RNA–Protein interactions for RNA: ENST00000296800.4

PRKAA1-201, Transcript of protein kinase AMP-activated catalytic subunit alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PRKAA1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAA1-201ENST00000296800 HLA-CQ95604 372 aa11.4□□□□□ -0.58
PRKAA1-201ENST00000296800 DXOO77932 396 aaKnown RBP11.39□□□□□ -0.59
PRKAA1-201ENST00000296800 GPCPD1Q9NPB8 672 aa11.39□□□□□ -0.59
PRKAA1-201ENST00000296800 FGD5Q6ZNL6 1462 aa11.38□□□□□ -0.59
PRKAA1-201ENST00000296800 LAMC3Q9Y6N6 1575 aa11.38□□□□□ -0.59
PRKAA1-201ENST00000296800 HOXA2O43364 376 aa11.38□□□□□ -0.59
PRKAA1-201ENST00000296800 CLCN1P35523 988 aa11.38□□□□□ -0.59
PRKAA1-201ENST00000296800 FANCD2Q9BXW9 1451 aa11.38□□□□□ -0.59
PRKAA1-201ENST00000296800 ARAP1Q96P48 1450 aa11.37□□□□□ -0.59
PRKAA1-201ENST00000296800 KIFC2Q96AC6 838 aa11.36□□□□□ -0.59
PRKAA1-201ENST00000296800 FAM217BQ9NTX9 383 aaPredicted RBP11.36□□□□□ -0.59
PRKAA1-201ENST00000296800 SKOR1P84550 965 aa11.35□□□□□ -0.59
PRKAA1-201ENST00000296800 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.35□□□□□ -0.59
PRKAA1-201ENST00000296800 REPIN1Q9BWE0 567 aaKnown RBP11.35□□□□□ -0.59
PRKAA1-201ENST00000296800 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
PRKAA1-201ENST00000296800 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
PRKAA1-201ENST00000296800 CCDC24Q8N4L8 307 aa11.34□□□□□ -0.59
PRKAA1-201ENST00000296800 KRI1Q8N9T8 703 aaKnown RBP11.34□□□□□ -0.59
PRKAA1-201ENST00000296800 GUCA2AQ02747 115 aa11.33□□□□□ -0.6
PRKAA1-201ENST00000296800 CUL7Q14999 1698 aa11.33□□□□□ -0.6
PRKAA1-201ENST00000296800 NUTM1Q86Y26 1132 aa11.32□□□□□ -0.6
PRKAA1-201ENST00000296800 SYMPKQ92797 1274 aaKnown RBP11.31□□□□□ -0.6
PRKAA1-201ENST00000296800 ABCA10Q8WWZ4 1543 aa11.3□□□□□ -0.6
PRKAA1-201ENST00000296800 TOPBP1Q92547 1522 aa11.3□□□□□ -0.6
PRKAA1-201ENST00000296800 GMPRP36959 345 aa11.3□□□□□ -0.6
PRKAA1-201ENST00000296800 SLC16A10Q8TF71 515 aa11.3□□□□□ -0.6
PRKAA1-201ENST00000296800 ALDH1A1P00352 501 aa11.29□□□□□ -0.6
PRKAA1-201ENST00000296800 JUNDP17535 347 aa11.29□□□□□ -0.6
PRKAA1-201ENST00000296800 NXF1Q9UBU9 619 aaKnown RBP11.29□□□□□ -0.6
PRKAA1-201ENST00000296800 LORP23490 312 aaPredicted RBP11.28□□□□□ -0.6
PRKAA1-201ENST00000296800 CTTNBP2Q8WZ74 1663 aa11.27□□□□□ -0.6
PRKAA1-201ENST00000296800 ARHGAP35Q9NRY4 1499 aa11.27□□□□□ -0.6
PRKAA1-201ENST00000296800 BMP1P13497 986 aa11.27□□□□□ -0.61
PRKAA1-201ENST00000296800 VEGFBP49765 207 aa11.27□□□□□ -0.61
PRKAA1-201ENST00000296800 WNT7BP56706 349 aa11.27□□□□□ -0.61
PRKAA1-201ENST00000296800 RETREG3Q86VR2 466 aa11.27□□□□□ -0.61
PRKAA1-201ENST00000296800 POLA1P09884 1462 aaPredicted RBP11.26□□□□□ -0.61
PRKAA1-201ENST00000296800 FAM181BA6NEQ2 426 aa11.26□□□□□ -0.61
PRKAA1-201ENST00000296800 SSTR3P32745 418 aaPredicted RBP11.26□□□□□ -0.61
PRKAA1-201ENST00000296800 CFAP43Q8NDM7 1665 aa11.25□□□□□ -0.61
PRKAA1-201ENST00000296800 FDX1P10109 184 aa11.25□□□□□ -0.61
PRKAA1-201ENST00000296800 TRIM46Q7Z4K8 759 aa11.25□□□□□ -0.61
PRKAA1-201ENST00000296800 ZSCAN1Q8NBB4 408 aa11.25□□□□□ -0.61
PRKAA1-201ENST00000296800 TTBK1Q5TCY1 1321 aaPredicted RBP11.25□□□□□ -0.61
PRKAA1-201ENST00000296800 NESP48681 1621 aa11.24□□□□□ -0.61
PRKAA1-201ENST00000296800 ABCA5Q8WWZ7 1642 aa11.24□□□□□ -0.61
PRKAA1-201ENST00000296800 PCDHGC3Q9UN70 934 aa11.24□□□□□ -0.61
PRKAA1-201ENST00000296800 EFCAB5A4FU69 1503 aa11.24□□□□□ -0.61
PRKAA1-201ENST00000296800 BARGINQ6ZT62 677 aa11.23□□□□□ -0.61
PRKAA1-201ENST00000296800 CCER1Q8TC90 406 aaPredicted RBP11.23□□□□□ -0.61
PRKAA1-201ENST00000296800 NUDT12Q9BQG2 462 aa11.23□□□□□ -0.61
PRKAA1-201ENST00000296800 IGF1RP08069 1367 aa11.23□□□□□ -0.61
PRKAA1-201ENST00000296800 MAP3K1Q13233 1512 aa11.23□□□□□ -0.61
PRKAA1-201ENST00000296800 KIF21AQ7Z4S6 1674 aa11.23□□□□□ -0.61
PRKAA1-201ENST00000296800 C6orf229H3BNL8 230 aa11.22□□□□□ -0.61
PRKAA1-201ENST00000296800 URB2Q14146 1524 aaKnown RBP11.22□□□□□ -0.61
PRKAA1-201ENST00000296800 CARMIL1Q5VZK9 1371 aa11.22□□□□□ -0.61
PRKAA1-201ENST00000296800 PTCRAQ6ISU1 281 aaPredicted RBP11.22□□□□□ -0.61
PRKAA1-201ENST00000296800 SPIRE2Q8WWL2 714 aa11.22□□□□□ -0.61
PRKAA1-201ENST00000296800 IRF7Q92985 503 aa11.22□□□□□ -0.61
PRKAA1-201ENST00000296800 SIAH2O43255 324 aa11.21□□□□□ -0.61
PRKAA1-201ENST00000296800 ZMYND10O75800 440 aa11.21□□□□□ -0.61
PRKAA1-201ENST00000296800 TIAM1Q13009 1591 aa11.2□□□□□ -0.62
PRKAA1-201ENST00000296800 PDS5BQ9NTI5 1447 aa11.2□□□□□ -0.62
PRKAA1-201ENST00000296800 CAPN5O15484 640 aaPredicted RBP11.2□□□□□ -0.62
PRKAA1-201ENST00000296800 ERBB4Q15303 1308 aa11.19□□□□□ -0.62
PRKAA1-201ENST00000296800 LOC100996750A0A140TA64 210 aa11.19□□□□□ -0.62
PRKAA1-201ENST00000296800 NDUFV2P19404 249 aa11.19□□□□□ -0.62
PRKAA1-201ENST00000296800 KRTAP4-6Q9BYQ5 205 aa11.19□□□□□ -0.62
PRKAA1-201ENST00000296800 PCF11O94913 1555 aaKnown RBP11.19□□□□□ -0.62
PRKAA1-201ENST00000296800 RAD54L2Q9Y4B4 1467 aa11.19□□□□□ -0.62
PRKAA1-201ENST00000296800 H3BM21 787 aa11.18□□□□□ -0.62
PRKAA1-201ENST00000296800 TTLL12Q14166 644 aaPredicted RBP11.18□□□□□ -0.62
PRKAA1-201ENST00000296800 AMHR2Q16671 573 aa11.18□□□□□ -0.62
PRKAA1-201ENST00000296800 NPAS3Q8IXF0 933 aa11.18□□□□□ -0.62
PRKAA1-201ENST00000296800 EHBP1Q8NDI1 1231 aa11.18□□□□□ -0.62
PRKAA1-201ENST00000296800 THOC2Q8NI27 1593 aaKnown RBP11.18□□□□□ -0.62
PRKAA1-201ENST00000296800 MS4A1P11836 297 aa11.17□□□□□ -0.62
PRKAA1-201ENST00000296800 WASF2Q9Y6W5 498 aa11.17□□□□□ -0.62
PRKAA1-201ENST00000296800 FHAD1B1AJZ9 1412 aa11.17□□□□□ -0.62
PRKAA1-201ENST00000296800 RRBP1Q9P2E9 1410 aaKnown RBP11.17□□□□□ -0.62
PRKAA1-201ENST00000296800 MOXD2PA6NHM9 499 aa11.16□□□□□ -0.62
PRKAA1-201ENST00000296800 CCNYL3P0C7X3 344 aa11.16□□□□□ -0.62
PRKAA1-201ENST00000296800 CYB5RLQ6IPT4 315 aa11.16□□□□□ -0.62
PRKAA1-201ENST00000296800 ZC3H15Q8WU90 426 aaKnown RBP11.16□□□□□ -0.62
PRKAA1-201ENST00000296800 PBRM1Q86U86 1689 aa11.15□□□□□ -0.62
PRKAA1-201ENST00000296800 RIMBP3CA6NJZ7 1639 aa11.14□□□□□ -0.63
PRKAA1-201ENST00000296800 RIMBP3BA6NNM3 1639 aa11.14□□□□□ -0.63
PRKAA1-201ENST00000296800 RIMBP3Q9UFD9 1639 aa11.14□□□□□ -0.63
PRKAA1-201ENST00000296800 RANGAP1P46060 587 aaPredicted RBP11.14□□□□□ -0.63
PRKAA1-201ENST00000296800 PTPRNQ16849 979 aa11.14□□□□□ -0.63
PRKAA1-201ENST00000296800 GIGYF2Q6Y7W6 1299 aaKnown RBP11.14□□□□□ -0.63
PRKAA1-201ENST00000296800 EVA1BQ9NVM1 165 aa11.14□□□□□ -0.63
PRKAA1-201ENST00000296800 TARBP1Q13395 1621 aaKnown RBP11.13□□□□□ -0.63
PRKAA1-201ENST00000296800 FYCO1Q9BQS8 1478 aa11.13□□□□□ -0.63
PRKAA1-201ENST00000296800 SH3BP2P78314 561 aa11.13□□□□□ -0.63
PRKAA1-201ENST00000296800 PRR7Q8TB68 274 aa11.13□□□□□ -0.63
PRKAA1-201ENST00000296800 ZFP42Q96MM3 310 aa11.13□□□□□ -0.63
PRKAA1-201ENST00000296800 AQRO60306 1485 aaKnown RBP eCLIP11.12□□□□□ -0.63
PRKAA1-201ENST00000296800 SAMD9Q5K651 1589 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.6 ms