RNA–Protein interactions for RNA: ENST00000287600.8

PDE6D-201, Transcript of phosphodiesterase 6D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6D, Length 1,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-201ENST00000287600 NRAPQ86VF7 1730 aa22.08■■□□□ 1.12
PDE6D-201ENST00000287600 SEPT12Q8IYM1 358 aa22.06■■□□□ 1.12
PDE6D-201ENST00000287600 COL14A1Q05707 1796 aaKnown RBP22.06■■□□□ 1.12
PDE6D-201ENST00000287600 BLMP54132 1417 aaPredicted RBP22.06■■□□□ 1.12
PDE6D-201ENST00000287600 ZRANB1Q9UGI0 708 aa22.05■■□□□ 1.12
PDE6D-201ENST00000287600 CRYBG1Q9Y4K1 1723 aa22.05■■□□□ 1.12
PDE6D-201ENST00000287600 ATP7BP35670 1465 aa22.04■■□□□ 1.12
PDE6D-201ENST00000287600 NGDNQ8NEJ9 315 aaKnown RBP22.04■■□□□ 1.12
PDE6D-201ENST00000287600 FAM83GA6ND36 823 aa22.03■■□□□ 1.12
PDE6D-201ENST00000287600 KIAA1210Q9ULL0 1709 aa22.03■■□□□ 1.12
PDE6D-201ENST00000287600 A0A0G2JS52 829 aa22.02■■□□□ 1.12
PDE6D-201ENST00000287600 PAK3O75914 559 aaPredicted RBP22.02■■□□□ 1.12
PDE6D-201ENST00000287600 MYT1Q01538 1121 aa22.02■■□□□ 1.12
PDE6D-201ENST00000287600 KCNA4P22459 653 aa22.01■■□□□ 1.11
PDE6D-201ENST00000287600 BTG4Q9NY30 223 aa22■■□□□ 1.11
PDE6D-201ENST00000287600 TOPAZ1Q8N9V7 1692 aa22■■□□□ 1.11
PDE6D-201ENST00000287600 SF3B2Q13435 895 aaKnown RBP21.99■■□□□ 1.11
PDE6D-201ENST00000287600 PHRF1Q9P1Y6 1649 aaKnown RBP21.98■■□□□ 1.11
PDE6D-201ENST00000287600 KRT27Q7Z3Y8 459 aa21.98■■□□□ 1.11
PDE6D-201ENST00000287600 NUDT16Q96DE0 195 aaKnown RBP21.98■■□□□ 1.11
PDE6D-201ENST00000287600 SIN3AQ96ST3 1273 aa21.98■■□□□ 1.11
PDE6D-201ENST00000287600 PCGF6Q9BYE7 350 aa21.98■■□□□ 1.11
PDE6D-201ENST00000287600 ONECUT3O60422 494 aaPredicted RBP21.97■■□□□ 1.11
PDE6D-201ENST00000287600 NEUROD1Q13562 356 aa21.95■■□□□ 1.1
PDE6D-201ENST00000287600 FAM98CQ17RN3 349 aaKnown RBP21.95■■□□□ 1.1
PDE6D-201ENST00000287600 PRDM11Q9NQV5 511 aa21.95■■□□□ 1.1
PDE6D-201ENST00000287600 DEFB132Q7Z7B7 95 aa21.94■■□□□ 1.1
PDE6D-201ENST00000287600 CDK19Q9BWU1 502 aa21.94■■□□□ 1.1
PDE6D-201ENST00000287600 THSD7AQ9UPZ6 1657 aa21.91■■□□□ 1.1
PDE6D-201ENST00000287600 POLR3AO14802 1390 aaPredicted RBP21.9■■□□□ 1.1
PDE6D-201ENST00000287600 KIAA0232Q92628 1395 aa21.9■■□□□ 1.1
PDE6D-201ENST00000287600 SPATA31A5Q5VU36 1347 aa21.9■■□□□ 1.1
PDE6D-201ENST00000287600 SPATA31A7Q8IWB4 1347 aa21.9■■□□□ 1.1
PDE6D-201ENST00000287600 HOXD11P31277 338 aaPredicted RBP21.9■■□□□ 1.1
PDE6D-201ENST00000287600 RNF216Q9NWF9 866 aaPredicted RBP21.9■■□□□ 1.1
PDE6D-201ENST00000287600 RGPD1P0DJD0 1748 aa21.89■■□□□ 1.1
PDE6D-201ENST00000287600 QRICH2Q9H0J4 1663 aa21.88■■□□□ 1.09
PDE6D-201ENST00000287600 ACEP12821 1306 aa21.88■■□□□ 1.09
PDE6D-201ENST00000287600 NRKQ7Z2Y5 1582 aa21.88■■□□□ 1.09
PDE6D-201ENST00000287600 NBPF1Q3BBV0 1214 aa21.88■■□□□ 1.09
PDE6D-201ENST00000287600 NUTM2GQ5VZR2 741 aa21.88■■□□□ 1.09
PDE6D-201ENST00000287600 L3MBTL2Q969R5 705 aa21.88■■□□□ 1.09
PDE6D-201ENST00000287600 CCDC61Q9Y6R9 512 aa21.88■■□□□ 1.09
PDE6D-201ENST00000287600 CHRNA2Q15822 529 aa21.87■■□□□ 1.09
PDE6D-201ENST00000287600 NPM3O75607 178 aaKnown RBP21.86■■□□□ 1.09
PDE6D-201ENST00000287600 CENPJQ9HC77 1338 aaPredicted RBP21.85■■□□□ 1.09
PDE6D-201ENST00000287600 BAG6P46379 1132 aa21.85■■□□□ 1.09
PDE6D-201ENST00000287600 ZC3H6P61129 1189 aaKnown RBP21.85■■□□□ 1.09
PDE6D-201ENST00000287600 SRPK2P78362 688 aaKnown RBP21.85■■□□□ 1.09
PDE6D-201ENST00000287600 NBPF8Q3BBV2 869 aa21.85■■□□□ 1.09
PDE6D-201ENST00000287600 STRN4Q9NRL3 753 aa21.85■■□□□ 1.09
PDE6D-201ENST00000287600 PPIP5K1Q6PFW1 1433 aa21.84■■□□□ 1.09
PDE6D-201ENST00000287600 PLEKHG3A1L390 1219 aa21.84■■□□□ 1.09
PDE6D-201ENST00000287600 FAM182BQ5T319 152 aa21.83■■□□□ 1.09
PDE6D-201ENST00000287600 TNS1Q9HBL0 1735 aaKnown RBP21.83■■□□□ 1.08
PDE6D-201ENST00000287600 SPATA31A1Q5TZJ5 1347 aa21.82■■□□□ 1.08
PDE6D-201ENST00000287600 ABTB2Q8N961 1025 aa21.82■■□□□ 1.08
PDE6D-201ENST00000287600 SRCAPQ6ZRS2 3230 aa21.82■■□□□ 1.08
PDE6D-201ENST00000287600 SSH2Q76I76 1423 aa21.8■■□□□ 1.08
PDE6D-201ENST00000287600 LMO7Q8WWI1 1683 aa21.79■■□□□ 1.08
PDE6D-201ENST00000287600 CABP2Q9NPB3 220 aa21.79■■□□□ 1.08
PDE6D-201ENST00000287600 LRP5O75197 1615 aa21.78■■□□□ 1.08
PDE6D-201ENST00000287600 TRPM1Q7Z4N2 1603 aa21.78■■□□□ 1.08
PDE6D-201ENST00000287600 EVA1CP58658 441 aa21.78■■□□□ 1.08
PDE6D-201ENST00000287600 USP35Q9P2H5 1018 aa21.78■■□□□ 1.08
PDE6D-201ENST00000287600 USP19O94966 1318 aa21.78■■□□□ 1.08
PDE6D-201ENST00000287600 CAMTA1Q9Y6Y1 1673 aa21.77■■□□□ 1.08
PDE6D-201ENST00000287600 CPDO75976 1380 aa21.76■■□□□ 1.07
PDE6D-201ENST00000287600 EN1Q05925 392 aaPredicted RBP21.76■■□□□ 1.07
PDE6D-201ENST00000287600 TONSLQ96HA7 1378 aa21.75■■□□□ 1.07
PDE6D-201ENST00000287600 PSDA5PKW4 1024 aaPredicted RBP21.75■■□□□ 1.07
PDE6D-201ENST00000287600 NLRP13Q86W25 1043 aa21.75■■□□□ 1.07
PDE6D-201ENST00000287600 BRD4O60885 1362 aaPredicted RBP21.74■■□□□ 1.07
PDE6D-201ENST00000287600 DISP2A7MBM2 1401 aa21.74■■□□□ 1.07
PDE6D-201ENST00000287600 USP6P35125 1406 aa21.74■■□□□ 1.07
PDE6D-201ENST00000287600 GCP02774 474 aa21.72■■□□□ 1.07
PDE6D-201ENST00000287600 LARP1Q6PKG0 1096 aaKnown RBP21.72■■□□□ 1.07
PDE6D-201ENST00000287600 FAM196AQ6ZSG2 479 aa21.72■■□□□ 1.07
PDE6D-201ENST00000287600 BARGINQ6ZT62 677 aa21.72■■□□□ 1.07
PDE6D-201ENST00000287600 COL5A2P05997 1499 aaPredicted RBP21.71■■□□□ 1.07
PDE6D-201ENST00000287600 CABP1Q9NZU7 370 aa21.71■■□□□ 1.07
PDE6D-201ENST00000287600 PIK3C2AO00443 1686 aa21.71■■□□□ 1.07
PDE6D-201ENST00000287600 ROCK2O75116 1388 aaKnown RBP21.71■■□□□ 1.07
PDE6D-201ENST00000287600 ZBTB7CA1YPR0 619 aa21.7■■□□□ 1.06
PDE6D-201ENST00000287600 DCAF8L1A6NGE4 600 aa21.7■■□□□ 1.06
PDE6D-201ENST00000287600 TRIM37O94972 964 aa21.7■■□□□ 1.06
PDE6D-201ENST00000287600 PDE3BQ13370 1112 aa21.7■■□□□ 1.06
PDE6D-201ENST00000287600 TCP11L2Q8N4U5 519 aa21.7■■□□□ 1.06
PDE6D-201ENST00000287600 EVC2Q86UK5 1308 aa21.7■■□□□ 1.06
PDE6D-201ENST00000287600 SLIT3O75094 1523 aa21.7■■□□□ 1.06
PDE6D-201ENST00000287600 PARP4Q9UKK3 1724 aaKnown RBP21.69■■□□□ 1.06
PDE6D-201ENST00000287600 NLRP6P59044 892 aa21.68■■□□□ 1.06
PDE6D-201ENST00000287600 EZH2Q15910 746 aaKnown RBP21.68■■□□□ 1.06
PDE6D-201ENST00000287600 AKAP12Q02952 1782 aa21.66■■□□□ 1.06
PDE6D-201ENST00000287600 CRB1P82279 1406 aa21.66■■□□□ 1.06
PDE6D-201ENST00000287600 THRAP3Q9Y2W1 955 aaKnown RBP21.66■■□□□ 1.06
PDE6D-201ENST00000287600 APBA3O96018 575 aa21.65■■□□□ 1.06
PDE6D-201ENST00000287600 R3HDM1Q15032 1099 aaKnown RBP21.65■■□□□ 1.06
PDE6D-201ENST00000287600 CCER1Q8TC90 406 aaPredicted RBP21.65■■□□□ 1.06
PDE6D-201ENST00000287600 RREB1Q92766 1687 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms