RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 CENPHQ9H3R5 247 aa19.29■□□□□ 0.68
SSRP1-202ENST00000293880 PDZRN3Q9UPQ7 1066 aa19.29■□□□□ 0.68
SSRP1-202ENST00000293880 NEK4P51957 841 aa19.29■□□□□ 0.68
SSRP1-202ENST00000293880 UQCRHLA0A096LP55 91 aa19.28■□□□□ 0.68
SSRP1-202ENST00000293880 UQCRHP07919 91 aa19.28■□□□□ 0.68
SSRP1-202ENST00000293880 TRERF1Q96PN7 1200 aa19.28■□□□□ 0.68
SSRP1-202ENST00000293880 DCTN1Q14203 1278 aa19.28■□□□□ 0.68
SSRP1-202ENST00000293880 TMEM132AQ24JP5 1023 aa19.27■□□□□ 0.68
SSRP1-202ENST00000293880 KIF7Q2M1P5 1343 aa19.27■□□□□ 0.68
SSRP1-202ENST00000293880 UACAQ9BZF9 1416 aa19.27■□□□□ 0.68
SSRP1-202ENST00000293880 RSPH4AQ5TD94 716 aa19.27■□□□□ 0.68
SSRP1-202ENST00000293880 CCDC173Q0VFZ6 552 aa19.27■□□□□ 0.68
SSRP1-202ENST00000293880 RAD54L2Q9Y4B4 1467 aa19.27■□□□□ 0.67
SSRP1-202ENST00000293880 ADAMTS8Q9UP79 889 aa19.26■□□□□ 0.67
SSRP1-202ENST00000293880 MAGEC2Q9UBF1 373 aaPredicted RBP19.26■□□□□ 0.67
SSRP1-202ENST00000293880 PSMA5P28066 241 aa19.26■□□□□ 0.67
SSRP1-202ENST00000293880 GPATCH11Q8N954 259 aa19.25■□□□□ 0.67
SSRP1-202ENST00000293880 NOB1Q9ULX3 412 aaKnown RBP19.25■□□□□ 0.67
SSRP1-202ENST00000293880 ANKRD62A6NC57 917 aa19.25■□□□□ 0.67
SSRP1-202ENST00000293880 SERPINC1P01008 464 aa19.25■□□□□ 0.67
SSRP1-202ENST00000293880 ERCC4Q92889 916 aaPredicted RBP19.25■□□□□ 0.67
SSRP1-202ENST00000293880 GNAI1P63096 354 aa19.25■□□□□ 0.67
SSRP1-202ENST00000293880 KINO60870 393 aaKnown RBP19.24■□□□□ 0.67
SSRP1-202ENST00000293880 AKNAQ7Z591 1439 aa19.24■□□□□ 0.67
SSRP1-202ENST00000293880 LETM1O95202 739 aaPredicted RBP19.24■□□□□ 0.67
SSRP1-202ENST00000293880 AQRO60306 1485 aaKnown RBP eCLIP19.24■□□□□ 0.678e-8■■■■■ 33.8
SSRP1-202ENST00000293880 CDK5RAP3Q96JB5 506 aa19.24■□□□□ 0.67
SSRP1-202ENST00000293880 MTERF4Q7Z6M4 381 aaKnown RBP19.24■□□□□ 0.67
SSRP1-202ENST00000293880 TNNT1P13805 278 aa19.23■□□□□ 0.67
SSRP1-202ENST00000293880 CCDC7Q96M83 1385 aa19.23■□□□□ 0.67
SSRP1-202ENST00000293880 CNTLNQ9NXG0 1405 aa19.23■□□□□ 0.67
SSRP1-202ENST00000293880 SMARCE1Q969G3 411 aa19.23■□□□□ 0.67
SSRP1-202ENST00000293880 SURF6O75683 361 aaKnown RBP19.22■□□□□ 0.67
SSRP1-202ENST00000293880 BCAR3O75815 825 aa19.22■□□□□ 0.67
SSRP1-202ENST00000293880 SIL1Q9H173 461 aa19.22■□□□□ 0.67
SSRP1-202ENST00000293880 DYDC1Q8WWB3 177 aa19.22■□□□□ 0.67
SSRP1-202ENST00000293880 TSR2Q969E8 191 aaKnown RBP19.22■□□□□ 0.67
SSRP1-202ENST00000293880 CT47B1P0C2W7 299 aaPredicted RBP19.21■□□□□ 0.67
SSRP1-202ENST00000293880 GAPVD1Q14C86 1478 aa19.21■□□□□ 0.67
SSRP1-202ENST00000293880 VGFO15240 615 aaPredicted RBP19.21■□□□□ 0.67
SSRP1-202ENST00000293880 TAF3Q5VWG9 929 aa19.21■□□□□ 0.67
SSRP1-202ENST00000293880 KRT18P05783 430 aaKnown RBP19.21■□□□□ 0.67
SSRP1-202ENST00000293880 NEFHP12036 1026 aa19.21■□□□□ 0.67
SSRP1-202ENST00000293880 XBP1P17861 261 aa19.21■□□□□ 0.67
SSRP1-202ENST00000293880 ENOX2Q16206 610 aaKnown RBP19.21■□□□□ 0.67
SSRP1-202ENST00000293880 TTC39AQ5SRH9 613 aa19.21■□□□□ 0.67
SSRP1-202ENST00000293880 HSP90AB4PQ58FF6 505 aa19.2■□□□□ 0.66
SSRP1-202ENST00000293880 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
SSRP1-202ENST00000293880 ZHX3Q9H4I2 956 aa19.2■□□□□ 0.66
SSRP1-202ENST00000293880 STK38Q15208 465 aa19.2■□□□□ 0.66
SSRP1-202ENST00000293880 FILIP1LQ4L180 1135 aa19.2■□□□□ 0.66
SSRP1-202ENST00000293880 TICAM2Q86XR7 235 aa19.2■□□□□ 0.66
SSRP1-202ENST00000293880 TMEM132EQ6IEE7 984 aa19.19■□□□□ 0.66
SSRP1-202ENST00000293880 TANGO6Q9C0B7 1094 aa19.19■□□□□ 0.66
SSRP1-202ENST00000293880 TNMDQ9H2S6 317 aa19.19■□□□□ 0.66
SSRP1-202ENST00000293880 PRDM2Q13029 1718 aa19.19■□□□□ 0.66
SSRP1-202ENST00000293880 SPINK5Q9NQ38 1064 aaPredicted RBP19.19■□□□□ 0.66
SSRP1-202ENST00000293880 EXOSC9Q06265 439 aaKnown RBP19.19■□□□□ 0.66
SSRP1-202ENST00000293880 GRPEL1Q9HAV7 217 aa19.19■□□□□ 0.66
SSRP1-202ENST00000293880 FGD5Q6ZNL6 1462 aa19.18■□□□□ 0.66
SSRP1-202ENST00000293880 KIAA0754O94854 1291 aa19.18■□□□□ 0.66
SSRP1-202ENST00000293880 ATP2B2Q01814 1243 aa19.18■□□□□ 0.66
SSRP1-202ENST00000293880 IPO4Q8TEX9 1081 aaKnown RBP19.18■□□□□ 0.66
SSRP1-202ENST00000293880 TAX1BP1Q86VP1 789 aa19.17■□□□□ 0.66
SSRP1-202ENST00000293880 MYO6Q9UM54 1294 aa19.17■□□□□ 0.66
SSRP1-202ENST00000293880 CBX1P83916 185 aa19.17■□□□□ 0.66
SSRP1-202ENST00000293880 PIBF1Q8WXW3 757 aa19.17■□□□□ 0.66
SSRP1-202ENST00000293880 PHF23Q9BUL5 403 aaPredicted RBP19.17■□□□□ 0.66
SSRP1-202ENST00000293880 CCDC181Q5TID7 509 aa19.16■□□□□ 0.66
SSRP1-202ENST00000293880 TMX1Q9H3N1 280 aa19.16■□□□□ 0.66
SSRP1-202ENST00000293880 SEPT11Q9NVA2 429 aaKnown RBP19.16■□□□□ 0.66
SSRP1-202ENST00000293880 SYCP1Q15431 976 aa19.16■□□□□ 0.66
SSRP1-202ENST00000293880 ZNF396Q96N95 335 aaPredicted RBP19.16■□□□□ 0.66
SSRP1-202ENST00000293880 DEF6Q9H4E7 631 aa19.16■□□□□ 0.66
SSRP1-202ENST00000293880 NLRP2Q9NX02 1062 aa19.16■□□□□ 0.66
SSRP1-202ENST00000293880 ZHX1Q9UKY1 873 aaPredicted RBP19.15■□□□□ 0.66
SSRP1-202ENST00000293880 CAMK4Q16566 473 aa19.15■□□□□ 0.66
SSRP1-202ENST00000293880 ME1P48163 572 aa19.14■□□□□ 0.66
SSRP1-202ENST00000293880 MTHFSP49914 203 aa19.14■□□□□ 0.65
SSRP1-202ENST00000293880 NUP133Q8WUM0 1156 aa19.14■□□□□ 0.65
SSRP1-202ENST00000293880 CCP110O43303 1012 aa19.13■□□□□ 0.65
SSRP1-202ENST00000293880 RAPGEF4Q8WZA2 1011 aa19.13■□□□□ 0.65
SSRP1-202ENST00000293880 GOLGA6L10A6NI86 522 aa19.13■□□□□ 0.65
SSRP1-202ENST00000293880 PPFIBP1Q86W92 1011 aa19.13■□□□□ 0.65
SSRP1-202ENST00000293880 GIMAP7Q8NHV1 300 aa19.13■□□□□ 0.65
SSRP1-202ENST00000293880 CCAR1Q8IX12 1150 aaKnown RBP19.13■□□□□ 0.65
SSRP1-202ENST00000293880 CCDC112Q8NEF3 446 aa19.13■□□□□ 0.65
SSRP1-202ENST00000293880 RBM42Q9BTD8 480 aaKnown RBP19.13■□□□□ 0.65
SSRP1-202ENST00000293880 SART3Q15020 963 aaKnown RBP19.13■□□□□ 0.65
SSRP1-202ENST00000293880 TBC1D2BQ9UPU7 963 aa19.13■□□□□ 0.65
SSRP1-202ENST00000293880 SEPT7Q16181 437 aaKnown RBP19.12■□□□□ 0.65
SSRP1-202ENST00000293880 WASHC2AQ641Q2 1341 aa19.12■□□□□ 0.65
SSRP1-202ENST00000293880 MBD3O95983 291 aa19.12■□□□□ 0.65
SSRP1-202ENST00000293880 CCDC192P0DO97 292 aa19.12■□□□□ 0.65
SSRP1-202ENST00000293880 PAF1Q8N7H5 531 aa19.12■□□□□ 0.65
SSRP1-202ENST00000293880 K7ELQ4 463 aaPredicted RBP19.11■□□□□ 0.65
SSRP1-202ENST00000293880 TCP11L2Q8N4U5 519 aa19.11■□□□□ 0.65
SSRP1-202ENST00000293880 CLASRPQ8N2M8 674 aaKnown RBP19.11■□□□□ 0.65
SSRP1-202ENST00000293880 ZNF644Q9H582 1327 aaPredicted RBP19.11■□□□□ 0.65
SSRP1-202ENST00000293880 RABEP1Q15276 862 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 363.3 ms