RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 MTHFSP49914 203 aa19.43■□□□□ 0.7
TRIM23-202ENST00000274327 TTC21BQ7Z4L5 1316 aa19.41■□□□□ 0.7
TRIM23-202ENST00000274327 NME9Q86XW9 330 aa19.41■□□□□ 0.7
TRIM23-202ENST00000274327 RBM33Q96EV2 1170 aaKnown RBP19.39■□□□□ 0.7
TRIM23-202ENST00000274327 COL3A1P02461 1466 aaPredicted RBP19.39■□□□□ 0.69
TRIM23-202ENST00000274327 CFAP53Q96M91 514 aa19.39■□□□□ 0.69
TRIM23-202ENST00000274327 MAP2P11137 1827 aaKnown RBP19.38■□□□□ 0.69
TRIM23-202ENST00000274327 PMFBP1Q8TBY8 1022 aa19.38■□□□□ 0.69
TRIM23-202ENST00000274327 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
TRIM23-202ENST00000274327 ZRANB1Q9UGI0 708 aa19.37■□□□□ 0.69
TRIM23-202ENST00000274327 AATKQ6ZMQ8 1374 aa19.36■□□□□ 0.69
TRIM23-202ENST00000274327 TTC21AQ8NDW8 1320 aa19.36■□□□□ 0.69
TRIM23-202ENST00000274327 OVOS2A0A0J9YW53 1432 aa19.36■□□□□ 0.69
TRIM23-202ENST00000274327 OVOS2Q6IE36 1432 aa19.36■□□□□ 0.69
TRIM23-202ENST00000274327 SMG6Q86US8 1419 aaKnown RBP19.36■□□□□ 0.69
TRIM23-202ENST00000274327 NCOA3Q9Y6Q9 1424 aa19.36■□□□□ 0.69
TRIM23-202ENST00000274327 PNPLA6Q8IY17 1366 aa19.36■□□□□ 0.69
TRIM23-202ENST00000274327 NGDNQ8NEJ9 315 aaKnown RBP19.35■□□□□ 0.69
TRIM23-202ENST00000274327 COG3Q96JB2 828 aa19.35■□□□□ 0.69
TRIM23-202ENST00000274327 USP54Q70EL1 1684 aa19.34■□□□□ 0.69
TRIM23-202ENST00000274327 PIK3C2AO00443 1686 aa19.33■□□□□ 0.68
TRIM23-202ENST00000274327 SENP3-EIF4A1A0A087X0R7 540 aa19.32■□□□□ 0.68
TRIM23-202ENST00000274327 POLKQ9UBT6 870 aa19.32■□□□□ 0.68
TRIM23-202ENST00000274327 PHF8Q9UPP1 1060 aa19.32■□□□□ 0.68
TRIM23-202ENST00000274327 USP31Q70CQ4 1352 aa19.32■□□□□ 0.68
TRIM23-202ENST00000274327 C14orf37Q86TY3 774 aa19.32■□□□□ 0.68
TRIM23-202ENST00000274327 TMEM94Q12767 1356 aa19.31■□□□□ 0.68
TRIM23-202ENST00000274327 C19orf44Q9H6X5 657 aa19.3■□□□□ 0.68
TRIM23-202ENST00000274327 DCCP43146 1447 aa19.3■□□□□ 0.68
TRIM23-202ENST00000274327 CDK12Q9NYV4 1490 aaPredicted RBP19.29■□□□□ 0.68
TRIM23-202ENST00000274327 XIRP1Q702N8 1843 aaKnown RBP19.29■□□□□ 0.68
TRIM23-202ENST00000274327 MARF1Q9Y4F3 1742 aaKnown RBP19.29■□□□□ 0.68
TRIM23-202ENST00000274327 FBLN1P23142 703 aa19.29■□□□□ 0.68
TRIM23-202ENST00000274327 PDE3BQ13370 1112 aa19.29■□□□□ 0.68
TRIM23-202ENST00000274327 NUDCQ9Y266 331 aa19.29■□□□□ 0.68
TRIM23-202ENST00000274327 CCDC146Q8IYE0 955 aa19.28■□□□□ 0.68
TRIM23-202ENST00000274327 LRRC7Q96NW7 1537 aa19.28■□□□□ 0.68
TRIM23-202ENST00000274327 KIF1AQ12756 1690 aa19.27■□□□□ 0.68
TRIM23-202ENST00000274327 C1orf167Q5SNV9 1468 aa19.27■□□□□ 0.68
TRIM23-202ENST00000274327 ESCO1Q5FWF5 840 aa19.26■□□□□ 0.67
TRIM23-202ENST00000274327 SALL2Q9Y467 1007 aaPredicted RBP19.26■□□□□ 0.67
TRIM23-202ENST00000274327 EMILIN1Q9Y6C2 1016 aa19.26■□□□□ 0.67
TRIM23-202ENST00000274327 IQSEC2Q5JU85 1478 aa19.26■□□□□ 0.67
TRIM23-202ENST00000274327 DIAPH1O60610 1272 aaKnown RBP19.25■□□□□ 0.67
TRIM23-202ENST00000274327 ZNF521Q96K83 1311 aa19.25■□□□□ 0.67
TRIM23-202ENST00000274327 NGEFQ8N5V2 710 aa19.25■□□□□ 0.67
TRIM23-202ENST00000274327 RUNDC1Q96C34 613 aa19.25■□□□□ 0.67
TRIM23-202ENST00000274327 MST1RQ04912 1400 aa19.25■□□□□ 0.67
TRIM23-202ENST00000274327 APAF1O14727 1248 aa19.24■□□□□ 0.67
TRIM23-202ENST00000274327 PEAK1Q9H792 1746 aa19.23■□□□□ 0.67
TRIM23-202ENST00000274327 U2AF1L5P0DN76 240 aaPredicted RBP19.23■□□□□ 0.67
TRIM23-202ENST00000274327 U2AF1Q01081 240 aaKnown RBP eCLIP19.23■□□□□ 0.67
TRIM23-202ENST00000274327 RRS1Q15050 365 aaKnown RBP19.23■□□□□ 0.67
TRIM23-202ENST00000274327 ORAI2Q96SN7 254 aa19.23■□□□□ 0.67
TRIM23-202ENST00000274327 TRPM3Q9HCF6 1732 aaPredicted RBP19.21■□□□□ 0.67
TRIM23-202ENST00000274327 PPM1GO15355 546 aaPredicted RBP19.21■□□□□ 0.67
TRIM23-202ENST00000274327 ATF3P18847 181 aa19.21■□□□□ 0.67
TRIM23-202ENST00000274327 U2SURPO15042 1029 aaKnown RBP19.2■□□□□ 0.66
TRIM23-202ENST00000274327 IL13P35225 146 aa19.2■□□□□ 0.66
TRIM23-202ENST00000274327 NCBP3Q53F19 620 aaKnown RBP19.2■□□□□ 0.66
TRIM23-202ENST00000274327 ZNF335Q9H4Z2 1342 aaPredicted RBP19.19■□□□□ 0.66
TRIM23-202ENST00000274327 SUPT16HQ9Y5B9 1047 aaKnown RBP19.19■□□□□ 0.66
TRIM23-202ENST00000274327 MSH6P52701 1360 aa19.19■□□□□ 0.66
TRIM23-202ENST00000274327 NLRP6P59044 892 aa19.18■□□□□ 0.66
TRIM23-202ENST00000274327 PSME1Q06323 249 aa19.18■□□□□ 0.66
TRIM23-202ENST00000274327 CADPS2Q86UW7 1296 aa19.18■□□□□ 0.66
TRIM23-202ENST00000274327 CDCA7LQ96GN5 454 aa19.18■□□□□ 0.66
TRIM23-202ENST00000274327 PLEKHF1Q96S99 279 aa19.18■□□□□ 0.66
TRIM23-202ENST00000274327 ABTB2Q8N961 1025 aa19.18■□□□□ 0.66
TRIM23-202ENST00000274327 TCP11L2Q8N4U5 519 aa19.17■□□□□ 0.66
TRIM23-202ENST00000274327 PAK3O75914 559 aaPredicted RBP19.16■□□□□ 0.66
TRIM23-202ENST00000274327 PHF23Q9BUL5 403 aaPredicted RBP19.16■□□□□ 0.66
TRIM23-202ENST00000274327 DMRT2Q9Y5R5 561 aa19.16■□□□□ 0.66
TRIM23-202ENST00000274327 MAP3K19Q56UN5 1328 aa19.15■□□□□ 0.66
TRIM23-202ENST00000274327 SBNO1A3KN83 1393 aa19.15■□□□□ 0.66
TRIM23-202ENST00000274327 FOXO3O43524 673 aa19.15■□□□□ 0.66
TRIM23-202ENST00000274327 FCHSD2O94868 740 aa19.15■□□□□ 0.66
TRIM23-202ENST00000274327 PNNQ9H307 717 aaKnown RBP19.15■□□□□ 0.66
TRIM23-202ENST00000274327 GOLGA2Q08379 1002 aa19.14■□□□□ 0.65
TRIM23-202ENST00000274327 CCDC27Q2M243 656 aa19.14■□□□□ 0.65
TRIM23-202ENST00000274327 RGPD1P0DJD0 1748 aa19.14■□□□□ 0.65
TRIM23-202ENST00000274327 KIF24Q5T7B8 1368 aa19.14■□□□□ 0.65
TRIM23-202ENST00000274327 RSPH6AQ9H0K4 717 aa19.14■□□□□ 0.65
TRIM23-202ENST00000274327 ALS2Q96Q42 1657 aa19.13■□□□□ 0.65
TRIM23-202ENST00000274327 FLT4P35916 1363 aa19.13■□□□□ 0.65
TRIM23-202ENST00000274327 NFAT5O94916 1531 aa19.13■□□□□ 0.65
TRIM23-202ENST00000274327 NUTM2GQ5VZR2 741 aa19.13■□□□□ 0.65
TRIM23-202ENST00000274327 NEFLP07196 543 aa19.12■□□□□ 0.65
TRIM23-202ENST00000274327 SLFN5Q08AF3 891 aa19.12■□□□□ 0.65
TRIM23-202ENST00000274327 EIF4A2Q14240 407 aaKnown RBP19.12■□□□□ 0.65
TRIM23-202ENST00000274327 KRT28Q7Z3Y7 464 aa19.12■□□□□ 0.65
TRIM23-202ENST00000274327 WWC1Q8IX03 1113 aa19.12■□□□□ 0.65
TRIM23-202ENST00000274327 TRMT2AQ8IZ69 625 aaKnown RBP19.12■□□□□ 0.65
TRIM23-202ENST00000274327 RNF123Q5XPI4 1314 aa19.12■□□□□ 0.65
TRIM23-202ENST00000274327 SLIT3O75094 1523 aa19.12■□□□□ 0.65
TRIM23-202ENST00000274327 LTN1O94822 1766 aa19.11■□□□□ 0.65
TRIM23-202ENST00000274327 SOX12O15370 315 aa19.11■□□□□ 0.65
TRIM23-202ENST00000274327 DUSP27Q5VZP5 1158 aa19.11■□□□□ 0.65
TRIM23-202ENST00000274327 PHRF1Q9P1Y6 1649 aaKnown RBP19.1■□□□□ 0.65
TRIM23-202ENST00000274327 FKBP8Q14318 412 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms