RNA–Protein interactions for RNA: ENST00000299084.8

SPRED1-201, Transcript of sprouty related EVH1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPRED1, Length 7,780 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED1-201ENST00000299084 TAX1BP1Q86VP1 789 aa17.07■□□□□ 0.32
SPRED1-201ENST00000299084 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.07■□□□□ 0.32
SPRED1-201ENST00000299084 DDX23Q9BUQ8 820 aaKnown RBP17.07■□□□□ 0.32
SPRED1-201ENST00000299084 PSMD1Q99460 953 aa17.07■□□□□ 0.32
SPRED1-201ENST00000299084 ATP2B1P20020 1258 aa17.06■□□□□ 0.32
SPRED1-201ENST00000299084 ZKSCAN2Q63HK3 967 aa17.06■□□□□ 0.32
SPRED1-201ENST00000299084 C16orf71Q8IYS4 520 aaPredicted RBP17.06■□□□□ 0.32
SPRED1-201ENST00000299084 RSPH4AQ5TD94 716 aa17.06■□□□□ 0.32
SPRED1-201ENST00000299084 PPM1EQ8WY54 764 aa17.06■□□□□ 0.32
SPRED1-201ENST00000299084 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.32
SPRED1-201ENST00000299084 WDR78Q5VTH9 848 aa17.06■□□□□ 0.32
SPRED1-201ENST00000299084 KIAA0754O94854 1291 aa17.05■□□□□ 0.32
SPRED1-201ENST00000299084 CYB5RLQ6IPT4 315 aa17.05■□□□□ 0.32
SPRED1-201ENST00000299084 CRBNQ96SW2 442 aa17.05■□□□□ 0.32
SPRED1-201ENST00000299084 SMG6Q86US8 1419 aaKnown RBP17.05■□□□□ 0.32
SPRED1-201ENST00000299084 EPB41L2O43491 1005 aaKnown RBP17.05■□□□□ 0.32
SPRED1-201ENST00000299084 CCDC66A2RUB6 948 aa17.05■□□□□ 0.32
SPRED1-201ENST00000299084 PDE3BQ13370 1112 aa17.05■□□□□ 0.32
SPRED1-201ENST00000299084 CCDC150Q8NCX0 1101 aa17.05■□□□□ 0.32
SPRED1-201ENST00000299084 MINK1Q8N4C8 1332 aaPredicted RBP17.05■□□□□ 0.32
SPRED1-201ENST00000299084 SOGA1O94964 1423 aa17.04■□□□□ 0.32
SPRED1-201ENST00000299084 BMP2KQ9NSY1 1161 aaPredicted RBP17.04■□□□□ 0.32
SPRED1-201ENST00000299084 SSX2IPQ9Y2D8 614 aa17.04■□□□□ 0.32
SPRED1-201ENST00000299084 MROH2BQ7Z745 1585 aa17.04■□□□□ 0.32
SPRED1-201ENST00000299084 SMARCA2P51531 1590 aa17.03■□□□□ 0.32
SPRED1-201ENST00000299084 CNTROBQ8N137 903 aa17.03■□□□□ 0.32
SPRED1-201ENST00000299084 CETN2P41208 172 aa17.03■□□□□ 0.32
SPRED1-201ENST00000299084 HNRNPMP52272 730 aaKnown RBP eCLIP17.03■□□□□ 0.32
SPRED1-201ENST00000299084 CARMIL1Q5VZK9 1371 aa17.03■□□□□ 0.32
SPRED1-201ENST00000299084 MRPS9P82933 396 aaKnown RBP17.03■□□□□ 0.32
SPRED1-201ENST00000299084 CCDC158Q5M9N0 1113 aa17.03■□□□□ 0.32
SPRED1-201ENST00000299084 INTS3Q68E01 1043 aaKnown RBP17.03■□□□□ 0.32
SPRED1-201ENST00000299084 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.03■□□□□ 0.32
SPRED1-201ENST00000299084 CENPHQ9H3R5 247 aa17.03■□□□□ 0.32
SPRED1-201ENST00000299084 GSE1Q14687 1217 aa17.02■□□□□ 0.32
SPRED1-201ENST00000299084 BCL2L13Q9BXK5 485 aa17.02■□□□□ 0.32
SPRED1-201ENST00000299084 SMC2O95347 1197 aa17.02■□□□□ 0.32
SPRED1-201ENST00000299084 CBX1P83916 185 aa17.02■□□□□ 0.32
SPRED1-201ENST00000299084 GPRASP1Q5JY77 1395 aa17.02■□□□□ 0.32
SPRED1-201ENST00000299084 CCDC88BA6NC98 1476 aa17.02■□□□□ 0.31
SPRED1-201ENST00000299084 CCP110O43303 1012 aa17.02■□□□□ 0.31
SPRED1-201ENST00000299084 NACAP1Q9BZK3 213 aa17.02■□□□□ 0.31
SPRED1-201ENST00000299084 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.01■□□□□ 0.31
SPRED1-201ENST00000299084 FAM43AQ8N2R8 423 aa17■□□□□ 0.31
SPRED1-201ENST00000299084 LRSAM1Q6UWE0 723 aa17■□□□□ 0.31
SPRED1-201ENST00000299084 MPHOSPH8Q99549 860 aa17■□□□□ 0.31
SPRED1-201ENST00000299084 CCDC69A6NI79 296 aa17■□□□□ 0.31
SPRED1-201ENST00000299084 TAF3Q5VWG9 929 aa17■□□□□ 0.31
SPRED1-201ENST00000299084 KINO60870 393 aaKnown RBP17■□□□□ 0.31
SPRED1-201ENST00000299084 DNAJC2Q99543 621 aaKnown RBP17■□□□□ 0.31
SPRED1-201ENST00000299084 JAKMIP3Q5VZ66 844 aa17■□□□□ 0.31
SPRED1-201ENST00000299084 API5Q9BZZ5 524 aaKnown RBP17■□□□□ 0.31
SPRED1-201ENST00000299084 UBTFL1P0CB47 393 aaPredicted RBP16.99■□□□□ 0.31
SPRED1-201ENST00000299084 FSD1Q9BTV5 496 aa16.99■□□□□ 0.31
SPRED1-201ENST00000299084 DIAPH1O60610 1272 aaKnown RBP16.99■□□□□ 0.31
SPRED1-201ENST00000299084 NOP2P46087 812 aaKnown RBP16.99■□□□□ 0.31
SPRED1-201ENST00000299084 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
SPRED1-201ENST00000299084 SSBP05455 408 aaKnown RBP eCLIP16.98■□□□□ 0.31
SPRED1-201ENST00000299084 TRIM22Q8IYM9 498 aa16.98■□□□□ 0.31
SPRED1-201ENST00000299084 CEP63Q96MT8 703 aa16.98■□□□□ 0.31
SPRED1-201ENST00000299084 GIMAP7Q8NHV1 300 aa16.98■□□□□ 0.31
SPRED1-201ENST00000299084 PPP1R12BO60237 982 aaPredicted RBP16.97■□□□□ 0.31
SPRED1-201ENST00000299084 DDX19BQ9UMR2 479 aa16.97■□□□□ 0.31
SPRED1-201ENST00000299084 NUTM2GQ5VZR2 741 aa16.97■□□□□ 0.31
SPRED1-201ENST00000299084 GIGYF2Q6Y7W6 1299 aaKnown RBP16.97■□□□□ 0.31
SPRED1-201ENST00000299084 HIP1O00291 1037 aa16.97■□□□□ 0.31
SPRED1-201ENST00000299084 ZMYND15Q9H091 742 aa16.97■□□□□ 0.31
SPRED1-201ENST00000299084 GOLGA6L10A0A0M3HER8 536 aa16.97■□□□□ 0.31
SPRED1-201ENST00000299084 KIF7Q2M1P5 1343 aa16.97■□□□□ 0.31
SPRED1-201ENST00000299084 CCDC57Q2TAC2 916 aa16.96■□□□□ 0.31
SPRED1-201ENST00000299084 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
SPRED1-201ENST00000299084 RGS22Q8NE09 1264 aa16.96■□□□□ 0.31
SPRED1-201ENST00000299084 ZNF396Q96N95 335 aaPredicted RBP16.96■□□□□ 0.31
SPRED1-201ENST00000299084 DACH1Q9UI36 760 aa16.96■□□□□ 0.31
SPRED1-201ENST00000299084 USP5P45974 858 aa16.96■□□□□ 0.31
SPRED1-201ENST00000299084 RFX1P22670 979 aa16.96■□□□□ 0.31
SPRED1-201ENST00000299084 PRDM2Q13029 1718 aa16.96■□□□□ 0.31
SPRED1-201ENST00000299084 FERMT2Q96AC1 680 aa16.95■□□□□ 0.3
SPRED1-201ENST00000299084 PPFIBP1Q86W92 1011 aa16.95■□□□□ 0.3
SPRED1-201ENST00000299084 MPHOSPH9Q99550 1183 aa16.95■□□□□ 0.3
SPRED1-201ENST00000299084 RIPK4P57078 832 aa16.95■□□□□ 0.3
SPRED1-201ENST00000299084 E9PSI1 815 aa16.95■□□□□ 0.3
SPRED1-201ENST00000299084 JMYQ8N9B5 988 aa16.95■□□□□ 0.3
SPRED1-201ENST00000299084 NLRP13Q86W25 1043 aa16.95■□□□□ 0.3
SPRED1-201ENST00000299084 CENPQQ7L2Z9 268 aaPredicted RBP16.94■□□□□ 0.3
SPRED1-201ENST00000299084 SETD5Q9C0A6 1442 aa16.94■□□□□ 0.3
SPRED1-201ENST00000299084 VTI1AQ96AJ9 217 aa16.94■□□□□ 0.3
SPRED1-201ENST00000299084 EIF3JO75822 258 aaKnown RBP16.94■□□□□ 0.3
SPRED1-201ENST00000299084 SLC26A8Q96RN1 970 aa16.94■□□□□ 0.3
SPRED1-201ENST00000299084 ABTB2Q8N961 1025 aa16.94■□□□□ 0.3
SPRED1-201ENST00000299084 NOL7Q9UMY1 257 aaKnown RBP16.94■□□□□ 0.3
SPRED1-201ENST00000299084 TOM1L2Q6ZVM7 507 aa16.94■□□□□ 0.3
SPRED1-201ENST00000299084 CABP4P57796 275 aa16.93■□□□□ 0.3
SPRED1-201ENST00000299084 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
SPRED1-201ENST00000299084 ZWINTO95229 277 aa16.93■□□□□ 0.3
SPRED1-201ENST00000299084 MAPK8IP2Q13387 824 aaPredicted RBP16.93■□□□□ 0.3
SPRED1-201ENST00000299084 IQCEQ6IPM2 695 aa16.93■□□□□ 0.3
SPRED1-201ENST00000299084 FAM193AP78312 1265 aa16.93■□□□□ 0.3
SPRED1-201ENST00000299084 ANKRD18BA2A2Z9 1011 aa16.93■□□□□ 0.3
SPRED1-201ENST00000299084 GRM1Q13255 1194 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms