RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 PPP2R1AP30153 589 aa16.98■□□□□ 0.31
C9orf3-201ENST00000277198 SALL2Q9Y467 1007 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-201ENST00000277198 ADAMTS8Q9UP79 889 aa16.96■□□□□ 0.31
C9orf3-201ENST00000277198 WDR43Q15061 677 aaKnown RBP eCLIP16.95■□□□□ 0.3
C9orf3-201ENST00000277198 NHSL1Q5SYE7 1610 aa16.94■□□□□ 0.3
C9orf3-201ENST00000277198 DLC1Q96QB1 1528 aa16.94■□□□□ 0.3
C9orf3-201ENST00000277198 JCADQ9P266 1359 aa16.94■□□□□ 0.3
C9orf3-201ENST00000277198 NGEFQ8N5V2 710 aa16.94■□□□□ 0.3
C9orf3-201ENST00000277198 SIRT1Q96EB6 747 aa16.94■□□□□ 0.3
C9orf3-201ENST00000277198 ZNF521Q96K83 1311 aa16.93■□□□□ 0.3
C9orf3-201ENST00000277198 ESCO1Q5FWF5 840 aa16.93■□□□□ 0.3
C9orf3-201ENST00000277198 POGKQ9P215 609 aa16.93■□□□□ 0.3
C9orf3-201ENST00000277198 XPCQ01831 940 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-201ENST00000277198 ZBTB47Q9UFB7 747 aaPredicted RBP16.93■□□□□ 0.3
C9orf3-201ENST00000277198 LRP6O75581 1613 aa16.92■□□□□ 0.3
C9orf3-201ENST00000277198 MINK1Q8N4C8 1332 aaPredicted RBP16.92■□□□□ 0.3
C9orf3-201ENST00000277198 RGS17Q9UGC6 210 aaPredicted RBP16.91■□□□□ 0.3
C9orf3-201ENST00000277198 FMN2Q9NZ56 1722 aa16.91■□□□□ 0.3
C9orf3-201ENST00000277198 SBNO2Q9Y2G9 1366 aa16.91■□□□□ 0.3
C9orf3-201ENST00000277198 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
C9orf3-201ENST00000277198 FOXO3O43524 673 aa16.89■□□□□ 0.3
C9orf3-201ENST00000277198 PDE4AP27815 886 aa16.89■□□□□ 0.3
C9orf3-201ENST00000277198 GOLGA2Q08379 1002 aa16.89■□□□□ 0.3
C9orf3-201ENST00000277198 DUSP27Q5VZP5 1158 aa16.89■□□□□ 0.3
C9orf3-201ENST00000277198 BACH2Q9BYV9 841 aa16.89■□□□□ 0.3
C9orf3-201ENST00000277198 ARHGEF28Q8N1W1 1705 aaKnown RBP16.89■□□□□ 0.29
C9orf3-201ENST00000277198 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.29
C9orf3-201ENST00000277198 PAK3O75914 559 aaPredicted RBP16.88■□□□□ 0.29
C9orf3-201ENST00000277198 SOS2Q07890 1332 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-201ENST00000277198 MYOM1P52179 1685 aa16.87■□□□□ 0.29
C9orf3-201ENST00000277198 NUTM2BA6NNL0 878 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-201ENST00000277198 NUTM2EB1AL46 878 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-201ENST00000277198 NUTM2AQ8IVF1 878 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-201ENST00000277198 CRBNQ96SW2 442 aa16.87■□□□□ 0.29
C9orf3-201ENST00000277198 RGPD8O14715 1765 aaPredicted RBP16.87■□□□□ 0.29
C9orf3-201ENST00000277198 SHPRHQ149N8 1683 aa16.87■□□□□ 0.29
C9orf3-201ENST00000277198 PNPLA6Q8IY17 1366 aa16.86■□□□□ 0.29
C9orf3-201ENST00000277198 TRMT2AQ8IZ69 625 aaKnown RBP16.86■□□□□ 0.29
C9orf3-201ENST00000277198 USP32Q8NFA0 1604 aa16.86■□□□□ 0.29
C9orf3-201ENST00000277198 PRR36Q9H6K5 1346 aa16.86■□□□□ 0.29
C9orf3-201ENST00000277198 ADGRB2O60241 1585 aa16.85■□□□□ 0.29
C9orf3-201ENST00000277198 LRRC59Q96AG4 307 aaKnown RBP16.85■□□□□ 0.29
C9orf3-201ENST00000277198 PXDNQ92626 1479 aa16.85■□□□□ 0.29
C9orf3-201ENST00000277198 PLIN1O60240 522 aa16.84■□□□□ 0.29
C9orf3-201ENST00000277198 SLFN5Q08AF3 891 aa16.84■□□□□ 0.29
C9orf3-201ENST00000277198 BCL11AQ9H165 835 aa16.84■□□□□ 0.29
C9orf3-201ENST00000277198 SPATA31A6Q5VVP1 1343 aa16.83■□□□□ 0.29
C9orf3-201ENST00000277198 CENPQQ7L2Z9 268 aaPredicted RBP16.83■□□□□ 0.28
C9orf3-201ENST00000277198 PMFBP1Q8TBY8 1022 aa16.83■□□□□ 0.28
C9orf3-201ENST00000277198 KDM2BQ8NHM5 1336 aa16.83■□□□□ 0.28
C9orf3-201ENST00000277198 WASLO00401 505 aaPredicted RBP16.82■□□□□ 0.28
C9orf3-201ENST00000277198 NPHP3Q7Z494 1330 aa16.82■□□□□ 0.28
C9orf3-201ENST00000277198 POTEAQ6S8J7 498 aa16.82■□□□□ 0.28
C9orf3-201ENST00000277198 PHF8Q9UPP1 1060 aa16.82■□□□□ 0.28
C9orf3-201ENST00000277198 E9PSI1 815 aa16.8■□□□□ 0.28
C9orf3-201ENST00000277198 MEX3CQ5U5Q3 659 aaKnown RBP16.8■□□□□ 0.28
C9orf3-201ENST00000277198 POLR3AO14802 1390 aaPredicted RBP16.8■□□□□ 0.28
C9orf3-201ENST00000277198 ANKARQ7Z5J8 1434 aa16.79■□□□□ 0.28
C9orf3-201ENST00000277198 TULP4Q9NRJ4 1543 aa16.79■□□□□ 0.28
C9orf3-201ENST00000277198 ADAMTS2O95450 1211 aa16.78■□□□□ 0.28
C9orf3-201ENST00000277198 ATP7BP35670 1465 aa16.78■□□□□ 0.28
C9orf3-201ENST00000277198 CENPJQ9HC77 1338 aaPredicted RBP16.78■□□□□ 0.28
C9orf3-201ENST00000277198 PLEKHG5O94827 1062 aa16.78■□□□□ 0.28
C9orf3-201ENST00000277198 KRT28Q7Z3Y7 464 aa16.78■□□□□ 0.28
C9orf3-201ENST00000277198 DDRGK1Q96HY6 314 aa16.78■□□□□ 0.28
C9orf3-201ENST00000277198 CDK19Q9BWU1 502 aa16.78■□□□□ 0.28
C9orf3-201ENST00000277198 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
C9orf3-201ENST00000277198 DEKP35659 375 aaKnown RBP16.77■□□□□ 0.27
C9orf3-201ENST00000277198 C20orf194Q5TEA3 1177 aa16.77■□□□□ 0.27
C9orf3-201ENST00000277198 PUS7Q96PZ0 661 aaKnown RBP16.77■□□□□ 0.27
C9orf3-201ENST00000277198 CARD14Q9BXL6 1004 aa16.77■□□□□ 0.27
C9orf3-201ENST00000277198 USP35Q9P2H5 1018 aa16.77■□□□□ 0.27
C9orf3-201ENST00000277198 RTL5Q5HYW3 569 aaPredicted RBP16.76■□□□□ 0.27
C9orf3-201ENST00000277198 NINLQ9Y2I6 1382 aa16.76■□□□□ 0.27
C9orf3-201ENST00000277198 NUDT16Q96DE0 195 aaKnown RBP16.75■□□□□ 0.27
C9orf3-201ENST00000277198 C8orf37Q96NL8 207 aa16.75■□□□□ 0.27
C9orf3-201ENST00000277198 SPATA31A3Q5VYP0 1347 aa16.75■□□□□ 0.27
C9orf3-201ENST00000277198 APAF1O14727 1248 aa16.75■□□□□ 0.27
C9orf3-201ENST00000277198 QRICH2Q9H0J4 1663 aa16.74■□□□□ 0.27
C9orf3-201ENST00000277198 PSME1Q06323 249 aa16.73■□□□□ 0.27
C9orf3-201ENST00000277198 NBR1Q14596 966 aa16.73■□□□□ 0.27
C9orf3-201ENST00000277198 NCBP3Q53F19 620 aaKnown RBP16.73■□□□□ 0.27
C9orf3-201ENST00000277198 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
C9orf3-201ENST00000277198 CABLES1Q8TDN4 633 aa16.73■□□□□ 0.27
C9orf3-201ENST00000277198 COL22A1Q8NFW1 1626 aaPredicted RBP16.73■□□□□ 0.27
C9orf3-201ENST00000277198 AFF2P51816 1311 aa16.72■□□□□ 0.27
C9orf3-201ENST00000277198 NPM2Q86SE8 214 aaKnown RBP16.72■□□□□ 0.27
C9orf3-201ENST00000277198 TNS3Q68CZ2 1445 aa16.72■□□□□ 0.27
C9orf3-201ENST00000277198 PPM1GO15355 546 aaPredicted RBP16.71■□□□□ 0.27
C9orf3-201ENST00000277198 PDE3AQ14432 1141 aa16.71■□□□□ 0.27
C9orf3-201ENST00000277198 LMOD2Q6P5Q4 547 aa16.71■□□□□ 0.27
C9orf3-201ENST00000277198 SOCS7O14512 581 aa16.71■□□□□ 0.27
C9orf3-201ENST00000277198 SRPK2P78362 688 aaKnown RBP16.7■□□□□ 0.26
C9orf3-201ENST00000277198 AAMPQ13685 434 aa16.7■□□□□ 0.26
C9orf3-201ENST00000277198 CCDC146Q8IYE0 955 aa16.7■□□□□ 0.26
C9orf3-201ENST00000277198 NGDNQ8NEJ9 315 aaKnown RBP16.7■□□□□ 0.26
C9orf3-201ENST00000277198 FAM161AQ3B820 660 aa16.69■□□□□ 0.26
C9orf3-201ENST00000277198 TOPAZ1Q8N9V7 1692 aa16.69■□□□□ 0.26
C9orf3-201ENST00000277198 CGNL1Q0VF96 1302 aa16.69■□□□□ 0.26
C9orf3-201ENST00000277198 TRPM3Q9HCF6 1732 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms