RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 ZNF692Q9BU19 519 aaPredicted RBP27.77■■■□□ 2.04
TIMP4-201ENST00000287814 SSH2Q76I76 1423 aa27.77■■■□□ 2.04
TIMP4-201ENST00000287814 ADAMTS2O95450 1211 aa27.76■■■□□ 2.03
TIMP4-201ENST00000287814 C11orf95C9JLR9 678 aaPredicted RBP27.75■■■□□ 2.03
TIMP4-201ENST00000287814 CDCA8Q53HL2 280 aa27.75■■■□□ 2.03
TIMP4-201ENST00000287814 NUTM2GQ5VZR2 741 aa27.75■■■□□ 2.03
TIMP4-201ENST00000287814 MEX3CQ5U5Q3 659 aaKnown RBP27.74■■■□□ 2.03
TIMP4-201ENST00000287814 KTN1Q86UP2 1357 aaKnown RBP27.73■■■□□ 2.03
TIMP4-201ENST00000287814 RGS17Q9UGC6 210 aaPredicted RBP27.73■■■□□ 2.03
TIMP4-201ENST00000287814 AKAP12Q02952 1782 aa27.72■■■□□ 2.03
TIMP4-201ENST00000287814 BRD4O60885 1362 aaPredicted RBP27.72■■■□□ 2.03
TIMP4-201ENST00000287814 ABTB2Q8N961 1025 aa27.72■■■□□ 2.03
TIMP4-201ENST00000287814 A0A1W2PP64 1363 aa27.71■■■□□ 2.03
TIMP4-201ENST00000287814 TTC21BQ7Z4L5 1316 aa27.71■■■□□ 2.03
TIMP4-201ENST00000287814 NINLQ9Y2I6 1382 aa27.7■■■□□ 2.03
TIMP4-201ENST00000287814 HDGFL2Q7Z4V5 671 aaPredicted RBP27.7■■■□□ 2.02
TIMP4-201ENST00000287814 PHF23Q9BUL5 403 aaPredicted RBP27.7■■■□□ 2.02
TIMP4-201ENST00000287814 TERF2IPQ9NYB0 399 aa27.69■■■□□ 2.02
TIMP4-201ENST00000287814 C8orf37Q96NL8 207 aa27.68■■■□□ 2.02
TIMP4-201ENST00000287814 POLR3GLQ9BT43 218 aa27.68■■■□□ 2.02
TIMP4-201ENST00000287814 MON2Q7Z3U7 1717 aa27.66■■■□□ 2.02
TIMP4-201ENST00000287814 HAP1P54257 671 aaPredicted RBP27.65■■■□□ 2.02
TIMP4-201ENST00000287814 NRKQ7Z2Y5 1582 aa27.65■■■□□ 2.02
TIMP4-201ENST00000287814 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.65■■■□□ 2.02
TIMP4-201ENST00000287814 ANKRD36BQ8N2N9 1353 aa27.64■■■□□ 2.02
TIMP4-201ENST00000287814 ABCA3Q99758 1704 aa27.64■■■□□ 2.01
TIMP4-201ENST00000287814 NLRP6P59044 892 aa27.63■■■□□ 2.01
TIMP4-201ENST00000287814 NGLY1Q96IV0 654 aa27.63■■■□□ 2.01
TIMP4-201ENST00000287814 TTC21AQ8NDW8 1320 aa27.63■■■□□ 2.01
TIMP4-201ENST00000287814 CRYBG1Q9Y4K1 1723 aa27.62■■■□□ 2.01
TIMP4-201ENST00000287814 NLRP13Q86W25 1043 aa27.62■■■□□ 2.01
TIMP4-201ENST00000287814 ZRANB1Q9UGI0 708 aa27.62■■■□□ 2.01
TIMP4-201ENST00000287814 AFF2P51816 1311 aa27.62■■■□□ 2.01
TIMP4-201ENST00000287814 MYOM1P52179 1685 aa27.62■■■□□ 2.01
TIMP4-201ENST00000287814 EDC4Q6P2E9 1401 aaKnown RBP27.62■■■□□ 2.01
TIMP4-201ENST00000287814 PIK3C2AO00443 1686 aa27.62■■■□□ 2.01
TIMP4-201ENST00000287814 USP19O94966 1318 aa27.61■■■□□ 2.01
TIMP4-201ENST00000287814 NME9Q86XW9 330 aa27.61■■■□□ 2.01
TIMP4-201ENST00000287814 POTEAQ6S8J7 498 aa27.59■■■□□ 2.01
TIMP4-201ENST00000287814 CARD14Q9BXL6 1004 aa27.59■■■□□ 2.01
TIMP4-201ENST00000287814 KIF7Q2M1P5 1343 aa27.58■■■□□ 2.01
TIMP4-201ENST00000287814 FAM83GA6ND36 823 aa27.58■■■□□ 2.01
TIMP4-201ENST00000287814 FNBP4Q8N3X1 1017 aaPredicted RBP27.58■■■□□ 2.01
TIMP4-201ENST00000287814 GCP02774 474 aa27.57■■■□□ 2
TIMP4-201ENST00000287814 MARF1Q9Y4F3 1742 aaKnown RBP27.57■■■□□ 2
TIMP4-201ENST00000287814 ZC3H6P61129 1189 aaKnown RBP27.56■■■□□ 2
TIMP4-201ENST00000287814 PHRF1Q9P1Y6 1649 aaKnown RBP27.56■■■□□ 2
TIMP4-201ENST00000287814 ZNF772Q68DY9 489 aaPredicted RBP27.54■■■□□ 2
TIMP4-201ENST00000287814 USP31Q70CQ4 1352 aa27.53■■■□□ 2
TIMP4-201ENST00000287814 KIAA0232Q92628 1395 aa27.53■■■□□ 2
TIMP4-201ENST00000287814 ZEB1P37275 1124 aaPredicted RBP27.52■■■□□ 2
TIMP4-201ENST00000287814 USP21Q9UK80 565 aa27.52■■■□□ 2
TIMP4-201ENST00000287814 SLIT3O75094 1523 aa27.52■■■□□ 2
TIMP4-201ENST00000287814 BCL9LQ86UU0 1499 aa27.52■■■□□ 2
TIMP4-201ENST00000287814 SLIT2O94813 1529 aa27.51■■□□□ 1.99
TIMP4-201ENST00000287814 CHRNA2Q15822 529 aa27.51■■□□□ 1.99
TIMP4-201ENST00000287814 ILDR2Q71H61 639 aa27.51■■□□□ 1.99
TIMP4-201ENST00000287814 WASHC2AQ641Q2 1341 aa27.5■■□□□ 1.99
TIMP4-201ENST00000287814 PANK3Q9H999 370 aa27.49■■□□□ 1.99
TIMP4-201ENST00000287814 PRDM11Q9NQV5 511 aa27.49■■□□□ 1.99
TIMP4-201ENST00000287814 FYB1O15117 783 aa27.49■■□□□ 1.99
TIMP4-201ENST00000287814 SOX12O15370 315 aa27.49■■□□□ 1.99
TIMP4-201ENST00000287814 NSD3Q9BZ95 1437 aa27.48■■□□□ 1.99
TIMP4-201ENST00000287814 QTRT2Q9H974 415 aaKnown RBP27.48■■□□□ 1.99
TIMP4-201ENST00000287814 CCDC7Q96M83 1385 aa27.48■■□□□ 1.99
TIMP4-201ENST00000287814 OVOS2A0A0J9YW53 1432 aa27.47■■□□□ 1.99
TIMP4-201ENST00000287814 OVOS2Q6IE36 1432 aa27.47■■□□□ 1.99
TIMP4-201ENST00000287814 CPDO75976 1380 aa27.46■■□□□ 1.99
TIMP4-201ENST00000287814 UNC5CLQ8IV45 518 aa27.46■■□□□ 1.99
TIMP4-201ENST00000287814 GGNBP2Q9H3C7 697 aa27.46■■□□□ 1.99
TIMP4-201ENST00000287814 BTG4Q9NY30 223 aa27.46■■□□□ 1.99
TIMP4-201ENST00000287814 KCNH5Q8NCM2 988 aa27.45■■□□□ 1.98
TIMP4-201ENST00000287814 USP54Q70EL1 1684 aa27.44■■□□□ 1.98
TIMP4-201ENST00000287814 PLCH1Q4KWH8 1693 aa27.43■■□□□ 1.98
TIMP4-201ENST00000287814 COL14A1Q05707 1796 aaKnown RBP27.43■■□□□ 1.98
TIMP4-201ENST00000287814 NFAT5O94916 1531 aa27.42■■□□□ 1.98
TIMP4-201ENST00000287814 ZBTB7CA1YPR0 619 aa27.42■■□□□ 1.98
TIMP4-201ENST00000287814 ARHGEF25Q86VW2 580 aa27.42■■□□□ 1.98
TIMP4-201ENST00000287814 COG3Q96JB2 828 aa27.42■■□□□ 1.98
TIMP4-201ENST00000287814 TRPC5Q9UL62 973 aaPredicted RBP27.42■■□□□ 1.98
TIMP4-201ENST00000287814 ATRNO75882 1429 aa27.41■■□□□ 1.98
TIMP4-201ENST00000287814 FBLN1P23142 703 aa27.4■■□□□ 1.98
TIMP4-201ENST00000287814 NWD2Q9ULI1 1742 aa27.38■■□□□ 1.97
TIMP4-201ENST00000287814 RXRBP28702 533 aa27.38■■□□□ 1.97
TIMP4-201ENST00000287814 CAMTA1Q9Y6Y1 1673 aa27.38■■□□□ 1.97
TIMP4-201ENST00000287814 AXIN2Q9Y2T1 843 aa27.37■■□□□ 1.97
TIMP4-201ENST00000287814 AATKQ6ZMQ8 1374 aa27.37■■□□□ 1.97
TIMP4-201ENST00000287814 CGNL1Q0VF96 1302 aa27.37■■□□□ 1.97
TIMP4-201ENST00000287814 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.36■■□□□ 1.97
TIMP4-201ENST00000287814 LMO7Q8WWI1 1683 aa27.36■■□□□ 1.97
TIMP4-201ENST00000287814 RBM6P78332 1123 aaKnown RBP27.36■■□□□ 1.97
TIMP4-201ENST00000287814 NRAPQ86VF7 1730 aa27.35■■□□□ 1.97
TIMP4-201ENST00000287814 VPS72Q15906 364 aa27.35■■□□□ 1.97
TIMP4-201ENST00000287814 GJD4Q96KN9 370 aaPredicted RBP27.35■■□□□ 1.97
TIMP4-201ENST00000287814 STRN4Q9NRL3 753 aa27.33■■□□□ 1.97
TIMP4-201ENST00000287814 KIF20BQ96Q89 1820 aa27.33■■□□□ 1.97
TIMP4-201ENST00000287814 COL18A1P39060 1754 aa27.33■■□□□ 1.97
TIMP4-201ENST00000287814 PER1O15534 1290 aaPredicted RBP27.33■■□□□ 1.97
TIMP4-201ENST00000287814 CCDC9Q9Y3X0 531 aaKnown RBP27.3■■□□□ 1.96
TIMP4-201ENST00000287814 KNSTRNQ9Y448 316 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms