RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 TPM4P67936 248 aa18.82■□□□□ 0.6
TIMP3-201ENST00000266085 VPS37DQ86XT2 251 aa18.82■□□□□ 0.6
TIMP3-201ENST00000266085 ERC2O15083 957 aa18.82■□□□□ 0.6
TIMP3-201ENST00000266085 RASSF8Q8NHQ8 419 aa18.82■□□□□ 0.6
TIMP3-201ENST00000266085 APPP05067 770 aa18.81■□□□□ 0.6
TIMP3-201ENST00000266085 CPLX2Q6PUV4 134 aaKnown RBP18.81■□□□□ 0.6
TIMP3-201ENST00000266085 NME9Q86XW9 330 aa18.81■□□□□ 0.6
TIMP3-201ENST00000266085 C14orf93Q9H972 538 aaKnown RBP18.81■□□□□ 0.6
TIMP3-201ENST00000266085 RNF20Q5VTR2 975 aa18.8■□□□□ 0.6
TIMP3-201ENST00000266085 C1orf115Q9H7X2 142 aa18.8■□□□□ 0.6
TIMP3-201ENST00000266085 NUTM2BA6NNL0 878 aaPredicted RBP18.8■□□□□ 0.6
TIMP3-201ENST00000266085 NUTM2EB1AL46 878 aaPredicted RBP18.8■□□□□ 0.6
TIMP3-201ENST00000266085 CLSTN1O94985 981 aa18.8■□□□□ 0.6
TIMP3-201ENST00000266085 FOXD4L6Q3SYB3 417 aaPredicted RBP18.8■□□□□ 0.6
TIMP3-201ENST00000266085 FOXD4L3Q6VB84 417 aaPredicted RBP18.8■□□□□ 0.6
TIMP3-201ENST00000266085 NUTM2AQ8IVF1 878 aaPredicted RBP18.8■□□□□ 0.6
TIMP3-201ENST00000266085 WASLO00401 505 aaPredicted RBP18.8■□□□□ 0.6
TIMP3-201ENST00000266085 TMPOP42166 694 aaKnown RBP18.8■□□□□ 0.6
TIMP3-201ENST00000266085 FOXO3O43524 673 aa18.79■□□□□ 0.6
TIMP3-201ENST00000266085 CLASRPQ8N2M8 674 aaKnown RBP18.79■□□□□ 0.6
TIMP3-201ENST00000266085 WWC1Q8IX03 1113 aa18.79■□□□□ 0.6
TIMP3-201ENST00000266085 CT47B1P0C2W7 299 aaPredicted RBP18.78■□□□□ 0.6
TIMP3-201ENST00000266085 C22orf23Q9BZE7 217 aa18.78■□□□□ 0.6
TIMP3-201ENST00000266085 CABP4P57796 275 aa18.78■□□□□ 0.6
TIMP3-201ENST00000266085 FAM177BA6PVY3 158 aa18.78■□□□□ 0.6
TIMP3-201ENST00000266085 NFE2L2Q16236 605 aa18.78■□□□□ 0.6
TIMP3-201ENST00000266085 SYNE3Q6ZMZ3 975 aa18.78■□□□□ 0.6
TIMP3-201ENST00000266085 ATF7IPQ6VMQ6 1270 aa18.78■□□□□ 0.6
TIMP3-201ENST00000266085 SPG7Q9UQ90 795 aa18.78■□□□□ 0.6
TIMP3-201ENST00000266085 UGGT2Q9NYU1 1516 aa18.78■□□□□ 0.6
TIMP3-201ENST00000266085 KDM5BQ9UGL1 1544 aa18.78■□□□□ 0.6
TIMP3-201ENST00000266085 THUMPD2Q9BTF0 503 aaKnown RBP18.77■□□□□ 0.6
TIMP3-201ENST00000266085 AKAP17AQ02040 695 aaKnown RBP18.77■□□□□ 0.59
TIMP3-201ENST00000266085 SKOR2Q2VWA4 1001 aaPredicted RBP18.77■□□□□ 0.59
TIMP3-201ENST00000266085 KCNH5Q8NCM2 988 aa18.76■□□□□ 0.59
TIMP3-201ENST00000266085 PHF8Q9UPP1 1060 aa18.76■□□□□ 0.59
TIMP3-201ENST00000266085 CHMP5Q9NZZ3 219 aa18.76■□□□□ 0.59
TIMP3-201ENST00000266085 CDC45O75419 566 aa18.75■□□□□ 0.59
TIMP3-201ENST00000266085 PDZRN3Q9UPQ7 1066 aa18.75■□□□□ 0.59
TIMP3-201ENST00000266085 NOL10Q9BSC4 688 aaKnown RBP18.75■□□□□ 0.59
TIMP3-201ENST00000266085 EMILIN1Q9Y6C2 1016 aa18.75■□□□□ 0.59
TIMP3-201ENST00000266085 GNAI2P04899 355 aa18.75■□□□□ 0.59
TIMP3-201ENST00000266085 TRDNQ13061 729 aa18.75■□□□□ 0.59
TIMP3-201ENST00000266085 FAM135AQ9P2D6 1515 aa18.74■□□□□ 0.59
TIMP3-201ENST00000266085 SCAF11Q99590 1463 aaKnown RBP18.74■□□□□ 0.59
TIMP3-201ENST00000266085 CPLX1O14810 134 aa18.73■□□□□ 0.59
TIMP3-201ENST00000266085 SLFN5Q08AF3 891 aa18.73■□□□□ 0.59
TIMP3-201ENST00000266085 MCTP1Q6DN14 999 aa18.73■□□□□ 0.59
TIMP3-201ENST00000266085 ZNF428Q96B54 188 aa18.73■□□□□ 0.59
TIMP3-201ENST00000266085 TRAPPC8Q9Y2L5 1435 aa18.73■□□□□ 0.59
TIMP3-201ENST00000266085 SRCIN1Q9C0H9 1055 aa18.72■□□□□ 0.59
TIMP3-201ENST00000266085 ADAMTS12P58397 1594 aa18.72■□□□□ 0.59
TIMP3-201ENST00000266085 PIP4K2BP78356 416 aa18.72■□□□□ 0.59
TIMP3-201ENST00000266085 MARCH6O60337 910 aa18.71■□□□□ 0.59
TIMP3-201ENST00000266085 CCT4P50991 539 aaKnown RBP18.71■□□□□ 0.59
TIMP3-201ENST00000266085 AMOTL1Q8IY63 956 aa18.71■□□□□ 0.59
TIMP3-201ENST00000266085 GCC1Q96CN9 775 aa18.71■□□□□ 0.59
TIMP3-201ENST00000266085 SYCP2Q9BX26 1530 aa18.71■□□□□ 0.59
TIMP3-201ENST00000266085 DCTN1Q14203 1278 aa18.71■□□□□ 0.59
TIMP3-201ENST00000266085 WASHC4Q2M389 1173 aa18.71■□□□□ 0.59
TIMP3-201ENST00000266085 KIF6Q6ZMV9 814 aa18.7■□□□□ 0.58
TIMP3-201ENST00000266085 A2MP01023 1474 aa18.7■□□□□ 0.58
TIMP3-201ENST00000266085 WDR7Q9Y4E6 1490 aa18.7■□□□□ 0.58
TIMP3-201ENST00000266085 MYL6BP14649 208 aa18.7■□□□□ 0.58
TIMP3-201ENST00000266085 MCM10Q7L590 875 aa18.7■□□□□ 0.58
TIMP3-201ENST00000266085 MIS18AQ9NYP9 233 aa18.7■□□□□ 0.58
TIMP3-201ENST00000266085 MVPQ14764 893 aaKnown RBP18.7■□□□□ 0.58
TIMP3-201ENST00000266085 BTBD11A6QL63 1104 aa18.69■□□□□ 0.58
TIMP3-201ENST00000266085 GSE1Q14687 1217 aa18.69■□□□□ 0.58
TIMP3-201ENST00000266085 GNAT3A8MTJ3 354 aa18.69■□□□□ 0.58
TIMP3-201ENST00000266085 NINLQ9Y2I6 1382 aa18.69■□□□□ 0.58
TIMP3-201ENST00000266085 KIAA0556O60303 1618 aa18.69■□□□□ 0.58
TIMP3-201ENST00000266085 TNRQ92752 1358 aa18.68■□□□□ 0.58
TIMP3-201ENST00000266085 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
TIMP3-201ENST00000266085 NUCB2P80303 420 aa18.68■□□□□ 0.58
TIMP3-201ENST00000266085 FSD1Q9BTV5 496 aa18.68■□□□□ 0.58
TIMP3-201ENST00000266085 FBXW7Q969H0 707 aa18.68■□□□□ 0.58
TIMP3-201ENST00000266085 TRIM29Q14134 588 aa18.67■□□□□ 0.58
TIMP3-201ENST00000266085 CNTROBQ8N137 903 aa18.67■□□□□ 0.58
TIMP3-201ENST00000266085 SMC3Q9UQE7 1217 aa18.67■□□□□ 0.58
TIMP3-201ENST00000266085 USHBP1Q8N6Y0 703 aa18.67■□□□□ 0.58
TIMP3-201ENST00000266085 ZNF518AQ6AHZ1 1483 aa18.66■□□□□ 0.58
TIMP3-201ENST00000266085 CREBRFQ8IUR6 639 aa18.66■□□□□ 0.58
TIMP3-201ENST00000266085 RAD21O60216 631 aa18.66■□□□□ 0.58
TIMP3-201ENST00000266085 VPS37CA5D8V6 355 aaPredicted RBP18.66■□□□□ 0.58
TIMP3-201ENST00000266085 DUOX2Q9NRD8 1548 aa18.65■□□□□ 0.58
TIMP3-201ENST00000266085 RALYLQ86SE5 291 aaKnown RBP18.65■□□□□ 0.58
TIMP3-201ENST00000266085 BECN2A8MW95 431 aa18.65■□□□□ 0.58
TIMP3-201ENST00000266085 VPS53Q5VIR6 699 aa18.65■□□□□ 0.58
TIMP3-201ENST00000266085 AMER1Q5JTC6 1135 aaPredicted RBP18.64■□□□□ 0.58
TIMP3-201ENST00000266085 GOLGA6L19H0YKK7 550 aa18.64■□□□□ 0.57
TIMP3-201ENST00000266085 DUSP27Q5VZP5 1158 aa18.64■□□□□ 0.57
TIMP3-201ENST00000266085 DNAJC2Q99543 621 aaKnown RBP18.63■□□□□ 0.57
TIMP3-201ENST00000266085 SIL1Q9H173 461 aa18.63■□□□□ 0.57
TIMP3-201ENST00000266085 KIF21AQ7Z4S6 1674 aa18.63■□□□□ 0.57
TIMP3-201ENST00000266085 CTTNBP2Q8WZ74 1663 aa18.63■□□□□ 0.57
TIMP3-201ENST00000266085 WDR62O43379 1518 aa18.63■□□□□ 0.57
TIMP3-201ENST00000266085 EIF4G3O43432 1585 aaKnown RBP18.63■□□□□ 0.57
TIMP3-201ENST00000266085 NUP160Q12769 1436 aa18.63■□□□□ 0.57
TIMP3-201ENST00000266085 ERC1Q8IUD2 1116 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms