RNA–Protein interactions for RNA: ENST00000275820.3

NOM1-201, Transcript of nucleolar protein with MIF4G domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOM1, Length 6,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOM1-201ENST00000275820 SYTL4Q96C24 671 aaPredicted RBP22.64■■□□□ 1.22
NOM1-201ENST00000275820 ATF7IPQ6VMQ6 1270 aa22.64■■□□□ 1.22
NOM1-201ENST00000275820 PLEKHH2Q8IVE3 1493 aa22.64■■□□□ 1.22
NOM1-201ENST00000275820 GNAI2P04899 355 aa22.63■■□□□ 1.21
NOM1-201ENST00000275820 NLRP2Q9NX02 1062 aa22.63■■□□□ 1.21
NOM1-201ENST00000275820 SAFBQ15424 915 aaKnown RBP eCLIP22.63■■□□□ 1.21
NOM1-201ENST00000275820 TOPBP1Q92547 1522 aa22.63■■□□□ 1.21
NOM1-201ENST00000275820 NESP48681 1621 aa22.62■■□□□ 1.21
NOM1-201ENST00000275820 LETM1O95202 739 aaPredicted RBP22.61■■□□□ 1.21
NOM1-201ENST00000275820 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
NOM1-201ENST00000275820 SLC4A2P04920 1241 aa22.61■■□□□ 1.21
NOM1-201ENST00000275820 CDK19Q9BWU1 502 aa22.6■■□□□ 1.21
NOM1-201ENST00000275820 TSPY26PQ9H489 355 aa22.6■■□□□ 1.21
NOM1-201ENST00000275820 CABP1Q9NZU7 370 aa22.6■■□□□ 1.21
NOM1-201ENST00000275820 NAT10Q9H0A0 1025 aaKnown RBP22.6■■□□□ 1.21
NOM1-201ENST00000275820 RAD21O60216 631 aa22.58■■□□□ 1.21
NOM1-201ENST00000275820 SDF4Q9BRK5 362 aa22.58■■□□□ 1.21
NOM1-201ENST00000275820 DHX16O60231 1041 aaKnown RBP22.58■■□□□ 1.21
NOM1-201ENST00000275820 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
NOM1-201ENST00000275820 ABTB2Q8N961 1025 aa22.58■■□□□ 1.21
NOM1-201ENST00000275820 K7ELQ4 463 aaPredicted RBP22.58■■□□□ 1.2
NOM1-201ENST00000275820 CCDC173Q0VFZ6 552 aa22.58■■□□□ 1.2
NOM1-201ENST00000275820 CHD1LQ86WJ1 897 aa22.58■■□□□ 1.2
NOM1-201ENST00000275820 SLFN5Q08AF3 891 aa22.57■■□□□ 1.2
NOM1-201ENST00000275820 IL27Q8NEV9 243 aa22.57■■□□□ 1.2
NOM1-201ENST00000275820 HIP1O00291 1037 aa22.56■■□□□ 1.2
NOM1-201ENST00000275820 TEX35Q5T0J7 233 aa22.56■■□□□ 1.2
NOM1-201ENST00000275820 MNS1Q8NEH6 495 aa22.56■■□□□ 1.2
NOM1-201ENST00000275820 CWC22Q9HCG8 908 aaKnown RBP22.56■■□□□ 1.2
NOM1-201ENST00000275820 CCT4P50991 539 aaKnown RBP22.56■■□□□ 1.2
NOM1-201ENST00000275820 DNAJC2Q99543 621 aaKnown RBP22.56■■□□□ 1.2
NOM1-201ENST00000275820 TXNDC2Q86VQ3 553 aa22.56■■□□□ 1.2
NOM1-201ENST00000275820 FIBPO43427 364 aa22.55■■□□□ 1.2
NOM1-201ENST00000275820 PDCP20941 246 aa22.55■■□□□ 1.2
NOM1-201ENST00000275820 CDK13Q14004 1512 aaKnown RBP22.55■■□□□ 1.2
NOM1-201ENST00000275820 TRIM5Q9C035 493 aa22.55■■□□□ 1.2
NOM1-201ENST00000275820 OLFM4Q6UX06 510 aa22.55■■□□□ 1.2
NOM1-201ENST00000275820 ERC1Q8IUD2 1116 aa22.55■■□□□ 1.2
NOM1-201ENST00000275820 LRRCC1Q9C099 1032 aa22.54■■□□□ 1.2
NOM1-201ENST00000275820 WWC1Q8IX03 1113 aa22.54■■□□□ 1.2
NOM1-201ENST00000275820 IFT140Q96RY7 1462 aa22.54■■□□□ 1.2
NOM1-201ENST00000275820 PLEKHO1Q53GL0 409 aaPredicted RBP22.54■■□□□ 1.2
NOM1-201ENST00000275820 MRC2Q9UBG0 1479 aa22.54■■□□□ 1.2
NOM1-201ENST00000275820 EPRSP07814 1512 aaKnown RBP22.54■■□□□ 1.2
NOM1-201ENST00000275820 HDGFL1Q5TGJ6 251 aa22.53■■□□□ 1.2
NOM1-201ENST00000275820 ARGLU1Q9NWB6 273 aaPredicted RBP22.53■■□□□ 1.2
NOM1-201ENST00000275820 PCF11O94913 1555 aaKnown RBP22.53■■□□□ 1.2
NOM1-201ENST00000275820 C11orf95C9JLR9 678 aaPredicted RBP22.52■■□□□ 1.2
NOM1-201ENST00000275820 ATF3P18847 181 aa22.52■■□□□ 1.2
NOM1-201ENST00000275820 TRIM34Q9BYJ4 488 aa22.52■■□□□ 1.2
NOM1-201ENST00000275820 SETQ01105 290 aaPredicted RBP22.52■■□□□ 1.2
NOM1-201ENST00000275820 GPRASP1Q5JY77 1395 aa22.52■■□□□ 1.2
NOM1-201ENST00000275820 BCL11BQ9C0K0 894 aaPredicted RBP22.51■■□□□ 1.19
NOM1-201ENST00000275820 HMGXB3Q12766 1538 aa22.51■■□□□ 1.19
NOM1-201ENST00000275820 KINO60870 393 aaKnown RBP22.51■■□□□ 1.19
NOM1-201ENST00000275820 ZNF692Q9BU19 519 aaPredicted RBP22.51■■□□□ 1.19
NOM1-201ENST00000275820 GRPEL1Q9HAV7 217 aa22.5■■□□□ 1.19
NOM1-201ENST00000275820 NSD3Q9BZ95 1437 aa22.49■■□□□ 1.19
NOM1-201ENST00000275820 SNAPC4Q5SXM2 1469 aa22.49■■□□□ 1.19
NOM1-201ENST00000275820 ANKRD30BQ9BXX2 1392 aa22.49■■□□□ 1.19
NOM1-201ENST00000275820 PDILTQ8N807 584 aa22.49■■□□□ 1.19
NOM1-201ENST00000275820 CYP46A1Q9Y6A2 500 aa22.49■■□□□ 1.19
NOM1-201ENST00000275820 KDM4AO75164 1064 aa22.48■■□□□ 1.19
NOM1-201ENST00000275820 BRMS1Q9HCU9 246 aa22.48■■□□□ 1.19
NOM1-201ENST00000275820 FYB1O15117 783 aa22.48■■□□□ 1.19
NOM1-201ENST00000275820 MTERF4Q7Z6M4 381 aaKnown RBP22.48■■□□□ 1.19
NOM1-201ENST00000275820 ANO8Q9HCE9 1232 aaPredicted RBP22.48■■□□□ 1.19
NOM1-201ENST00000275820 SRCIN1Q9C0H9 1055 aa22.48■■□□□ 1.19
NOM1-201ENST00000275820 SLC52A1Q9NWF4 448 aa22.48■■□□□ 1.19
NOM1-201ENST00000275820 RTEL1-TNFRSF6BF6WH68 1400 aa22.47■■□□□ 1.19
NOM1-201ENST00000275820 XBP1P17861 261 aa22.47■■□□□ 1.19
NOM1-201ENST00000275820 MCM4P33991 863 aa22.47■■□□□ 1.19
NOM1-201ENST00000275820 MAP7D2Q96T17 732 aa22.47■■□□□ 1.19
NOM1-201ENST00000275820 WDR33Q9C0J8 1336 aaKnown RBP22.47■■□□□ 1.19
NOM1-201ENST00000275820 RPGRIP1LQ68CZ1 1315 aa22.47■■□□□ 1.19
NOM1-201ENST00000275820 FCHSD2O94868 740 aa22.47■■□□□ 1.19
NOM1-201ENST00000275820 ESCO1Q5FWF5 840 aa22.47■■□□□ 1.19
NOM1-201ENST00000275820 MSH5O43196 834 aa22.47■■□□□ 1.19
NOM1-201ENST00000275820 DNMBPQ6XZF7 1577 aa22.46■■□□□ 1.19
NOM1-201ENST00000275820 ATAD2Q6PL18 1390 aa22.46■■□□□ 1.19
NOM1-201ENST00000275820 TMEM57Q8N5G2 664 aa22.46■■□□□ 1.19
NOM1-201ENST00000275820 TBC1D2BQ9UPU7 963 aa22.46■■□□□ 1.19
NOM1-201ENST00000275820 TCEAL9Q9UHQ7 104 aa22.46■■□□□ 1.19
NOM1-201ENST00000275820 MAP4K4O95819 1239 aaPredicted RBP22.46■■□□□ 1.19
NOM1-201ENST00000275820 CIZ1Q9ULV3 898 aaPredicted RBP22.46■■□□□ 1.19
NOM1-201ENST00000275820 TMPOP42166 694 aaKnown RBP22.46■■□□□ 1.19
NOM1-201ENST00000275820 SMC2O95347 1197 aa22.45■■□□□ 1.18
NOM1-201ENST00000275820 AEBP1Q8IUX7 1158 aa22.45■■□□□ 1.18
NOM1-201ENST00000275820 ZNF428Q96B54 188 aa22.45■■□□□ 1.18
NOM1-201ENST00000275820 ZNF396Q96N95 335 aaPredicted RBP22.45■■□□□ 1.18
NOM1-201ENST00000275820 PTPN23Q9H3S7 1636 aa22.45■■□□□ 1.18
NOM1-201ENST00000275820 CEBPZQ03701 1054 aaKnown RBP22.45■■□□□ 1.18
NOM1-201ENST00000275820 C20orf194Q5TEA3 1177 aa22.44■■□□□ 1.18
NOM1-201ENST00000275820 SART3Q15020 963 aaKnown RBP22.44■■□□□ 1.18
NOM1-201ENST00000275820 RRS1Q15050 365 aaKnown RBP22.44■■□□□ 1.18
NOM1-201ENST00000275820 FMNL2Q96PY5 1086 aa22.43■■□□□ 1.18
NOM1-201ENST00000275820 SPC24Q8NBT2 197 aa22.43■■□□□ 1.18
NOM1-201ENST00000275820 NAP1L1P55209 391 aaKnown RBP22.42■■□□□ 1.18
NOM1-201ENST00000275820 NFE2L2Q16236 605 aa22.42■■□□□ 1.18
NOM1-201ENST00000275820 STK3Q13188 491 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms