RNA–Protein interactions for RNA: ENST00000296503.9

HMGB2-201, Transcript of high mobility group box 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGB2, Length 1,889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB2-201ENST00000296503 TESK2Q96S53 571 aa16.95■□□□□ 0.3
HMGB2-201ENST00000296503 ATAD2Q6PL18 1390 aa16.94■□□□□ 0.3
HMGB2-201ENST00000296503 COL22A1Q8NFW1 1626 aaPredicted RBP16.94■□□□□ 0.3
HMGB2-201ENST00000296503 NUTM2GQ5VZR2 741 aa16.93■□□□□ 0.3
HMGB2-201ENST00000296503 ZNF692Q9BU19 519 aaPredicted RBP16.93■□□□□ 0.3
HMGB2-201ENST00000296503 TOPAZ1Q8N9V7 1692 aa16.93■□□□□ 0.3
HMGB2-201ENST00000296503 ABTB2Q8N961 1025 aa16.93■□□□□ 0.3
HMGB2-201ENST00000296503 TMF1P82094 1093 aa16.92■□□□□ 0.3
HMGB2-201ENST00000296503 TRPM3Q9HCF6 1732 aaPredicted RBP16.91■□□□□ 0.3
HMGB2-201ENST00000296503 PUS7Q96PZ0 661 aaKnown RBP16.9■□□□□ 0.3
HMGB2-201ENST00000296503 USP21Q9UK80 565 aa16.9■□□□□ 0.3
HMGB2-201ENST00000296503 SLC12A5Q9H2X9 1139 aa16.9■□□□□ 0.3
HMGB2-201ENST00000296503 QTRT2Q9H974 415 aaKnown RBP16.9■□□□□ 0.3
HMGB2-201ENST00000296503 EIF4G2P78344 907 aaKnown RBP eCLIP16.88■□□□□ 0.292e-52■□□□□ 9.1
HMGB2-201ENST00000296503 FNBP4Q8N3X1 1017 aaPredicted RBP16.88■□□□□ 0.29
HMGB2-201ENST00000296503 HDGFL2Q7Z4V5 671 aaPredicted RBP16.88■□□□□ 0.29
HMGB2-201ENST00000296503 NLRP13Q86W25 1043 aa16.88■□□□□ 0.29
HMGB2-201ENST00000296503 ALS2Q96Q42 1657 aa16.87■□□□□ 0.29
HMGB2-201ENST00000296503 BRD4O60885 1362 aaPredicted RBP16.87■□□□□ 0.29
HMGB2-201ENST00000296503 USP6P35125 1406 aa16.87■□□□□ 0.29
HMGB2-201ENST00000296503 RXRBP28702 533 aa16.87■□□□□ 0.29
HMGB2-201ENST00000296503 KTN1Q86UP2 1357 aaKnown RBP16.87■□□□□ 0.29
HMGB2-201ENST00000296503 NLRP6P59044 892 aa16.86■□□□□ 0.29
HMGB2-201ENST00000296503 CDCA8Q53HL2 280 aa16.86■□□□□ 0.29
HMGB2-201ENST00000296503 TERF2IPQ9NYB0 399 aa16.86■□□□□ 0.29
HMGB2-201ENST00000296503 FAM83GA6ND36 823 aa16.85■□□□□ 0.29
HMGB2-201ENST00000296503 HSPA5P11021 654 aaKnown RBP16.85■□□□□ 0.29
HMGB2-201ENST00000296503 TTC21BQ7Z4L5 1316 aa16.85■□□□□ 0.29
HMGB2-201ENST00000296503 TRPC5Q9UL62 973 aaPredicted RBP16.84■□□□□ 0.29
HMGB2-201ENST00000296503 ZC3H6P61129 1189 aaKnown RBP16.84■□□□□ 0.29
HMGB2-201ENST00000296503 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.84■□□□□ 0.29
HMGB2-201ENST00000296503 CPSF1Q10570 1443 aaKnown RBP16.84■□□□□ 0.29
HMGB2-201ENST00000296503 MARF1Q9Y4F3 1742 aaKnown RBP16.83■□□□□ 0.29
HMGB2-201ENST00000296503 RBM6P78332 1123 aaKnown RBP16.82■□□□□ 0.28
HMGB2-201ENST00000296503 UNC5CLQ8IV45 518 aa16.82■□□□□ 0.28
HMGB2-201ENST00000296503 POLR3GLQ9BT43 218 aa16.82■□□□□ 0.28
HMGB2-201ENST00000296503 PRDM11Q9NQV5 511 aa16.82■□□□□ 0.28
HMGB2-201ENST00000296503 TTC21AQ8NDW8 1320 aa16.82■□□□□ 0.28
HMGB2-201ENST00000296503 SSH2Q76I76 1423 aa16.81■□□□□ 0.28
HMGB2-201ENST00000296503 GCP02774 474 aa16.81■□□□□ 0.28
HMGB2-201ENST00000296503 SOCS7O14512 581 aa16.8■□□□□ 0.28
HMGB2-201ENST00000296503 BTG4Q9NY30 223 aa16.8■□□□□ 0.28
HMGB2-201ENST00000296503 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
HMGB2-201ENST00000296503 AKAP12Q02952 1782 aa16.8■□□□□ 0.28
HMGB2-201ENST00000296503 NINLQ9Y2I6 1382 aa16.8■□□□□ 0.28
HMGB2-201ENST00000296503 CHRNA2Q15822 529 aa16.8■□□□□ 0.28
HMGB2-201ENST00000296503 ABCA3Q99758 1704 aa16.79■□□□□ 0.28
HMGB2-201ENST00000296503 ZBTB7CA1YPR0 619 aa16.79■□□□□ 0.28
HMGB2-201ENST00000296503 CCDC9Q9Y3X0 531 aaKnown RBP16.79■□□□□ 0.28
HMGB2-201ENST00000296503 A0A1W2PP64 1363 aa16.79■□□□□ 0.28
HMGB2-201ENST00000296503 KIAA0232Q92628 1395 aa16.79■□□□□ 0.28
HMGB2-201ENST00000296503 USP19O94966 1318 aa16.78■□□□□ 0.28
HMGB2-201ENST00000296503 SLIT2O94813 1529 aa16.78■□□□□ 0.28
HMGB2-201ENST00000296503 CD163L1Q9NR16 1453 aa16.78■□□□□ 0.28
HMGB2-201ENST00000296503 SOX12O15370 315 aa16.78■□□□□ 0.28
HMGB2-201ENST00000296503 GJD4Q96KN9 370 aaPredicted RBP16.78■□□□□ 0.28
HMGB2-201ENST00000296503 NME9Q86XW9 330 aa16.77■□□□□ 0.27
HMGB2-201ENST00000296503 ZRANB1Q9UGI0 708 aa16.76■□□□□ 0.27
HMGB2-201ENST00000296503 ATRNO75882 1429 aa16.76■□□□□ 0.27
HMGB2-201ENST00000296503 KCNH5Q8NCM2 988 aa16.76■□□□□ 0.27
HMGB2-201ENST00000296503 CRYBG1Q9Y4K1 1723 aa16.75■□□□□ 0.27
HMGB2-201ENST00000296503 EDC4Q6P2E9 1401 aaKnown RBP16.75■□□□□ 0.27
HMGB2-201ENST00000296503 EVA1CP58658 441 aa16.75■□□□□ 0.27
HMGB2-201ENST00000296503 VPS72Q15906 364 aa16.75■□□□□ 0.27
HMGB2-201ENST00000296503 PHRF1Q9P1Y6 1649 aaKnown RBP16.74■□□□□ 0.27
HMGB2-201ENST00000296503 MON2Q7Z3U7 1717 aa16.74■□□□□ 0.27
HMGB2-201ENST00000296503 ANKRD36BQ8N2N9 1353 aa16.74■□□□□ 0.27
HMGB2-201ENST00000296503 STRN4Q9NRL3 753 aa16.73■□□□□ 0.27
HMGB2-201ENST00000296503 PIK3C2AO00443 1686 aa16.73■□□□□ 0.27
HMGB2-201ENST00000296503 COL14A1Q05707 1796 aaKnown RBP16.73■□□□□ 0.27
HMGB2-201ENST00000296503 PLCH1Q4KWH8 1693 aa16.72■□□□□ 0.27
HMGB2-201ENST00000296503 CPDO75976 1380 aa16.72■□□□□ 0.27
HMGB2-201ENST00000296503 NWD2Q9ULI1 1742 aa16.71■□□□□ 0.27
HMGB2-201ENST00000296503 USP31Q70CQ4 1352 aa16.71■□□□□ 0.27
HMGB2-201ENST00000296503 NRKQ7Z2Y5 1582 aa16.71■□□□□ 0.27
HMGB2-201ENST00000296503 C11orf95C9JLR9 678 aaPredicted RBP16.7■□□□□ 0.26
HMGB2-201ENST00000296503 COG3Q96JB2 828 aa16.7■□□□□ 0.26
HMGB2-201ENST00000296503 CDK12Q9NYV4 1490 aaPredicted RBP16.7■□□□□ 0.26
HMGB2-201ENST00000296503 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.7■□□□□ 0.26
HMGB2-201ENST00000296503 ARHGEF25Q86VW2 580 aa16.69■□□□□ 0.26
HMGB2-201ENST00000296503 SLIT3O75094 1523 aa16.69■□□□□ 0.26
HMGB2-201ENST00000296503 A0A0G2JS52 829 aa16.68■□□□□ 0.26
HMGB2-201ENST00000296503 CARD14Q9BXL6 1004 aa16.68■□□□□ 0.26
HMGB2-201ENST00000296503 RGS12O14924 1447 aa16.68■□□□□ 0.26
HMGB2-201ENST00000296503 FYB1O15117 783 aa16.67■□□□□ 0.26
HMGB2-201ENST00000296503 GGNBP2Q9H3C7 697 aa16.67■□□□□ 0.26
HMGB2-201ENST00000296503 FAM98CQ17RN3 349 aaKnown RBP16.67■□□□□ 0.26
HMGB2-201ENST00000296503 USP35Q9P2H5 1018 aa16.67■□□□□ 0.26
HMGB2-201ENST00000296503 SPATA31A5Q5VU36 1347 aa16.67■□□□□ 0.26
HMGB2-201ENST00000296503 SPATA31A7Q8IWB4 1347 aa16.67■□□□□ 0.26
HMGB2-201ENST00000296503 AATKQ6ZMQ8 1374 aa16.67■□□□□ 0.26
HMGB2-201ENST00000296503 LARP1Q6PKG0 1096 aaKnown RBP16.66■□□□□ 0.26
HMGB2-201ENST00000296503 SEPT12Q8IYM1 358 aa16.66■□□□□ 0.26
HMGB2-201ENST00000296503 CAMTA1Q9Y6Y1 1673 aa16.66■□□□□ 0.26
HMGB2-201ENST00000296503 AXIN2Q9Y2T1 843 aa16.65■□□□□ 0.26
HMGB2-201ENST00000296503 GLI3P10071 1580 aa16.65■□□□□ 0.26
HMGB2-201ENST00000296503 NRAPQ86VF7 1730 aa16.65■□□□□ 0.26
HMGB2-201ENST00000296503 PANK3Q9H999 370 aa16.65■□□□□ 0.26
HMGB2-201ENST00000296503 NSD3Q9BZ95 1437 aa16.64■□□□□ 0.25
HMGB2-201ENST00000296503 ONECUT3O60422 494 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms