RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 RARSP54136 660 aaKnown RBP32.38■■■□□ 2.77
ROM1-201ENST00000278833 TERF2IPQ9NYB0 399 aa32.38■■■□□ 2.77
ROM1-201ENST00000278833 TNNT2P45379 298 aaPredicted RBP32.37■■■□□ 2.77
ROM1-201ENST00000278833 EID1Q9Y6B2 187 aa32.36■■■□□ 2.77
ROM1-201ENST00000278833 ATP7BP35670 1465 aa32.36■■■□□ 2.77
ROM1-201ENST00000278833 RIMS2Q9UQ26 1411 aa32.36■■■□□ 2.77
ROM1-201ENST00000278833 C8orf34Q49A92 452 aa32.35■■■□□ 2.77
ROM1-201ENST00000278833 MYH16Q9H6N6 1097 aa32.35■■■□□ 2.77
ROM1-201ENST00000278833 NPM2Q86SE8 214 aaKnown RBP32.35■■■□□ 2.77
ROM1-201ENST00000278833 CLUAP1Q96AJ1 413 aa32.35■■■□□ 2.77
ROM1-201ENST00000278833 PNPLA6Q8IY17 1366 aa32.34■■■□□ 2.77
ROM1-201ENST00000278833 SKAP1Q86WV1 359 aa32.33■■■□□ 2.77
ROM1-201ENST00000278833 SRPK2P78362 688 aaKnown RBP32.33■■■□□ 2.77
ROM1-201ENST00000278833 PRAM1Q96QH2 718 aa32.31■■■□□ 2.76
ROM1-201ENST00000278833 KNDC1Q76NI1 1749 aa32.31■■■□□ 2.76
ROM1-201ENST00000278833 HDGFP51858 240 aaKnown RBP32.3■■■□□ 2.76
ROM1-201ENST00000278833 PLEKHF1Q96S99 279 aa32.29■■■□□ 2.76
ROM1-201ENST00000278833 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.29■■■□□ 2.76
ROM1-201ENST00000278833 RRP7AQ9Y3A4 280 aaKnown RBP32.29■■■□□ 2.76
ROM1-201ENST00000278833 IL16Q14005 1332 aa32.29■■■□□ 2.76
ROM1-201ENST00000278833 MAPK8IP3Q9UPT6 1336 aa32.29■■■□□ 2.76
ROM1-201ENST00000278833 U2AF1L5P0DN76 240 aaPredicted RBP32.28■■■□□ 2.76
ROM1-201ENST00000278833 U2AF1Q01081 240 aaKnown RBP eCLIP32.28■■■□□ 2.76
ROM1-201ENST00000278833 NRXN3Q9Y4C0 1643 aa32.28■■■□□ 2.76
ROM1-201ENST00000278833 STK26Q9P289 416 aa32.27■■■□□ 2.76
ROM1-201ENST00000278833 FYB1O15117 783 aa32.27■■■□□ 2.76
ROM1-201ENST00000278833 CANXP27824 592 aaKnown RBP32.27■■■□□ 2.76
ROM1-201ENST00000278833 POGKQ9P215 609 aa32.26■■■□□ 2.75
ROM1-201ENST00000278833 HDGFL2Q7Z4V5 671 aaPredicted RBP32.25■■■□□ 2.75
ROM1-201ENST00000278833 NPHP4O75161 1426 aaPredicted RBP32.25■■■□□ 2.75
ROM1-201ENST00000278833 SENP3Q9H4L4 574 aaPredicted RBP32.25■■■□□ 2.75
ROM1-201ENST00000278833 MINK1Q8N4C8 1332 aaPredicted RBP32.24■■■□□ 2.75
ROM1-201ENST00000278833 USP35Q9P2H5 1018 aa32.24■■■□□ 2.75
ROM1-201ENST00000278833 IGHDP01880 384 aa32.23■■■□□ 2.75
ROM1-201ENST00000278833 PMFBP1Q8TBY8 1022 aa32.23■■■□□ 2.75
ROM1-201ENST00000278833 SAFB2Q14151 953 aaKnown RBP eCLIP32.23■■■□□ 2.75
ROM1-201ENST00000278833 NEUROD2Q15784 382 aa32.23■■■□□ 2.75
ROM1-201ENST00000278833 PANK1Q8TE04 598 aa32.23■■■□□ 2.75
ROM1-201ENST00000278833 PPM1GO15355 546 aaPredicted RBP32.22■■■□□ 2.75
ROM1-201ENST00000278833 COG6Q9Y2V7 657 aa32.22■■■□□ 2.75
ROM1-201ENST00000278833 PNNQ9H307 717 aaKnown RBP32.2■■■□□ 2.75
ROM1-201ENST00000278833 NBR1Q14596 966 aa32.2■■■□□ 2.74
ROM1-201ENST00000278833 RTL5Q5HYW3 569 aaPredicted RBP32.2■■■□□ 2.74
ROM1-201ENST00000278833 CDK19Q9BWU1 502 aa32.2■■■□□ 2.74
ROM1-201ENST00000278833 GGNBP2Q9H3C7 697 aa32.2■■■□□ 2.74
ROM1-201ENST00000278833 PLEKHG1Q9ULL1 1385 aa32.19■■■□□ 2.74
ROM1-201ENST00000278833 TMPOP42166 694 aaKnown RBP32.18■■■□□ 2.74
ROM1-201ENST00000278833 DEKP35659 375 aaKnown RBP32.17■■■□□ 2.74
ROM1-201ENST00000278833 TECPR2O15040 1411 aa32.16■■■□□ 2.74
ROM1-201ENST00000278833 LRRC7Q96NW7 1537 aa32.15■■■□□ 2.74
ROM1-201ENST00000278833 SLC26A8Q96RN1 970 aa32.14■■■□□ 2.74
ROM1-201ENST00000278833 TRIM35Q9UPQ4 493 aa32.14■■■□□ 2.74
ROM1-201ENST00000278833 MON2Q7Z3U7 1717 aa32.14■■■□□ 2.74
ROM1-201ENST00000278833 CPS1P31327 1500 aa32.14■■■□□ 2.74
ROM1-201ENST00000278833 RGS3P49796 1198 aa32.14■■■□□ 2.74
ROM1-201ENST00000278833 CPSF1Q10570 1443 aaKnown RBP32.14■■■□□ 2.74
ROM1-201ENST00000278833 FRAT1Q92837 279 aaPredicted RBP32.13■■■□□ 2.73
ROM1-201ENST00000278833 FAM135BQ49AJ0 1406 aa32.12■■■□□ 2.73
ROM1-201ENST00000278833 RLBP1P12271 317 aa32.12■■■□□ 2.73
ROM1-201ENST00000278833 DIAPH1O60610 1272 aaKnown RBP32.12■■■□□ 2.73
ROM1-201ENST00000278833 EDC4Q6P2E9 1401 aaKnown RBP32.11■■■□□ 2.73
ROM1-201ENST00000278833 SIRT1Q96EB6 747 aa32.11■■■□□ 2.73
ROM1-201ENST00000278833 PPIP5K1Q6PFW1 1433 aa32.11■■■□□ 2.73
ROM1-201ENST00000278833 ZKSCAN2Q63HK3 967 aa32.1■■■□□ 2.73
ROM1-201ENST00000278833 MVPQ14764 893 aaKnown RBP32.1■■■□□ 2.73
ROM1-201ENST00000278833 AKAP12Q02952 1782 aa32.09■■■□□ 2.73
ROM1-201ENST00000278833 CABP1Q9NZU7 370 aa32.08■■■□□ 2.73
ROM1-201ENST00000278833 CDK12Q9NYV4 1490 aaPredicted RBP32.08■■■□□ 2.73
ROM1-201ENST00000278833 ADAMTS13Q76LX8 1427 aa32.08■■■□□ 2.73
ROM1-201ENST00000278833 U2SURPO15042 1029 aaKnown RBP32.07■■■□□ 2.72
ROM1-201ENST00000278833 FCHSD2O94868 740 aa32.07■■■□□ 2.72
ROM1-201ENST00000278833 PCDHB15Q9Y5E8 787 aa32.06■■■□□ 2.72
ROM1-201ENST00000278833 MAP2P11137 1827 aaKnown RBP32.05■■■□□ 2.72
ROM1-201ENST00000278833 AATKQ6ZMQ8 1374 aa32.05■■■□□ 2.72
ROM1-201ENST00000278833 RWDD1Q9H446 243 aaPredicted RBP32.04■■■□□ 2.72
ROM1-201ENST00000278833 TBX22Q9Y458 520 aa32.03■■■□□ 2.72
ROM1-201ENST00000278833 DZIP1LQ8IYY4 767 aaKnown RBP32.03■■■□□ 2.72
ROM1-201ENST00000278833 ZNF335Q9H4Z2 1342 aaPredicted RBP32.02■■■□□ 2.72
ROM1-201ENST00000278833 ITSN1Q15811 1721 aa32.02■■■□□ 2.72
ROM1-201ENST00000278833 TNNQ9UQP3 1299 aa32.01■■■□□ 2.72
ROM1-201ENST00000278833 EXOSC9Q06265 439 aaKnown RBP32.01■■■□□ 2.71
ROM1-201ENST00000278833 ZNF428Q96B54 188 aa32.01■■■□□ 2.71
ROM1-201ENST00000278833 BCL11AQ9H165 835 aa32.01■■■□□ 2.71
ROM1-201ENST00000278833 USP19O94966 1318 aa32■■■□□ 2.71
ROM1-201ENST00000278833 BCL2L13Q9BXK5 485 aa31.99■■■□□ 2.71
ROM1-201ENST00000278833 RSPH6AQ9H0K4 717 aa31.99■■■□□ 2.71
ROM1-201ENST00000278833 BRPF1P55201 1214 aaPredicted RBP31.98■■■□□ 2.71
ROM1-201ENST00000278833 TSR2Q969E8 191 aaKnown RBP31.98■■■□□ 2.71
ROM1-201ENST00000278833 POLKQ9UBT6 870 aa31.98■■■□□ 2.71
ROM1-201ENST00000278833 WASLO00401 505 aaPredicted RBP31.97■■■□□ 2.71
ROM1-201ENST00000278833 RIPK4P57078 832 aa31.97■■■□□ 2.71
ROM1-201ENST00000278833 ALDH1L2Q3SY69 923 aa31.97■■■□□ 2.71
ROM1-201ENST00000278833 DIP2AQ14689 1571 aa31.97■■■□□ 2.71
ROM1-201ENST00000278833 KIF16BQ96L93 1317 aa31.97■■■□□ 2.71
ROM1-201ENST00000278833 SMC4Q9NTJ3 1288 aa31.97■■■□□ 2.71
ROM1-201ENST00000278833 LAS1LQ9Y4W2 734 aaKnown RBP31.97■■■□□ 2.71
ROM1-201ENST00000278833 NRKQ7Z2Y5 1582 aa31.97■■■□□ 2.71
ROM1-201ENST00000278833 DDX19BQ9UMR2 479 aa31.96■■■□□ 2.71
ROM1-201ENST00000278833 NEFMP07197 916 aa31.95■■■□□ 2.71
ROM1-201ENST00000278833 HDAC1Q13547 482 aaPredicted RBP31.95■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms