RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 SOX12O15370 315 aa16.68■□□□□ 0.26
PRPF6-201ENST00000266079 NALCNQ8IZF0 1738 aa16.68■□□□□ 0.26
PRPF6-201ENST00000266079 IL27Q8NEV9 243 aa16.67■□□□□ 0.26
PRPF6-201ENST00000266079 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
PRPF6-201ENST00000266079 CD163L1Q9NR16 1453 aa16.67■□□□□ 0.26
PRPF6-201ENST00000266079 NUTM2GQ5VZR2 741 aa16.67■□□□□ 0.26
PRPF6-201ENST00000266079 DDX17Q92841 729 aaKnown RBP16.67■□□□□ 0.26
PRPF6-201ENST00000266079 FOXO3O43524 673 aa16.67■□□□□ 0.26
PRPF6-201ENST00000266079 MORC1Q86VD1 984 aa16.67■□□□□ 0.26
PRPF6-201ENST00000266079 NME9Q86XW9 330 aa16.67■□□□□ 0.26
PRPF6-201ENST00000266079 CCDC136Q96JN2 1154 aa16.67■□□□□ 0.26
PRPF6-201ENST00000266079 CGNL1Q0VF96 1302 aa16.67■□□□□ 0.26
PRPF6-201ENST00000266079 RGPD8O14715 1765 aaPredicted RBP16.65■□□□□ 0.26
PRPF6-201ENST00000266079 RNF123Q5XPI4 1314 aa16.65■□□□□ 0.26
PRPF6-201ENST00000266079 PHF8Q9UPP1 1060 aa16.65■□□□□ 0.26
PRPF6-201ENST00000266079 NKTRP30414 1462 aaKnown RBP16.65■□□□□ 0.26
PRPF6-201ENST00000266079 FYB1O15117 783 aa16.64■□□□□ 0.26
PRPF6-201ENST00000266079 NWD1Q149M9 1564 aa16.64■□□□□ 0.25
PRPF6-201ENST00000266079 RALBP1Q15311 655 aa16.64■□□□□ 0.25
PRPF6-201ENST00000266079 LMOD2Q6P5Q4 547 aa16.64■□□□□ 0.25
PRPF6-201ENST00000266079 NINLQ9Y2I6 1382 aa16.63■□□□□ 0.25
PRPF6-201ENST00000266079 ADGRB2O60241 1585 aa16.63■□□□□ 0.25
PRPF6-201ENST00000266079 MSH6P52701 1360 aa16.63■□□□□ 0.25
PRPF6-201ENST00000266079 PLEKHG3A1L390 1219 aa16.62■□□□□ 0.25
PRPF6-201ENST00000266079 MYBBP1AQ9BQG0 1328 aaKnown RBP16.62■□□□□ 0.25
PRPF6-201ENST00000266079 PARD3Q8TEW0 1356 aa16.62■□□□□ 0.25
PRPF6-201ENST00000266079 USP32Q8NFA0 1604 aa16.62■□□□□ 0.25
PRPF6-201ENST00000266079 NUDCQ9Y266 331 aa16.62■□□□□ 0.25
PRPF6-201ENST00000266079 LRRC7Q96NW7 1537 aa16.61■□□□□ 0.25
PRPF6-201ENST00000266079 PPM1GO15355 546 aaPredicted RBP16.61■□□□□ 0.25
PRPF6-201ENST00000266079 PPP2R1AP30153 589 aa16.61■□□□□ 0.25
PRPF6-201ENST00000266079 PSME1Q06323 249 aa16.61■□□□□ 0.25
PRPF6-201ENST00000266079 CADPS2Q86UW7 1296 aa16.6■□□□□ 0.25
PRPF6-201ENST00000266079 CPSF1Q10570 1443 aaKnown RBP16.6■□□□□ 0.25
PRPF6-201ENST00000266079 ZNF692Q9BU19 519 aaPredicted RBP16.59■□□□□ 0.25
PRPF6-201ENST00000266079 TTC21BQ7Z4L5 1316 aa16.59■□□□□ 0.25
PRPF6-201ENST00000266079 CDC42BPGQ6DT37 1551 aa16.59■□□□□ 0.25
PRPF6-201ENST00000266079 NLRP13Q86W25 1043 aa16.58■□□□□ 0.24
PRPF6-201ENST00000266079 USP35Q9P2H5 1018 aa16.58■□□□□ 0.24
PRPF6-201ENST00000266079 RTN4Q9NQC3 1192 aaKnown RBP16.58■□□□□ 0.24
PRPF6-201ENST00000266079 FMN2Q9NZ56 1722 aa16.57■□□□□ 0.24
PRPF6-201ENST00000266079 C1orf167Q5SNV9 1468 aa16.57■□□□□ 0.24
PRPF6-201ENST00000266079 USP6P35125 1406 aa16.56■□□□□ 0.24
PRPF6-201ENST00000266079 ANKARQ7Z5J8 1434 aa16.56■□□□□ 0.24
PRPF6-201ENST00000266079 ABTB2Q8N961 1025 aa16.56■□□□□ 0.24
PRPF6-201ENST00000266079 COG3Q96JB2 828 aa16.56■□□□□ 0.24
PRPF6-201ENST00000266079 SLAIN2Q9P270 581 aa16.56■□□□□ 0.24
PRPF6-201ENST00000266079 EDC4Q6P2E9 1401 aaKnown RBP16.56■□□□□ 0.24
PRPF6-201ENST00000266079 NLRP6P59044 892 aa16.55■□□□□ 0.24
PRPF6-201ENST00000266079 MTHFSP49914 203 aa16.55■□□□□ 0.24
PRPF6-201ENST00000266079 RRS1Q15050 365 aaKnown RBP16.55■□□□□ 0.24
PRPF6-201ENST00000266079 MST1RQ04912 1400 aa16.54■□□□□ 0.24
PRPF6-201ENST00000266079 ZBTB7CA1YPR0 619 aa16.54■□□□□ 0.24
PRPF6-201ENST00000266079 NEFMP07197 916 aa16.53■□□□□ 0.24
PRPF6-201ENST00000266079 KRT28Q7Z3Y7 464 aa16.53■□□□□ 0.24
PRPF6-201ENST00000266079 POLR3AO14802 1390 aaPredicted RBP16.52■□□□□ 0.24
PRPF6-201ENST00000266079 NPC1L1Q9UHC9 1359 aa16.52■□□□□ 0.24
PRPF6-201ENST00000266079 TOPAZ1Q8N9V7 1692 aa16.52■□□□□ 0.24
PRPF6-201ENST00000266079 XIRP1Q702N8 1843 aaKnown RBP16.52■□□□□ 0.24
PRPF6-201ENST00000266079 BRINP3Q76B58 766 aa16.52■□□□□ 0.23
PRPF6-201ENST00000266079 EMILIN1Q9Y6C2 1016 aa16.52■□□□□ 0.23
PRPF6-201ENST00000266079 ITSN1Q15811 1721 aa16.52■□□□□ 0.23
PRPF6-201ENST00000266079 PIP4K2BP78356 416 aa16.51■□□□□ 0.23
PRPF6-201ENST00000266079 NPM2Q86SE8 214 aaKnown RBP16.5■□□□□ 0.23
PRPF6-201ENST00000266079 PNISRQ8TF01 805 aaKnown RBP16.5■□□□□ 0.23
PRPF6-201ENST00000266079 LAS1LQ9Y4W2 734 aaKnown RBP16.5■□□□□ 0.23
PRPF6-201ENST00000266079 BRD4O60885 1362 aaPredicted RBP16.49■□□□□ 0.23
PRPF6-201ENST00000266079 TCERG1O14776 1098 aaKnown RBP16.49■□□□□ 0.23
PRPF6-201ENST00000266079 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.48■□□□□ 0.23
PRPF6-201ENST00000266079 NSD2O96028 1365 aa16.48■□□□□ 0.23
PRPF6-201ENST00000266079 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
PRPF6-201ENST00000266079 CABLES1Q8TDN4 633 aa16.47■□□□□ 0.23
PRPF6-201ENST00000266079 AKAP12Q02952 1782 aa16.47■□□□□ 0.23
PRPF6-201ENST00000266079 DCCP43146 1447 aa16.47■□□□□ 0.23
PRPF6-201ENST00000266079 MON2Q7Z3U7 1717 aa16.47■□□□□ 0.23
PRPF6-201ENST00000266079 POLKQ9UBT6 870 aa16.47■□□□□ 0.23
PRPF6-201ENST00000266079 WDR43Q15061 677 aaKnown RBP eCLIP16.46■□□□□ 0.23
PRPF6-201ENST00000266079 SSH2Q76I76 1423 aa16.46■□□□□ 0.23
PRPF6-201ENST00000266079 PDE4AP27815 886 aa16.45■□□□□ 0.22
PRPF6-201ENST00000266079 ADAMTS8Q9UP79 889 aa16.45■□□□□ 0.22
PRPF6-201ENST00000266079 TTC21AQ8NDW8 1320 aa16.45■□□□□ 0.22
PRPF6-201ENST00000266079 U2SURPO15042 1029 aaKnown RBP16.45■□□□□ 0.22
PRPF6-201ENST00000266079 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
PRPF6-201ENST00000266079 UBE2Q2Q8WVN8 375 aa16.45■□□□□ 0.22
PRPF6-201ENST00000266079 NPHP3Q7Z494 1330 aa16.45■□□□□ 0.22
PRPF6-201ENST00000266079 LTBP4Q8N2S1 1624 aa16.45■□□□□ 0.22
PRPF6-201ENST00000266079 KIF20BQ96Q89 1820 aa16.43■□□□□ 0.22
PRPF6-201ENST00000266079 CFAP53Q96M91 514 aa16.43■□□□□ 0.22
PRPF6-201ENST00000266079 BACH2Q9BYV9 841 aa16.43■□□□□ 0.22
PRPF6-201ENST00000266079 UBAP1LF5GYI3 381 aa16.43■□□□□ 0.22
PRPF6-201ENST00000266079 MS4A1P11836 297 aa16.42■□□□□ 0.22
PRPF6-201ENST00000266079 ZC3H6P61129 1189 aaKnown RBP16.41■□□□□ 0.22
PRPF6-201ENST00000266079 LTV1Q96GA3 475 aaPredicted RBP16.41■□□□□ 0.22
PRPF6-201ENST00000266079 OVOS2A0A0J9YW53 1432 aa16.41■□□□□ 0.22
PRPF6-201ENST00000266079 OVOS2Q6IE36 1432 aa16.41■□□□□ 0.22
PRPF6-201ENST00000266079 U2AF1L5P0DN76 240 aaPredicted RBP16.41■□□□□ 0.22
PRPF6-201ENST00000266079 U2AF1Q01081 240 aaKnown RBP eCLIP16.41■□□□□ 0.22
PRPF6-201ENST00000266079 NRKQ7Z2Y5 1582 aa16.41■□□□□ 0.22
PRPF6-201ENST00000266079 MAP3K19Q56UN5 1328 aa16.41■□□□□ 0.22
PRPF6-201ENST00000266079 AMPHP49418 695 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms