 0.32
CTTN-201ENST00000301843 RBM42Q9BTD8 480 aaKnown RBP17.08■□□□□ 0.32
CTTN-201ENST00000301843 YEATS2Q9ULM3 1422 aa17.08■□□□□ 0.32
CTTN-201ENST00000301843 TRAK2O60296 914 aa17.07■□□□□ 0.32
CTTN-201ENST00000301843 DDX19BQ9UMR2 479 aa17.07■□□□□ 0.32
CTTN-201ENST00000301843 GOLGA6L3A6NEY3 463 aa17.07■□□□□ 0.32
CTTN-201ENST00000301843 ANKRD45Q5TZF3 282 aa17.06■□□□□ 0.32
CTTN-201ENST00000301843 HSCBQ8IWL3 235 aa17.06■□□□□ 0.32
CTTN-201ENST00000301843 SLC52A1Q9NWF4 448 aa17.06■□□□□ 0.32
CTTN-201ENST00000301843 NSD2O96028 1365 aa17.05■□□□□ 0.32
CTTN-201ENST00000301843 TSPYL6Q8N831 410 aa17.05■□□□□ 0.32
CTTN-201ENST00000301843 CD2BP2O95400 341 aaKnown RBP17.05■□□□□ 0.32
CTTN-201ENST00000301843 PRKAR2BP31323 418 aa17.05■□□□□ 0.32
CTTN-201ENST00000301843 CABP1Q9NZU7 370 aa17.05■□□□□ 0.32
CTTN-201ENST00000301843 ZBTB40Q9NUA8 1239 aa17.04■□□□□ 0.32
CTTN-201ENST00000301843 PHACTR3Q96KR7 559 aa17.04■□□□□ 0.32
CTTN-201ENST00000301843 MYO5BQ9ULV0 1848 aa17.04■□□□□ 0.32
CTTN-201ENST00000301843 PREX1Q8TCU6 1659 aa17.04■□□□□ 0.32
CTTN-201ENST00000301843 DIAPH1O60610 1272 aaKnown RBP17.04■□□□□ 0.32
CTTN-201ENST00000301843 CHMP5Q9NZZ3 219 aa17.04■□□□□ 0.32
CTTN-201ENST00000301843 ATAD2Q6PL18 1390 aa17.04■□□□□ 0.32
CTTN-201ENST00000301843 TMEM131LA2VDJ0 1609 aa17.03■□□□□ 0.32
CTTN-201ENST00000301843 APBB1O00213 710 aa17.02■□□□□ 0.32
CTTN-201ENST00000301843 HSP90AA1P07900 732 aaKnown RBP17.02■□□□□ 0.32
CTTN-201ENST00000301843 HDAC1Q13547 482 aaPredicted RBP17.02■□□□□ 0.31
CTTN-201ENST00000301843 L1TD1Q5T7N2 865 aaKnown RBP17.02■□□□□ 0.31
CTTN-201ENST00000301843 ZRANB1Q9UGI0 708 aa17.02■□□□□ 0.31
CTTN-201ENST00000301843 HSP90AB1P08238 724 aaKnown RBP17.01■□□□□ 0.31
CTTN-201ENST00000301843 SMC5Q8IY18 1101 aa17.01■□□□□ 0.31
CTTN-201ENST00000301843 FBXO31Q5XUX0 539 aaPredicted RBP17.01■□□□□ 0.31
CTTN-201ENST00000301843 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
CTTN-201ENST00000301843 WAPLQ7Z5K2 1190 aa17■□□□□ 0.31
CTTN-201ENST00000301843 CHD1LQ86WJ1 897 aa17■□□□□ 0.31
CTTN-201ENST00000301843 FAM83GA6ND36 823 aa16.99■□□□□ 0.31
CTTN-201ENST00000301843 PTPRMP28827 1452 aa16.99■□□□□ 0.31
CTTN-201ENST00000301843 AAMPQ13685 434 aa16.99■□□□□ 0.31
CTTN-201ENST00000301843 EMILIN1Q9Y6C2 1016 aa16.99■□□□□ 0.31
CTTN-201ENST00000301843 ABCC11Q96J66 1382 aa16.99■□□□□ 0.31
CTTN-201ENST00000301843 NUCB1Q02818 461 aa16.98■□□□□ 0.31
CTTN-201ENST00000301843 TNPO1Q92973 898 aaKnown RBP16.98■□□□□ 0.31
CTTN-201ENST00000301843 NAP1L5Q96NT1 182 aaPredicted RBP16.98■□□□□ 0.31
CTTN-201ENST00000301843 CDK19Q9BWU1 502 aa16.98■□□□□ 0.31
CTTN-201ENST00000301843 ZNF692Q9BU19 519 aaPredicted RBP16.98■□□□□ 0.31
CTTN-201ENST00000301843 NCKAP5LQ9HCH0 1330 aa16.98■□□□□ 0.31
CTTN-201ENST00000301843 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
CTTN-201ENST00000301843 TERF2IPQ9NYB0 399 aa16.97■□□□□ 0.31
CTTN-201ENST00000301843 ADGRB2O60241 1585 aa16.96■□□□□ 0.31
CTTN-201ENST00000301843 IPO8O15397 1037 aaKnown RBP16.96■□□□□ 0.31
CTTN-201ENST00000301843 GAS2L3Q86XJ1 694 aa16.96■□□□□ 0.31
CTTN-201ENST00000301843 STAG3Q9UJ98 1225 aa16.96■□□□□ 0.31
CTTN-201ENST00000301843 YTHDC2Q9H6S0 1430 aaKnown RBP16.95■□□□□ 0.3
CTTN-201ENST00000301843 CLTCQ00610 1675 aaKnown RBP16.95■□□□□ 0.3
CTTN-201ENST00000301843 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
CTTN-201ENST00000301843 KRT24Q2M2I5 525 aa16.95■□□□□ 0.3
CTTN-201ENST00000301843 SIRT2Q8IXJ6 389 aa16.95■□□□□ 0.3
CTTN-201ENST00000301843 KIF16BQ96L93 1317 aa16.94■□□□□ 0.3
CTTN-201ENST00000301843 RRS1Q15050 365 aaKnown RBP16.94■□□□□ 0.3
CTTN-201ENST00000301843 TBC1D9Q6ZT07 1266 aa16.94■□□□□ 0.3
CTTN-201ENST00000301843 C16orf71Q8IYS4 520 aaPredicted RBP16.94■□□□□ 0.3
CTTN-201ENST00000301843 HDGFL2Q7Z4V5 671 aaPredicted RBP16.94■□□□□ 0.3
CTTN-201ENST00000301843 KIF2CQ99661 725 aa16.94■□□□□ 0.3
CTTN-201ENST00000301843 POLKQ9UBT6 870 aa16.94■□□□□ 0.3
CTTN-201ENST00000301843 CD163L1Q9NR16 1453 aa16.93■□□□□ 0.3
CTTN-201ENST00000301843 SOX12O15370 315 aa16.93■□□□□ 0.3
CTTN-201ENST00000301843 ZBTB7BO15156 539 aaPredicted RBP16.93■□□□□ 0.3
CTTN-201ENST00000301843 SSFA2P28290 1259 aa16.93■□□□□ 0.3
CTTN-201ENST00000301843 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
CTTN-201ENST00000301843 ALKQ9UM73 1620 aa16.93■□□□□ 0.3
CTTN-201ENST00000301843 PPIP5K1Q6PFW1 1433 aa16.93■□□□□ 0.3
CTTN-201ENST00000301843 C8orf58Q8NAV2 365 aa16.92■□□□□ 0.3
CTTN-201ENST00000301843 GRPEL1Q9HAV7 217 aa16.92■□□□□ 0.3
CTTN-201ENST00000301843 ANKRD26Q9UPS8 1709 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms