RNA–Protein interactions for RNA: ENST00000294129.6

NCKIPSD-201, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-201ENST00000294129 NINLQ9Y2I6 1382 aa20.34■□□□□ 0.85
NCKIPSD-201ENST00000294129 EXOSC9Q06265 439 aaKnown RBP20.33■□□□□ 0.85
NCKIPSD-201ENST00000294129 RIPK4P57078 832 aa20.33■□□□□ 0.84
NCKIPSD-201ENST00000294129 C8orf34Q49A92 452 aa20.33■□□□□ 0.84
NCKIPSD-201ENST00000294129 A2ML1A8K2U0 1454 aa20.32■□□□□ 0.84
NCKIPSD-201ENST00000294129 CCDC27Q2M243 656 aa20.32■□□□□ 0.84
NCKIPSD-201ENST00000294129 ZRANB1Q9UGI0 708 aa20.32■□□□□ 0.84
NCKIPSD-201ENST00000294129 HMOX1P09601 288 aa20.31■□□□□ 0.84
NCKIPSD-201ENST00000294129 PLEKHF1Q96S99 279 aa20.31■□□□□ 0.84
NCKIPSD-201ENST00000294129 RTL5Q5HYW3 569 aaPredicted RBP20.31■□□□□ 0.84
NCKIPSD-201ENST00000294129 FTSJ3Q8IY81 847 aaKnown RBP20.31■□□□□ 0.84
NCKIPSD-201ENST00000294129 SMC4Q9NTJ3 1288 aa20.31■□□□□ 0.84
NCKIPSD-201ENST00000294129 NUTM2FA1L443 756 aa20.31■□□□□ 0.84
NCKIPSD-201ENST00000294129 TRIM35Q9UPQ4 493 aa20.3■□□□□ 0.84
NCKIPSD-201ENST00000294129 PCDHB15Q9Y5E8 787 aa20.3■□□□□ 0.84
NCKIPSD-201ENST00000294129 ARHGEF40Q8TER5 1519 aa20.29■□□□□ 0.84
NCKIPSD-201ENST00000294129 NME9Q86XW9 330 aa20.28■□□□□ 0.84
NCKIPSD-201ENST00000294129 METP08581 1390 aa20.28■□□□□ 0.84
NCKIPSD-201ENST00000294129 EMILIN1Q9Y6C2 1016 aa20.28■□□□□ 0.84
NCKIPSD-201ENST00000294129 PRKAR2BP31323 418 aa20.27■□□□□ 0.84
NCKIPSD-201ENST00000294129 DAXXQ9UER7 740 aaPredicted RBP20.27■□□□□ 0.83
NCKIPSD-201ENST00000294129 NLRP1Q9C000 1473 aa20.26■□□□□ 0.83
NCKIPSD-201ENST00000294129 POLKQ9UBT6 870 aa20.26■□□□□ 0.83
NCKIPSD-201ENST00000294129 ZMYM3Q14202 1370 aa20.26■□□□□ 0.83
NCKIPSD-201ENST00000294129 THUMPD2Q9BTF0 503 aaKnown RBP20.25■□□□□ 0.83
NCKIPSD-201ENST00000294129 ZKSCAN2Q63HK3 967 aa20.25■□□□□ 0.83
NCKIPSD-201ENST00000294129 SSH1Q8WYL5 1049 aa20.25■□□□□ 0.83
NCKIPSD-201ENST00000294129 WASLO00401 505 aaPredicted RBP20.25■□□□□ 0.83
NCKIPSD-201ENST00000294129 PPP6R1Q9UPN7 881 aa20.25■□□□□ 0.83
NCKIPSD-201ENST00000294129 COL3A1P02461 1466 aaPredicted RBP20.25■□□□□ 0.83
NCKIPSD-201ENST00000294129 NEFMP07197 916 aa20.24■□□□□ 0.83
NCKIPSD-201ENST00000294129 DDRGK1Q96HY6 314 aa20.24■□□□□ 0.83
NCKIPSD-201ENST00000294129 RRS1Q15050 365 aaKnown RBP20.23■□□□□ 0.83
NCKIPSD-201ENST00000294129 DZIP1LQ8IYY4 767 aaKnown RBP20.23■□□□□ 0.83
NCKIPSD-201ENST00000294129 ITPRIPQ8IWB1 547 aa20.23■□□□□ 0.83
NCKIPSD-201ENST00000294129 NUDT16Q96DE0 195 aaKnown RBP20.22■□□□□ 0.83
NCKIPSD-201ENST00000294129 PPIP5K1Q6PFW1 1433 aa20.22■□□□□ 0.83
NCKIPSD-201ENST00000294129 AGLP35573 1532 aa20.22■□□□□ 0.83
NCKIPSD-201ENST00000294129 PHACTR3Q96KR7 559 aa20.22■□□□□ 0.83
NCKIPSD-201ENST00000294129 ADGRB2O60241 1585 aa20.21■□□□□ 0.83
NCKIPSD-201ENST00000294129 MVPQ14764 893 aaKnown RBP20.21■□□□□ 0.83
NCKIPSD-201ENST00000294129 PMFBP1Q8TBY8 1022 aa20.21■□□□□ 0.83
NCKIPSD-201ENST00000294129 SPATA31D1Q6ZQQ2 1576 aa20.21■□□□□ 0.83
NCKIPSD-201ENST00000294129 SOX12O15370 315 aa20.21■□□□□ 0.83
NCKIPSD-201ENST00000294129 NOB1Q9ULX3 412 aaKnown RBP20.21■□□□□ 0.83
NCKIPSD-201ENST00000294129 TRIM27P14373 513 aa20.2■□□□□ 0.82
NCKIPSD-201ENST00000294129 CEBPAP49715 358 aaPredicted RBP20.2■□□□□ 0.82
NCKIPSD-201ENST00000294129 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.2■□□□□ 0.82
NCKIPSD-201ENST00000294129 ELL2O00472 640 aaPredicted RBP20.19■□□□□ 0.82
NCKIPSD-201ENST00000294129 PDZRN3Q9UPQ7 1066 aa20.19■□□□□ 0.82
NCKIPSD-201ENST00000294129 SEC24BO95487 1268 aa20.19■□□□□ 0.82
NCKIPSD-201ENST00000294129 KIF20BQ96Q89 1820 aa20.19■□□□□ 0.82
NCKIPSD-201ENST00000294129 RSPH6AQ9H0K4 717 aa20.18■□□□□ 0.82
NCKIPSD-201ENST00000294129 ANKRD26Q9UPS8 1709 aa20.18■□□□□ 0.82
NCKIPSD-201ENST00000294129 FCHSD2O94868 740 aa20.18■□□□□ 0.82
NCKIPSD-201ENST00000294129 PNNQ9H307 717 aaKnown RBP20.18■□□□□ 0.82
NCKIPSD-201ENST00000294129 COG3Q96JB2 828 aa20.17■□□□□ 0.82
NCKIPSD-201ENST00000294129 MED14O60244 1454 aa20.17■□□□□ 0.82
NCKIPSD-201ENST00000294129 RWDD1Q9H446 243 aaPredicted RBP20.16■□□□□ 0.82
NCKIPSD-201ENST00000294129 MAP2P11137 1827 aaKnown RBP20.16■□□□□ 0.82
NCKIPSD-201ENST00000294129 PNPLA6Q8IY17 1366 aa20.16■□□□□ 0.82
NCKIPSD-201ENST00000294129 SLC26A8Q96RN1 970 aa20.16■□□□□ 0.82
NCKIPSD-201ENST00000294129 CCDC61Q9Y6R9 512 aa20.16■□□□□ 0.82
NCKIPSD-201ENST00000294129 REREQ9P2R6 1566 aa20.16■□□□□ 0.82
NCKIPSD-201ENST00000294129 LRRC7Q96NW7 1537 aa20.16■□□□□ 0.82
NCKIPSD-201ENST00000294129 TNRQ92752 1358 aa20.15■□□□□ 0.82
NCKIPSD-201ENST00000294129 ATF7IPQ6VMQ6 1270 aa20.15■□□□□ 0.82
NCKIPSD-201ENST00000294129 TMEM57Q8N5G2 664 aa20.14■□□□□ 0.82
NCKIPSD-201ENST00000294129 HDGFP51858 240 aaKnown RBP20.14■□□□□ 0.81
NCKIPSD-201ENST00000294129 ATP7BP35670 1465 aa20.14■□□□□ 0.81
NCKIPSD-201ENST00000294129 SETD1AO15047 1707 aaKnown RBP20.13■□□□□ 0.81
NCKIPSD-201ENST00000294129 DLC1Q96QB1 1528 aa20.13■□□□□ 0.81
NCKIPSD-201ENST00000294129 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
NCKIPSD-201ENST00000294129 PRR36Q9H6K5 1346 aa20.12■□□□□ 0.81
NCKIPSD-201ENST00000294129 DCTN1Q14203 1278 aa20.12■□□□□ 0.81
NCKIPSD-201ENST00000294129 FAM83GA6ND36 823 aa20.11■□□□□ 0.81
NCKIPSD-201ENST00000294129 CT47B1P0C2W7 299 aaPredicted RBP20.11■□□□□ 0.81
NCKIPSD-201ENST00000294129 NFE2L2Q16236 605 aa20.11■□□□□ 0.81
NCKIPSD-201ENST00000294129 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
NCKIPSD-201ENST00000294129 EDC4Q6P2E9 1401 aaKnown RBP20.11■□□□□ 0.81
NCKIPSD-201ENST00000294129 IL16Q14005 1332 aa20.1■□□□□ 0.81
NCKIPSD-201ENST00000294129 LTKP29376 864 aa20.1■□□□□ 0.81
NCKIPSD-201ENST00000294129 IL13P35225 146 aa20.1■□□□□ 0.81
NCKIPSD-201ENST00000294129 KIF13AQ9H1H9 1805 aa20.1■□□□□ 0.81
NCKIPSD-201ENST00000294129 ROBO2Q9HCK4 1378 aa20.1■□□□□ 0.81
NCKIPSD-201ENST00000294129 TSPYL6Q8N831 410 aa20.1■□□□□ 0.81
NCKIPSD-201ENST00000294129 DDX19BQ9UMR2 479 aa20.1■□□□□ 0.81
NCKIPSD-201ENST00000294129 CPS1P31327 1500 aa20.09■□□□□ 0.81
NCKIPSD-201ENST00000294129 CPSF1Q10570 1443 aaKnown RBP20.09■□□□□ 0.81
NCKIPSD-201ENST00000294129 FAM135BQ49AJ0 1406 aa20.09■□□□□ 0.81
NCKIPSD-201ENST00000294129 TMEM2Q9UHN6 1383 aa20.08■□□□□ 0.81
NCKIPSD-201ENST00000294129 AAMPQ13685 434 aa20.07■□□□□ 0.8
NCKIPSD-201ENST00000294129 AEBP1Q8IUX7 1158 aa20.07■□□□□ 0.8
NCKIPSD-201ENST00000294129 IPO8O15397 1037 aaKnown RBP20.07■□□□□ 0.8
NCKIPSD-201ENST00000294129 USP19O94966 1318 aa20.06■□□□□ 0.8
NCKIPSD-201ENST00000294129 KIF16BQ96L93 1317 aa20.06■□□□□ 0.8
NCKIPSD-201ENST00000294129 C1orf115Q9H7X2 142 aa20.06■□□□□ 0.8
NCKIPSD-201ENST00000294129 MBIPQ9NS73 344 aa20.05■□□□□ 0.8
NCKIPSD-201ENST00000294129 ACEP12821 1306 aa20.05■□□□□ 0.8
NCKIPSD-201ENST00000294129 SULT6B1Q6IMI4 303 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms