RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 PDE3AQ14432 1141 aa24.53■■□□□ 1.52
CPNE7-201ENST00000268720 CCDC27Q2M243 656 aa24.53■■□□□ 1.52
CPNE7-201ENST00000268720 USP35Q9P2H5 1018 aa24.52■■□□□ 1.52
CPNE7-201ENST00000268720 PCDHB15Q9Y5E8 787 aa24.52■■□□□ 1.52
CPNE7-201ENST00000268720 AGLP35573 1532 aa24.52■■□□□ 1.52
CPNE7-201ENST00000268720 NFKBIBQ15653 356 aa24.51■■□□□ 1.51
CPNE7-201ENST00000268720 PLEKHF1Q96S99 279 aa24.5■■□□□ 1.51
CPNE7-201ENST00000268720 RIMS2Q9UQ26 1411 aa24.5■■□□□ 1.51
CPNE7-201ENST00000268720 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.49■■□□□ 1.51
CPNE7-201ENST00000268720 SPRYD3Q8NCJ5 442 aa24.49■■□□□ 1.51
CPNE7-201ENST00000268720 PPP6R1Q9UPN7 881 aa24.49■■□□□ 1.51
CPNE7-201ENST00000268720 REREQ9P2R6 1566 aa24.49■■□□□ 1.51
CPNE7-201ENST00000268720 HDGFL2Q7Z4V5 671 aaPredicted RBP24.49■■□□□ 1.51
CPNE7-201ENST00000268720 COL3A1P02461 1466 aaPredicted RBP24.49■■□□□ 1.51
CPNE7-201ENST00000268720 SPATA31D1Q6ZQQ2 1576 aa24.47■■□□□ 1.51
CPNE7-201ENST00000268720 FRAT2O75474 233 aaPredicted RBP24.47■■□□□ 1.51
CPNE7-201ENST00000268720 SLKQ9H2G2 1235 aaPredicted RBP24.47■■□□□ 1.51
CPNE7-201ENST00000268720 ADGRB2O60241 1585 aa24.46■■□□□ 1.51
CPNE7-201ENST00000268720 TMPOP42166 694 aaKnown RBP24.45■■□□□ 1.5
CPNE7-201ENST00000268720 TRIM35Q9UPQ4 493 aa24.45■■□□□ 1.5
CPNE7-201ENST00000268720 MYH16Q9H6N6 1097 aa24.44■■□□□ 1.5
CPNE7-201ENST00000268720 METP08581 1390 aa24.42■■□□□ 1.5
CPNE7-201ENST00000268720 MED14O60244 1454 aa24.42■■□□□ 1.5
CPNE7-201ENST00000268720 TXNDC2Q86VQ3 553 aa24.42■■□□□ 1.5
CPNE7-201ENST00000268720 BRPF3Q9ULD4 1205 aa24.42■■□□□ 1.5
CPNE7-201ENST00000268720 DIAPH1O60610 1272 aaKnown RBP24.41■■□□□ 1.5
CPNE7-201ENST00000268720 ARXQ96QS3 562 aa24.41■■□□□ 1.5
CPNE7-201ENST00000268720 ZMYM3Q14202 1370 aa24.41■■□□□ 1.5
CPNE7-201ENST00000268720 NCKAP5LQ9HCH0 1330 aa24.4■■□□□ 1.5
CPNE7-201ENST00000268720 MAPK8IP3Q9UPT6 1336 aa24.4■■□□□ 1.5
CPNE7-201ENST00000268720 SETD1AO15047 1707 aaKnown RBP24.4■■□□□ 1.5
CPNE7-201ENST00000268720 ANKRD26Q9UPS8 1709 aa24.4■■□□□ 1.5
CPNE7-201ENST00000268720 EXOSC9Q06265 439 aaKnown RBP24.39■■□□□ 1.49
CPNE7-201ENST00000268720 NCBP3Q53F19 620 aaKnown RBP24.39■■□□□ 1.49
CPNE7-201ENST00000268720 PNPLA6Q8IY17 1366 aa24.39■■□□□ 1.49
CPNE7-201ENST00000268720 USP19O94966 1318 aa24.39■■□□□ 1.49
CPNE7-201ENST00000268720 POLKQ9UBT6 870 aa24.38■■□□□ 1.49
CPNE7-201ENST00000268720 RIPK4P57078 832 aa24.38■■□□□ 1.49
CPNE7-201ENST00000268720 ESF1Q9H501 851 aaKnown RBP24.38■■□□□ 1.49
CPNE7-201ENST00000268720 GSE1Q14687 1217 aa24.37■■□□□ 1.49
CPNE7-201ENST00000268720 PDZRN3Q9UPQ7 1066 aa24.37■■□□□ 1.49
CPNE7-201ENST00000268720 DLC1Q96QB1 1528 aa24.37■■□□□ 1.49
CPNE7-201ENST00000268720 ZRANB1Q9UGI0 708 aa24.36■■□□□ 1.49
CPNE7-201ENST00000268720 NRXN3Q9Y4C0 1643 aa24.36■■□□□ 1.49
CPNE7-201ENST00000268720 WASLO00401 505 aaPredicted RBP24.35■■□□□ 1.49
CPNE7-201ENST00000268720 THUMPD2Q9BTF0 503 aaKnown RBP24.35■■□□□ 1.49
CPNE7-201ENST00000268720 FTSJ3Q8IY81 847 aaKnown RBP24.34■■□□□ 1.49
CPNE7-201ENST00000268720 SMC4Q9NTJ3 1288 aa24.34■■□□□ 1.49
CPNE7-201ENST00000268720 NME9Q86XW9 330 aa24.34■■□□□ 1.49
CPNE7-201ENST00000268720 EMILIN1Q9Y6C2 1016 aa24.33■■□□□ 1.49
CPNE7-201ENST00000268720 KIF20BQ96Q89 1820 aa24.33■■□□□ 1.49
CPNE7-201ENST00000268720 KIF13AQ9H1H9 1805 aa24.32■■□□□ 1.48
CPNE7-201ENST00000268720 ELL2O00472 640 aaPredicted RBP24.32■■□□□ 1.48
CPNE7-201ENST00000268720 PPIP5K1Q6PFW1 1433 aa24.32■■□□□ 1.48
CPNE7-201ENST00000268720 ATP7BP35670 1465 aa24.32■■□□□ 1.48
CPNE7-201ENST00000268720 ITPRIPQ8IWB1 547 aa24.31■■□□□ 1.48
CPNE7-201ENST00000268720 SSH1Q8WYL5 1049 aa24.31■■□□□ 1.48
CPNE7-201ENST00000268720 HMOX1P09601 288 aa24.31■■□□□ 1.48
CPNE7-201ENST00000268720 PRKAR2BP31323 418 aa24.31■■□□□ 1.48
CPNE7-201ENST00000268720 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.3■■□□□ 1.48
CPNE7-201ENST00000268720 ZKSCAN2Q63HK3 967 aa24.29■■□□□ 1.48
CPNE7-201ENST00000268720 NUDT16Q96DE0 195 aaKnown RBP24.29■■□□□ 1.48
CPNE7-201ENST00000268720 RSPH6AQ9H0K4 717 aa24.29■■□□□ 1.48
CPNE7-201ENST00000268720 CPSF1Q10570 1443 aaKnown RBP24.29■■□□□ 1.48
CPNE7-201ENST00000268720 PHACTR3Q96KR7 559 aa24.29■■□□□ 1.48
CPNE7-201ENST00000268720 FCHSD2O94868 740 aa24.28■■□□□ 1.48
CPNE7-201ENST00000268720 LRRC7Q96NW7 1537 aa24.28■■□□□ 1.48
CPNE7-201ENST00000268720 TRIM27P14373 513 aa24.28■■□□□ 1.48
CPNE7-201ENST00000268720 MVPQ14764 893 aaKnown RBP24.28■■□□□ 1.48
CPNE7-201ENST00000268720 DZIP1LQ8IYY4 767 aaKnown RBP24.28■■□□□ 1.48
CPNE7-201ENST00000268720 ANO8Q9HCE9 1232 aaPredicted RBP24.27■■□□□ 1.48
CPNE7-201ENST00000268720 PMFBP1Q8TBY8 1022 aa24.26■■□□□ 1.47
CPNE7-201ENST00000268720 MAP2P11137 1827 aaKnown RBP24.26■■□□□ 1.47
CPNE7-201ENST00000268720 NOB1Q9ULX3 412 aaKnown RBP24.26■■□□□ 1.47
CPNE7-201ENST00000268720 CT47B1P0C2W7 299 aaPredicted RBP24.25■■□□□ 1.47
CPNE7-201ENST00000268720 TNRQ92752 1358 aa24.25■■□□□ 1.47
CPNE7-201ENST00000268720 RRS1Q15050 365 aaKnown RBP24.25■■□□□ 1.47
CPNE7-201ENST00000268720 CCDC61Q9Y6R9 512 aa24.25■■□□□ 1.47
CPNE7-201ENST00000268720 EDC4Q6P2E9 1401 aaKnown RBP24.24■■□□□ 1.47
CPNE7-201ENST00000268720 C1orf115Q9H7X2 142 aa24.24■■□□□ 1.47
CPNE7-201ENST00000268720 IL16Q14005 1332 aa24.24■■□□□ 1.47
CPNE7-201ENST00000268720 MFAP1P55081 439 aaKnown RBP24.24■■□□□ 1.47
CPNE7-201ENST00000268720 PRR36Q9H6K5 1346 aa24.24■■□□□ 1.47
CPNE7-201ENST00000268720 FAM135BQ49AJ0 1406 aa24.23■■□□□ 1.47
CPNE7-201ENST00000268720 CPS1P31327 1500 aa24.22■■□□□ 1.47
CPNE7-201ENST00000268720 PNNQ9H307 717 aaKnown RBP24.22■■□□□ 1.47
CPNE7-201ENST00000268720 NUTM2FA1L443 756 aa24.22■■□□□ 1.47
CPNE7-201ENST00000268720 TMEM2Q9UHN6 1383 aa24.22■■□□□ 1.47
CPNE7-201ENST00000268720 AAMPQ13685 434 aa24.21■■□□□ 1.47
CPNE7-201ENST00000268720 ROBO2Q9HCK4 1378 aa24.21■■□□□ 1.47
CPNE7-201ENST00000268720 IL13P35225 146 aa24.21■■□□□ 1.47
CPNE7-201ENST00000268720 CEBPAP49715 358 aaPredicted RBP24.21■■□□□ 1.47
CPNE7-201ENST00000268720 ATF7IPQ6VMQ6 1270 aa24.21■■□□□ 1.47
CPNE7-201ENST00000268720 CDC42BPGQ6DT37 1551 aa24.21■■□□□ 1.47
CPNE7-201ENST00000268720 TMEM57Q8N5G2 664 aa24.2■■□□□ 1.47
CPNE7-201ENST00000268720 LTKP29376 864 aa24.19■■□□□ 1.46
CPNE7-201ENST00000268720 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.19■■□□□ 1.46
CPNE7-201ENST00000268720 HDGFP51858 240 aaKnown RBP24.19■■□□□ 1.46
CPNE7-201ENST00000268720 TECPR2O15040 1411 aa24.18■■□□□ 1.46
CPNE7-201ENST00000268720 COG3Q96JB2 828 aa24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms