RNA–Protein interactions for RNA: ENST00000283131.3

SMARCA5-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCA5, Length 7,923 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-201ENST00000283131 ZWINTO95229 277 aa15.65■□□□□ 0.1
SMARCA5-201ENST00000283131 PSME1Q06323 249 aa15.65■□□□□ 0.1
SMARCA5-201ENST00000283131 BAZ1BQ9UIG0 1483 aaKnown RBP15.64■□□□□ 0.09
SMARCA5-201ENST00000283131 NUTM2DQ5VT03 806 aaPredicted RBP15.64■□□□□ 0.09
SMARCA5-201ENST00000283131 CCDC175P0C221 793 aa15.63■□□□□ 0.09
SMARCA5-201ENST00000283131 RNF214Q8ND24 703 aa15.63■□□□□ 0.09
SMARCA5-201ENST00000283131 PABPN1LA6NDY0 278 aaKnown RBP15.63■□□□□ 0.09
SMARCA5-201ENST00000283131 TAF4BQ92750 862 aa15.63■□□□□ 0.09
SMARCA5-201ENST00000283131 WASHC2CQ9Y4E1 1318 aa15.63■□□□□ 0.09
SMARCA5-201ENST00000283131 STK38Q15208 465 aa15.63■□□□□ 0.09
SMARCA5-201ENST00000283131 SOGA3Q5TF21 947 aa15.62■□□□□ 0.09
SMARCA5-201ENST00000283131 SF3B2Q13435 895 aaKnown RBP15.62■□□□□ 0.09
SMARCA5-201ENST00000283131 PUS7Q96PZ0 661 aaKnown RBP15.62■□□□□ 0.09
SMARCA5-201ENST00000283131 TSPY26PQ9H489 355 aa15.62■□□□□ 0.09
SMARCA5-201ENST00000283131 GNL3LQ9NVN8 582 aaKnown RBP15.62■□□□□ 0.09
SMARCA5-201ENST00000283131 WDR70Q9NW82 654 aa15.62■□□□□ 0.09
SMARCA5-201ENST00000283131 NUP155O75694 1391 aa15.62■□□□□ 0.09
SMARCA5-201ENST00000283131 CCDC113Q9H0I3 377 aa15.61■□□□□ 0.09
SMARCA5-201ENST00000283131 TRIM22Q8IYM9 498 aa15.61■□□□□ 0.09
SMARCA5-201ENST00000283131 KIAA1328Q86T90 577 aa15.61■□□□□ 0.09
SMARCA5-201ENST00000283131 FAM177A1Q8N128 213 aaPredicted RBP15.61■□□□□ 0.09
SMARCA5-201ENST00000283131 MBD3O95983 291 aa15.61■□□□□ 0.09
SMARCA5-201ENST00000283131 HOOK3Q86VS8 718 aa15.61■□□□□ 0.09
SMARCA5-201ENST00000283131 COG6Q9Y2V7 657 aa15.61■□□□□ 0.09
SMARCA5-201ENST00000283131 BMS1Q14692 1282 aaKnown RBP15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 FOXD1Q16676 465 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 CAVIN1Q6NZI2 390 aaKnown RBP15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 SPC24Q8NBT2 197 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 CCDC102AQ96A19 550 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 FSD1Q9BTV5 496 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 MRE11P49959 708 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 RAPGEF4Q8WZA2 1011 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 HIP1O00291 1037 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 KIF6Q6ZMV9 814 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 TRAK1Q9UPV9 953 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 CBFA2T2O43439 604 aa15.6■□□□□ 0.09
SMARCA5-201ENST00000283131 FERP16591 822 aa15.59■□□□□ 0.09
SMARCA5-201ENST00000283131 AIMP1Q12904 312 aaKnown RBP15.59■□□□□ 0.09
SMARCA5-201ENST00000283131 TICAM2Q86XR7 235 aa15.59■□□□□ 0.09
SMARCA5-201ENST00000283131 PSMD1Q99460 953 aa15.59■□□□□ 0.09
SMARCA5-201ENST00000283131 KIF15Q9NS87 1388 aa15.59■□□□□ 0.09
SMARCA5-201ENST00000283131 PPP1R12BO60237 982 aaPredicted RBP15.59■□□□□ 0.09
SMARCA5-201ENST00000283131 SMC1AQ14683 1233 aaKnown RBP15.59■□□□□ 0.09
SMARCA5-201ENST00000283131 DRC1Q96MC2 740 aa15.59■□□□□ 0.09
SMARCA5-201ENST00000283131 ZNF76P36508 570 aa15.58■□□□□ 0.09
SMARCA5-201ENST00000283131 ZNF397Q8NF99 534 aaPredicted RBP15.58■□□□□ 0.09
SMARCA5-201ENST00000283131 GSTTP1A0A1W2PQM5 241 aa15.58■□□□□ 0.08
SMARCA5-201ENST00000283131 SHTN1A0MZ66 631 aa15.58■□□□□ 0.08
SMARCA5-201ENST00000283131 WDHD1O75717 1129 aaPredicted RBP15.58■□□□□ 0.08
SMARCA5-201ENST00000283131 SSBP05455 408 aaKnown RBP eCLIP15.58■□□□□ 0.08
SMARCA5-201ENST00000283131 ARHGAP35Q9NRY4 1499 aa15.58■□□□□ 0.08
SMARCA5-201ENST00000283131 GIGYF2Q6Y7W6 1299 aaKnown RBP15.58■□□□□ 0.08
SMARCA5-201ENST00000283131 SSX2IPQ9Y2D8 614 aa15.58■□□□□ 0.08
SMARCA5-201ENST00000283131 SETD5Q9C0A6 1442 aa15.58■□□□□ 0.08
SMARCA5-201ENST00000283131 RBM5P52756 815 aaKnown RBP eCLIP15.58■□□□□ 0.08
SMARCA5-201ENST00000283131 EVC2Q86UK5 1308 aa15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 UBE4AQ14139 1066 aa15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 DZIP1LQ8IYY4 767 aaKnown RBP15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 CRACR2AQ9BSW2 395 aa15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 TSPYL4Q9UJ04 414 aa15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 CEBPZQ03701 1054 aaKnown RBP15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 EFCAB2Q5VUJ9 269 aa15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 UBTFL1P0CB47 393 aaPredicted RBP15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 CCDC148Q8NFR7 591 aa15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 NOL7Q9UMY1 257 aaKnown RBP15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 GCOM1H8Y6P7 765 aaPredicted RBP15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 MYZAPP0CAP1 466 aa15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 CCDC57Q2TAC2 916 aa15.57■□□□□ 0.08
SMARCA5-201ENST00000283131 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.57■□□□□ 0.085e-10■□□□□ 8.6
SMARCA5-201ENST00000283131 CEP164Q9UPV0 1460 aa15.56■□□□□ 0.08
SMARCA5-201ENST00000283131 PPP4R3AQ6IN85 833 aa15.56■□□□□ 0.08
SMARCA5-201ENST00000283131 CRBNQ96SW2 442 aa15.56■□□□□ 0.08
SMARCA5-201ENST00000283131 TMCO3Q6UWJ1 677 aa15.56■□□□□ 0.08
SMARCA5-201ENST00000283131 C22orf23Q9BZE7 217 aa15.56■□□□□ 0.08
SMARCA5-201ENST00000283131 NFKBIBQ15653 356 aa15.55■□□□□ 0.08
SMARCA5-201ENST00000283131 CCDC69A6NI79 296 aa15.55■□□□□ 0.08
SMARCA5-201ENST00000283131 MCM2P49736 904 aa15.55■□□□□ 0.08
SMARCA5-201ENST00000283131 SCLT1Q96NL6 688 aa15.55■□□□□ 0.08
SMARCA5-201ENST00000283131 CCDC192P0DO97 292 aa15.55■□□□□ 0.08
SMARCA5-201ENST00000283131 CCDC150Q8NCX0 1101 aa15.55■□□□□ 0.08
SMARCA5-201ENST00000283131 NACAP1Q9BZK3 213 aa15.55■□□□□ 0.08
SMARCA5-201ENST00000283131 ANKRD30AQ9BXX3 1397 aa15.54■□□□□ 0.08
SMARCA5-201ENST00000283131 IMMTQ16891 758 aaKnown RBP15.54■□□□□ 0.08
SMARCA5-201ENST00000283131 DNAJC2Q99543 621 aaKnown RBP15.54■□□□□ 0.08
SMARCA5-201ENST00000283131 EIF5P55010 431 aaKnown RBP15.54■□□□□ 0.08
SMARCA5-201ENST00000283131 MYBBP1AQ9BQG0 1328 aaKnown RBP15.54■□□□□ 0.08
SMARCA5-201ENST00000283131 TNIP1Q15025 636 aa15.54■□□□□ 0.08
SMARCA5-201ENST00000283131 TTC39AQ5SRH9 613 aa15.54■□□□□ 0.08
SMARCA5-201ENST00000283131 DDX11Q96FC9 970 aa15.54■□□□□ 0.08
SMARCA5-201ENST00000283131 ME1P48163 572 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 IFFO1Q0D2I5 559 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 CNNM1Q9NRU3 951 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 MAP9Q49MG5 647 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 TSHZ2Q9NRE2 1034 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 FAM177BA6PVY3 158 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 LNPKQ9C0E8 428 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 GOPCQ9HD26 462 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 UACAQ9BZF9 1416 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 TNMDQ9H2S6 317 aa15.53■□□□□ 0.08
SMARCA5-201ENST00000283131 RIPK4P57078 832 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms