RNA–Protein interactions for RNA: ENST00000266880.11

CHFR-201, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 11,133 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-201ENST00000266880 TMCO3Q6UWJ1 677 aa13.26□□□□□ -0.29
CHFR-201ENST00000266880 DZIP1LQ8IYY4 767 aaKnown RBP13.26□□□□□ -0.29
CHFR-201ENST00000266880 CWC22Q9HCG8 908 aaKnown RBP13.25□□□□□ -0.29
CHFR-201ENST00000266880 CCDC192P0DO97 292 aa13.25□□□□□ -0.29
CHFR-201ENST00000266880 CCDC91Q7Z6B0 441 aa13.25□□□□□ -0.29
CHFR-201ENST00000266880 TDO2P48775 406 aa13.25□□□□□ -0.29
CHFR-201ENST00000266880 ROCK1Q13464 1354 aa13.25□□□□□ -0.29
CHFR-201ENST00000266880 NUTM2DQ5VT03 806 aaPredicted RBP13.25□□□□□ -0.29
CHFR-201ENST00000266880 CALCOCO1Q9P1Z2 691 aa13.24□□□□□ -0.29
CHFR-201ENST00000266880 STK38Q15208 465 aa13.24□□□□□ -0.29
CHFR-201ENST00000266880 PDCL3Q9H2J4 239 aa13.24□□□□□ -0.29
CHFR-201ENST00000266880 TMCO5BA8MYB1 307 aa13.24□□□□□ -0.29
CHFR-201ENST00000266880 ZNF396Q96N95 335 aaPredicted RBP13.24□□□□□ -0.29
CHFR-201ENST00000266880 MAP2K1Q02750 393 aaPredicted RBP13.24□□□□□ -0.29
CHFR-201ENST00000266880 KRT18P05783 430 aaKnown RBP13.24□□□□□ -0.29
CHFR-201ENST00000266880 CNPY4Q8N129 248 aa13.24□□□□□ -0.29
CHFR-201ENST00000266880 PANK1Q8TE04 598 aa13.23□□□□□ -0.29
CHFR-201ENST00000266880 GTF2F1P35269 517 aaKnown RBP eCLIP13.23□□□□□ -0.29
CHFR-201ENST00000266880 ESPNB1AK53 854 aa13.23□□□□□ -0.29
CHFR-201ENST00000266880 KIF27Q86VH2 1401 aa13.23□□□□□ -0.29
CHFR-201ENST00000266880 CCDC113Q9H0I3 377 aa13.23□□□□□ -0.29
CHFR-201ENST00000266880 PANK3Q9H999 370 aa13.23□□□□□ -0.29
CHFR-201ENST00000266880 C1orf141Q5JVX7 400 aa13.22□□□□□ -0.29
CHFR-201ENST00000266880 ERC2O15083 957 aa13.22□□□□□ -0.29
CHFR-201ENST00000266880 KIAA1328Q86T90 577 aa13.22□□□□□ -0.29
CHFR-201ENST00000266880 WASHC4Q2M389 1173 aa13.22□□□□□ -0.29
CHFR-201ENST00000266880 MPHOSPH10O00566 681 aaKnown RBP13.22□□□□□ -0.29
CHFR-201ENST00000266880 TXLNAP40222 546 aa13.22□□□□□ -0.29
CHFR-201ENST00000266880 FHAD1B1AJZ9 1412 aa13.22□□□□□ -0.29
CHFR-201ENST00000266880 LUC7LQ9NQ29 371 aaKnown RBP13.21□□□□□ -0.29
CHFR-201ENST00000266880 SPATA24Q86W54 205 aa13.21□□□□□ -0.29
CHFR-201ENST00000266880 NGDNQ8NEJ9 315 aaKnown RBP13.21□□□□□ -0.3
CHFR-201ENST00000266880 MPHOSPH9Q99550 1183 aa13.21□□□□□ -0.3
CHFR-201ENST00000266880 CRACR2AQ9BSW2 395 aa13.21□□□□□ -0.3
CHFR-201ENST00000266880 MRVI1Q9Y6F6 885 aa13.2□□□□□ -0.3
CHFR-201ENST00000266880 XBP1P17861 261 aa13.2□□□□□ -0.3
CHFR-201ENST00000266880 UBXN4Q92575 508 aa13.2□□□□□ -0.3
CHFR-201ENST00000266880 SRRTQ9BXP5 876 aaKnown RBP13.2□□□□□ -0.3
CHFR-201ENST00000266880 PSMA5P28066 241 aa13.2□□□□□ -0.3
CHFR-201ENST00000266880 STIM1Q13586 685 aa13.2□□□□□ -0.3
CHFR-201ENST00000266880 PUS7Q96PZ0 661 aaKnown RBP13.2□□□□□ -0.3
CHFR-201ENST00000266880 NUP155O75694 1391 aa13.2□□□□□ -0.3
CHFR-201ENST00000266880 TANGO6Q9C0B7 1094 aa13.19□□□□□ -0.3
CHFR-201ENST00000266880 CBFA2T2O43439 604 aa13.19□□□□□ -0.3
CHFR-201ENST00000266880 TXLNBQ8N3L3 684 aa13.19□□□□□ -0.3
CHFR-201ENST00000266880 ME1P48163 572 aa13.19□□□□□ -0.3
CHFR-201ENST00000266880 NEK4P51957 841 aa13.19□□□□□ -0.3
CHFR-201ENST00000266880 UBE4AQ14139 1066 aa13.19□□□□□ -0.3
CHFR-201ENST00000266880 ZHX3Q9H4I2 956 aa13.19□□□□□ -0.3
CHFR-201ENST00000266880 CCDC97Q96F63 343 aaPredicted RBP13.19□□□□□ -0.3
CHFR-201ENST00000266880 NUTM2FA1L443 756 aa13.18□□□□□ -0.3
CHFR-201ENST00000266880 PIP4K2AP48426 406 aaPredicted RBP13.18□□□□□ -0.3
CHFR-201ENST00000266880 GGT6Q6P531 493 aa13.18□□□□□ -0.3
CHFR-201ENST00000266880 FSD1Q9BTV5 496 aa13.18□□□□□ -0.3
CHFR-201ENST00000266880 PPP4R3BQ5MIZ7 849 aa13.18□□□□□ -0.3
CHFR-201ENST00000266880 ARID4AP29374 1257 aaPredicted RBP13.18□□□□□ -0.3
CHFR-201ENST00000266880 CCDC148Q8NFR7 591 aa13.18□□□□□ -0.3
CHFR-201ENST00000266880 TAF4BQ92750 862 aa13.18□□□□□ -0.3
CHFR-201ENST00000266880 APAF1O14727 1248 aa13.18□□□□□ -0.3
CHFR-201ENST00000266880 PDCP20941 246 aa13.18□□□□□ -0.3
CHFR-201ENST00000266880 SPDYE4A6NLX3 237 aa13.17□□□□□ -0.3
CHFR-201ENST00000266880 CNTROBQ8N137 903 aa13.17□□□□□ -0.3
CHFR-201ENST00000266880 IKQ13123 557 aaPredicted RBP13.17□□□□□ -0.3
CHFR-201ENST00000266880 GOPCQ9HD26 462 aa13.17□□□□□ -0.3
CHFR-201ENST00000266880 MNAT1P51948 309 aa13.17□□□□□ -0.3
CHFR-201ENST00000266880 STK3Q13188 491 aa13.17□□□□□ -0.3
CHFR-201ENST00000266880 API5Q9BZZ5 524 aaKnown RBP13.17□□□□□ -0.3
CHFR-201ENST00000266880 SERPINA10Q9UK55 444 aa13.17□□□□□ -0.3
CHFR-201ENST00000266880 SARNPP82979 210 aaKnown RBP13.17□□□□□ -0.3
CHFR-201ENST00000266880 SUDS3Q9H7L9 328 aaPredicted RBP13.17□□□□□ -0.3
CHFR-201ENST00000266880 NEUROD6Q96NK8 337 aa13.17□□□□□ -0.3
CHFR-201ENST00000266880 DHX8Q14562 1220 aaKnown RBP13.16□□□□□ -0.3
CHFR-201ENST00000266880 TMX1Q9H3N1 280 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 MSH5O43196 834 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 MICALCLQ6ZW33 695 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 GOLIM4O00461 696 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 EPB41L2O43491 1005 aaKnown RBP13.16□□□□□ -0.3
CHFR-201ENST00000266880 IFFO1Q0D2I5 559 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
CHFR-201ENST00000266880 CASQ1P31415 396 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 TIGD1Q96MW7 591 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 TTC5Q8N0Z6 440 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 XPCQ01831 940 aaPredicted RBP13.16□□□□□ -0.3
CHFR-201ENST00000266880 FAM107BQ9H098 131 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 WRNQ14191 1432 aaPredicted RBP eCLIP13.16□□□□□ -0.31e-6■■■■■ 52.5
CHFR-201ENST00000266880 RAI14Q9P0K7 980 aa13.16□□□□□ -0.3
CHFR-201ENST00000266880 MAP9Q49MG5 647 aa13.15□□□□□ -0.3
CHFR-201ENST00000266880 FILIP1Q7Z7B0 1213 aa13.15□□□□□ -0.3
CHFR-201ENST00000266880 SETSIPP0DME0 302 aa13.15□□□□□ -0.3
CHFR-201ENST00000266880 HSP90AB4PQ58FF6 505 aa13.15□□□□□ -0.3
CHFR-201ENST00000266880 STAMBPO95630 424 aa13.15□□□□□ -0.3
CHFR-201ENST00000266880 RBM28Q9NW13 759 aaKnown RBP13.15□□□□□ -0.3
CHFR-201ENST00000266880 JAKMIP3Q5VZ66 844 aa13.15□□□□□ -0.31
CHFR-201ENST00000266880 L3MBTL2Q969R5 705 aa13.14□□□□□ -0.31
CHFR-201ENST00000266880 ARHGAP29Q52LW3 1261 aa13.14□□□□□ -0.31
CHFR-201ENST00000266880 TEFQ10587 303 aa13.14□□□□□ -0.31
CHFR-201ENST00000266880 SART3Q15020 963 aaKnown RBP13.14□□□□□ -0.31
CHFR-201ENST00000266880 ATP2C2O75185 946 aa13.13□□□□□ -0.31
CHFR-201ENST00000266880 DACH1Q9UI36 760 aa13.13□□□□□ -0.31
CHFR-201ENST00000266880 SYCE3A1L190 88 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms