RNA–Protein interactions for RNA: ENST00000266589.10

SCAF11-201, Transcript of SR-related CTD associated factor 11, humanhuman

APPRIS ALT2 TSL 5

Gene SCAF11, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-201ENST00000266589 PDE3BQ13370 1112 aa15.35■□□□□ 0.05
SCAF11-201ENST00000266589 COL3A1P02461 1466 aaPredicted RBP15.34■□□□□ 0.05
SCAF11-201ENST00000266589 USP6P35125 1406 aa15.34■□□□□ 0.05
SCAF11-201ENST00000266589 MAP2P11137 1827 aaKnown RBP15.33■□□□□ 0.05
SCAF11-201ENST00000266589 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
SCAF11-201ENST00000266589 PMFBP1Q8TBY8 1022 aa15.32■□□□□ 0.04
SCAF11-201ENST00000266589 ADGRL3Q9HAR2 1447 aa15.32■□□□□ 0.04
SCAF11-201ENST00000266589 TTC21BQ7Z4L5 1316 aa15.31■□□□□ 0.04
SCAF11-201ENST00000266589 RBM33Q96EV2 1170 aaKnown RBP15.31■□□□□ 0.04
SCAF11-201ENST00000266589 COG3Q96JB2 828 aa15.31■□□□□ 0.04
SCAF11-201ENST00000266589 APAF1O14727 1248 aa15.31■□□□□ 0.04
SCAF11-201ENST00000266589 KDM4FA0A1W2PPD8 638 aa15.3■□□□□ 0.04
SCAF11-201ENST00000266589 CDCA7LQ96GN5 454 aa15.3■□□□□ 0.04
SCAF11-201ENST00000266589 SSH2Q76I76 1423 aa15.29■□□□□ 0.04
SCAF11-201ENST00000266589 FBLN1P23142 703 aa15.29■□□□□ 0.04
SCAF11-201ENST00000266589 NGDNQ8NEJ9 315 aaKnown RBP15.29■□□□□ 0.04
SCAF11-201ENST00000266589 PNPLA6Q8IY17 1366 aa15.29■□□□□ 0.04
SCAF11-201ENST00000266589 POLKQ9UBT6 870 aa15.29■□□□□ 0.04
SCAF11-201ENST00000266589 AATKQ6ZMQ8 1374 aa15.29■□□□□ 0.04
SCAF11-201ENST00000266589 IQSEC2Q5JU85 1478 aa15.29■□□□□ 0.04
SCAF11-201ENST00000266589 ZNF521Q96K83 1311 aa15.28■□□□□ 0.04
SCAF11-201ENST00000266589 U2AF1L5P0DN76 240 aaPredicted RBP15.28■□□□□ 0.04
SCAF11-201ENST00000266589 U2AF1Q01081 240 aaKnown RBP eCLIP15.28■□□□□ 0.04
SCAF11-201ENST00000266589 RUNDC1Q96C34 613 aa15.28■□□□□ 0.04
SCAF11-201ENST00000266589 OVOS2A0A0J9YW53 1432 aa15.28■□□□□ 0.04
SCAF11-201ENST00000266589 OVOS2Q6IE36 1432 aa15.28■□□□□ 0.04
SCAF11-201ENST00000266589 PPM1GO15355 546 aaPredicted RBP15.27■□□□□ 0.03
SCAF11-201ENST00000266589 IRX6P78412 446 aaPredicted RBP15.27■□□□□ 0.03
SCAF11-201ENST00000266589 TTC21AQ8NDW8 1320 aa15.27■□□□□ 0.03
SCAF11-201ENST00000266589 CDK12Q9NYV4 1490 aaPredicted RBP15.27■□□□□ 0.03
SCAF11-201ENST00000266589 U2SURPO15042 1029 aaKnown RBP15.26■□□□□ 0.03
SCAF11-201ENST00000266589 DIAPH1O60610 1272 aaKnown RBP15.26■□□□□ 0.03
SCAF11-201ENST00000266589 HSPA2P54652 639 aa15.26■□□□□ 0.03
SCAF11-201ENST00000266589 C14orf37Q86TY3 774 aa15.26■□□□□ 0.03
SCAF11-201ENST00000266589 PIK3C2AO00443 1686 aa15.26■□□□□ 0.03
SCAF11-201ENST00000266589 NGEFQ8N5V2 710 aa15.26■□□□□ 0.03
SCAF11-201ENST00000266589 EMILIN1Q9Y6C2 1016 aa15.26■□□□□ 0.03
SCAF11-201ENST00000266589 LMTK3Q96Q04 1460 aa15.25■□□□□ 0.03
SCAF11-201ENST00000266589 GOLGA2Q08379 1002 aa15.24■□□□□ 0.03
SCAF11-201ENST00000266589 STRCP1A6NGW2 1772 aa15.24■□□□□ 0.03
SCAF11-201ENST00000266589 PROSER2Q86WR7 435 aaPredicted RBP15.24■□□□□ 0.03
SCAF11-201ENST00000266589 RRS1Q15050 365 aaKnown RBP15.23■□□□□ 0.03
SCAF11-201ENST00000266589 TCP11L2Q8N4U5 519 aa15.23■□□□□ 0.03
SCAF11-201ENST00000266589 PHF8Q9UPP1 1060 aa15.23■□□□□ 0.03
SCAF11-201ENST00000266589 RNF123Q5XPI4 1314 aa15.23■□□□□ 0.03
SCAF11-201ENST00000266589 RCAN3Q9UKA8 241 aa15.22■□□□□ 0.03
SCAF11-201ENST00000266589 USP31Q70CQ4 1352 aa15.22■□□□□ 0.03
SCAF11-201ENST00000266589 NEUROD2Q15784 382 aa15.21■□□□□ 0.03
SCAF11-201ENST00000266589 RRP7AQ9Y3A4 280 aaKnown RBP15.21■□□□□ 0.03
SCAF11-201ENST00000266589 LRRC7Q96NW7 1537 aa15.21■□□□□ 0.02
SCAF11-201ENST00000266589 USP54Q70EL1 1684 aa15.21■□□□□ 0.02
SCAF11-201ENST00000266589 MARF1Q9Y4F3 1742 aaKnown RBP15.21■□□□□ 0.02
SCAF11-201ENST00000266589 STRCQ7RTU9 1775 aa15.21■□□□□ 0.02
SCAF11-201ENST00000266589 SLFN5Q08AF3 891 aa15.2■□□□□ 0.02
SCAF11-201ENST00000266589 DUSP27Q5VZP5 1158 aa15.2■□□□□ 0.02
SCAF11-201ENST00000266589 WWC1Q8IX03 1113 aa15.2■□□□□ 0.02
SCAF11-201ENST00000266589 PLEKHF1Q96S99 279 aa15.2■□□□□ 0.02
SCAF11-201ENST00000266589 PEAK1Q9H792 1746 aa15.2■□□□□ 0.02
SCAF11-201ENST00000266589 ESCO1Q5FWF5 840 aa15.2■□□□□ 0.02
SCAF11-201ENST00000266589 MAPK8IP3Q9UPT6 1336 aa15.19■□□□□ 0.02
SCAF11-201ENST00000266589 IL13P35225 146 aa15.18■□□□□ 0.02
SCAF11-201ENST00000266589 ERICH6BQ5W0A0 696 aa15.18■□□□□ 0.02
SCAF11-201ENST00000266589 PNNQ9H307 717 aaKnown RBP15.18■□□□□ 0.02
SCAF11-201ENST00000266589 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
SCAF11-201ENST00000266589 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
SCAF11-201ENST00000266589 E9PSI1 815 aa15.17■□□□□ 0.02
SCAF11-201ENST00000266589 SOX12O15370 315 aa15.17■□□□□ 0.02
SCAF11-201ENST00000266589 PAK3O75914 559 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-201ENST00000266589 CCDC27Q2M243 656 aa15.17■□□□□ 0.02
SCAF11-201ENST00000266589 TRMT2AQ8IZ69 625 aaKnown RBP15.17■□□□□ 0.02
SCAF11-201ENST00000266589 PHF23Q9BUL5 403 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-201ENST00000266589 TMEM94Q12767 1356 aa15.17■□□□□ 0.02
SCAF11-201ENST00000266589 FCHSD2O94868 740 aa15.16■□□□□ 0.02
SCAF11-201ENST00000266589 NLRP6P59044 892 aa15.16■□□□□ 0.02
SCAF11-201ENST00000266589 NCBP3Q53F19 620 aaKnown RBP15.16■□□□□ 0.02
SCAF11-201ENST00000266589 C19orf44Q9H6X5 657 aa15.16■□□□□ 0.02
SCAF11-201ENST00000266589 KIF1AQ12756 1690 aa15.16■□□□□ 0.02
SCAF11-201ENST00000266589 RRP1P56182 461 aaKnown RBP15.16■□□□□ 0.02
SCAF11-201ENST00000266589 RSPH6AQ9H0K4 717 aa15.16■□□□□ 0.02
SCAF11-201ENST00000266589 ABTB2Q8N961 1025 aa15.15■□□□□ 0.02
SCAF11-201ENST00000266589 C1orf167Q5SNV9 1468 aa15.15■□□□□ 0.02
SCAF11-201ENST00000266589 HMOX1P09601 288 aa15.15■□□□□ 0.02
SCAF11-201ENST00000266589 TMPOP42166 694 aaKnown RBP15.15■□□□□ 0.02
SCAF11-201ENST00000266589 PSME1Q06323 249 aa15.15■□□□□ 0.02
SCAF11-201ENST00000266589 NUTM2GQ5VZR2 741 aa15.15■□□□□ 0.02
SCAF11-201ENST00000266589 ORAI2Q96SN7 254 aa15.15■□□□□ 0.02
SCAF11-201ENST00000266589 NCOA3Q9Y6Q9 1424 aa15.15■□□□□ 0.02
SCAF11-201ENST00000266589 PRKAR2BP31323 418 aa15.14■□□□□ 0.01
SCAF11-201ENST00000266589 WDR63Q8IWG1 891 aa15.14■□□□□ 0.01
SCAF11-201ENST00000266589 MAP3K19Q56UN5 1328 aa15.14■□□□□ 0.01
SCAF11-201ENST00000266589 DCCP43146 1447 aa15.14■□□□□ 0.01
SCAF11-201ENST00000266589 NEFMP07197 916 aa15.13■□□□□ 0.01
SCAF11-201ENST00000266589 EIF4A2Q14240 407 aaKnown RBP15.13■□□□□ 0.01
SCAF11-201ENST00000266589 SBNO1A3KN83 1393 aa15.13■□□□□ 0.01
SCAF11-201ENST00000266589 XIRP1Q702N8 1843 aaKnown RBP15.12■□□□□ 0.01
SCAF11-201ENST00000266589 FLT4P35916 1363 aa15.12■□□□□ 0.01
SCAF11-201ENST00000266589 RGPD1P0DJD0 1748 aa15.12■□□□□ 0.01
SCAF11-201ENST00000266589 MST1RQ04912 1400 aa15.12■□□□□ 0.01
SCAF11-201ENST00000266589 ATF3P18847 181 aa15.12■□□□□ 0.01
SCAF11-201ENST00000266589 HSP90AB2PQ58FF8 381 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms