RNA–Protein interactions for RNA: ENST00000278572.10

RPS3-201, Transcript of ribosomal protein S3, humanhuman

TSL 3 BASIC

Gene RPS3, Length 907 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-201ENST00000278572 POLR3AO14802 1390 aaPredicted RBP21.29■■□□□ 1
RPS3-201ENST00000278572 SRPK2P78362 688 aaKnown RBP21.27■■□□□ 1
RPS3-201ENST00000278572 CCDC125Q86Z20 511 aa21.27■■□□□ 1
RPS3-201ENST00000278572 BTG4Q9NY30 223 aa21.27■■□□□ 1
RPS3-201ENST00000278572 PLEKHG3A1L390 1219 aa21.26■□□□□ 0.99
RPS3-201ENST00000278572 SEPT12Q8IYM1 358 aa21.26■□□□□ 0.99
RPS3-201ENST00000278572 ACEP12821 1306 aa21.26■□□□□ 0.99
RPS3-201ENST00000278572 TOPAZ1Q8N9V7 1692 aa21.25■□□□□ 0.99
RPS3-201ENST00000278572 SIN3AQ96ST3 1273 aa21.25■□□□□ 0.99
RPS3-201ENST00000278572 PRDM11Q9NQV5 511 aa21.25■□□□□ 0.99
RPS3-201ENST00000278572 NEUROD1Q13562 356 aa21.24■□□□□ 0.99
RPS3-201ENST00000278572 NBPF8Q3BBV2 869 aa21.24■□□□□ 0.99
RPS3-201ENST00000278572 COL14A1Q05707 1796 aaKnown RBP21.23■□□□□ 0.99
RPS3-201ENST00000278572 ONECUT3O60422 494 aaPredicted RBP21.23■□□□□ 0.99
RPS3-201ENST00000278572 PPIP5K1Q6PFW1 1433 aa21.22■□□□□ 0.99
RPS3-201ENST00000278572 ROCK2O75116 1388 aaKnown RBP21.22■□□□□ 0.99
RPS3-201ENST00000278572 A0A0G2JS52 829 aa21.21■□□□□ 0.99
RPS3-201ENST00000278572 MYT1Q01538 1121 aa21.21■□□□□ 0.99
RPS3-201ENST00000278572 CABP2Q9NPB3 220 aa21.21■□□□□ 0.99
RPS3-201ENST00000278572 KIAA0232Q92628 1395 aa21.21■□□□□ 0.99
RPS3-201ENST00000278572 BLMP54132 1417 aaPredicted RBP21.21■□□□□ 0.99
RPS3-201ENST00000278572 NRAPQ86VF7 1730 aa21.2■□□□□ 0.98
RPS3-201ENST00000278572 CRYBG1Q9Y4K1 1723 aa21.19■□□□□ 0.98
RPS3-201ENST00000278572 KRT27Q7Z3Y8 459 aa21.19■□□□□ 0.98
RPS3-201ENST00000278572 BRD4O60885 1362 aaPredicted RBP21.19■□□□□ 0.98
RPS3-201ENST00000278572 FAM98CQ17RN3 349 aaKnown RBP21.18■□□□□ 0.98
RPS3-201ENST00000278572 NUTM2GQ5VZR2 741 aa21.18■□□□□ 0.98
RPS3-201ENST00000278572 ABTB2Q8N961 1025 aa21.18■□□□□ 0.98
RPS3-201ENST00000278572 SPATA31A5Q5VU36 1347 aa21.17■□□□□ 0.98
RPS3-201ENST00000278572 EVC2Q86UK5 1308 aa21.17■□□□□ 0.98
RPS3-201ENST00000278572 SPATA31A7Q8IWB4 1347 aa21.17■□□□□ 0.98
RPS3-201ENST00000278572 TRPM1Q7Z4N2 1603 aa21.17■□□□□ 0.98
RPS3-201ENST00000278572 QRICH2Q9H0J4 1663 aa21.17■□□□□ 0.98
RPS3-201ENST00000278572 ZC3H6P61129 1189 aaKnown RBP21.16■□□□□ 0.98
RPS3-201ENST00000278572 SF3B2Q13435 895 aaKnown RBP21.16■□□□□ 0.98
RPS3-201ENST00000278572 PHRF1Q9P1Y6 1649 aaKnown RBP21.15■□□□□ 0.98
RPS3-201ENST00000278572 USP19O94966 1318 aa21.15■□□□□ 0.98
RPS3-201ENST00000278572 CHRNA2Q15822 529 aa21.14■□□□□ 0.97
RPS3-201ENST00000278572 NLRP13Q86W25 1043 aa21.14■□□□□ 0.97
RPS3-201ENST00000278572 ZRANB1Q9UGI0 708 aa21.14■□□□□ 0.97
RPS3-201ENST00000278572 SRCAPQ6ZRS2 3230 aa21.14■□□□□ 0.97
RPS3-201ENST00000278572 CABP1Q9NZU7 370 aa21.13■□□□□ 0.97
RPS3-201ENST00000278572 USP6P35125 1406 aa21.12■□□□□ 0.97
RPS3-201ENST00000278572 CPDO75976 1380 aa21.12■□□□□ 0.97
RPS3-201ENST00000278572 NRKQ7Z2Y5 1582 aa21.12■□□□□ 0.97
RPS3-201ENST00000278572 STRN4Q9NRL3 753 aa21.11■□□□□ 0.97
RPS3-201ENST00000278572 SPATA31A1Q5TZJ5 1347 aa21.1■□□□□ 0.97
RPS3-201ENST00000278572 BRWD3Q6RI45 1802 aa21.1■□□□□ 0.97
RPS3-201ENST00000278572 TONSLQ96HA7 1378 aa21.1■□□□□ 0.97
RPS3-201ENST00000278572 SSH2Q76I76 1423 aa21.09■□□□□ 0.97
RPS3-201ENST00000278572 GCP02774 474 aa21.08■□□□□ 0.97
RPS3-201ENST00000278572 EVA1CP58658 441 aa21.08■□□□□ 0.97
RPS3-201ENST00000278572 SBNO2Q9Y2G9 1366 aa21.07■□□□□ 0.96
RPS3-201ENST00000278572 THSD7AQ9UPZ6 1657 aa21.06■□□□□ 0.96
RPS3-201ENST00000278572 NLRP6P59044 892 aa21.06■□□□□ 0.96
RPS3-201ENST00000278572 DEFB132Q7Z7B7 95 aa21.06■□□□□ 0.96
RPS3-201ENST00000278572 CARD11Q9BXL7 1154 aa21.06■□□□□ 0.96
RPS3-201ENST00000278572 ZNF692Q9BU19 519 aaPredicted RBP21.05■□□□□ 0.96
RPS3-201ENST00000278572 BAG6P46379 1132 aa21.04■□□□□ 0.96
RPS3-201ENST00000278572 CAMTA1Q9Y6Y1 1673 aa21.03■□□□□ 0.96
RPS3-201ENST00000278572 BARGINQ6ZT62 677 aa21.03■□□□□ 0.96
RPS3-201ENST00000278572 USP35Q9P2H5 1018 aa21.03■□□□□ 0.96
RPS3-201ENST00000278572 SLIT3O75094 1523 aa21.03■□□□□ 0.96
RPS3-201ENST00000278572 TRIM26Q12899 539 aaPredicted RBP21.02■□□□□ 0.96
RPS3-201ENST00000278572 LARP1Q6PKG0 1096 aaKnown RBP21.02■□□□□ 0.96
RPS3-201ENST00000278572 LMO7Q8WWI1 1683 aa21.02■□□□□ 0.95
RPS3-201ENST00000278572 TCP11L2Q8N4U5 519 aa21.01■□□□□ 0.95
RPS3-201ENST00000278572 COL5A2P05997 1499 aaPredicted RBP21.01■□□□□ 0.95
RPS3-201ENST00000278572 TTC21BQ7Z4L5 1316 aa21■□□□□ 0.95
RPS3-201ENST00000278572 TTC21AQ8NDW8 1320 aa21■□□□□ 0.95
RPS3-201ENST00000278572 AATKQ6ZMQ8 1374 aa20.99■□□□□ 0.95
RPS3-201ENST00000278572 CPSF1Q10570 1443 aaKnown RBP20.99■□□□□ 0.95
RPS3-201ENST00000278572 ZBTB7CA1YPR0 619 aa20.99■□□□□ 0.95
RPS3-201ENST00000278572 FAM182BQ5T319 152 aa20.99■□□□□ 0.95
RPS3-201ENST00000278572 THRAP3Q9Y2W1 955 aaKnown RBP20.99■□□□□ 0.95
RPS3-201ENST00000278572 KTN1Q86UP2 1357 aaKnown RBP20.98■□□□□ 0.95
RPS3-201ENST00000278572 KCNH5Q8NCM2 988 aa20.98■□□□□ 0.95
RPS3-201ENST00000278572 PIK3C2AO00443 1686 aa20.97■□□□□ 0.95
RPS3-201ENST00000278572 PDE3BQ13370 1112 aa20.97■□□□□ 0.95
RPS3-201ENST00000278572 FAM196AQ6ZSG2 479 aa20.97■□□□□ 0.95
RPS3-201ENST00000278572 DISP2A7MBM2 1401 aa20.96■□□□□ 0.95
RPS3-201ENST00000278572 CRB1P82279 1406 aa20.96■□□□□ 0.95
RPS3-201ENST00000278572 RGPD1P0DJD0 1748 aa20.94■□□□□ 0.94
RPS3-201ENST00000278572 EN1Q05925 392 aaPredicted RBP20.92■□□□□ 0.94
RPS3-201ENST00000278572 ARHGEF25Q86VW2 580 aa20.92■□□□□ 0.94
RPS3-201ENST00000278572 TMC1Q8TDI8 760 aa20.92■□□□□ 0.94
RPS3-201ENST00000278572 AKAP12Q02952 1782 aa20.91■□□□□ 0.94
RPS3-201ENST00000278572 TOM1L2Q6ZVM7 507 aa20.91■□□□□ 0.94
RPS3-201ENST00000278572 HDGFL2Q7Z4V5 671 aaPredicted RBP20.91■□□□□ 0.94
RPS3-201ENST00000278572 WDR17Q8IZU2 1322 aa20.9■□□□□ 0.94
RPS3-201ENST00000278572 C11orf95C9JLR9 678 aaPredicted RBP20.9■□□□□ 0.94
RPS3-201ENST00000278572 SOX12O15370 315 aa20.9■□□□□ 0.94
RPS3-201ENST00000278572 TRIM37O94972 964 aa20.9■□□□□ 0.94
RPS3-201ENST00000278572 PUS7Q96PZ0 661 aaKnown RBP20.9■□□□□ 0.94
RPS3-201ENST00000278572 SLC24A1O60721 1099 aa20.89■□□□□ 0.93
RPS3-201ENST00000278572 USP31Q70CQ4 1352 aa20.88■□□□□ 0.93
RPS3-201ENST00000278572 PARD3Q8TEW0 1356 aa20.88■□□□□ 0.93
RPS3-201ENST00000278572 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.88■□□□□ 0.93
RPS3-201ENST00000278572 TERF2IPQ9NYB0 399 aa20.88■□□□□ 0.93
RPS3-201ENST00000278572 CD163L1Q9NR16 1453 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 221.1 ms