RNA–Protein interactions for RNA: ENST00000265806.10

R3HCC1-201, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-201ENST00000265806 CFAP53Q96M91 514 aa32.66■■■□□ 2.82
R3HCC1-201ENST00000265806 STRCP1A6NGW2 1772 aa32.66■■■□□ 2.82
R3HCC1-201ENST00000265806 NCOA3Q9Y6Q9 1424 aa32.66■■■□□ 2.82
R3HCC1-201ENST00000265806 C14orf37Q86TY3 774 aa32.65■■■□□ 2.82
R3HCC1-201ENST00000265806 NGDNQ8NEJ9 315 aaKnown RBP32.65■■■□□ 2.82
R3HCC1-201ENST00000265806 TTC21AQ8NDW8 1320 aa32.62■■■□□ 2.81
R3HCC1-201ENST00000265806 SHPRHQ149N8 1683 aa32.62■■■□□ 2.81
R3HCC1-201ENST00000265806 COG3Q96JB2 828 aa32.62■■■□□ 2.81
R3HCC1-201ENST00000265806 AATKQ6ZMQ8 1374 aa32.6■■■□□ 2.81
R3HCC1-201ENST00000265806 C19orf44Q9H6X5 657 aa32.6■■■□□ 2.81
R3HCC1-201ENST00000265806 PHF8Q9UPP1 1060 aa32.58■■■□□ 2.81
R3HCC1-201ENST00000265806 TMEM94Q12767 1356 aa32.58■■■□□ 2.81
R3HCC1-201ENST00000265806 ZRANB1Q9UGI0 708 aa32.58■■■□□ 2.81
R3HCC1-201ENST00000265806 OVOS2A0A0J9YW53 1432 aa32.57■■■□□ 2.8
R3HCC1-201ENST00000265806 OVOS2Q6IE36 1432 aa32.57■■■□□ 2.8
R3HCC1-201ENST00000265806 PNPLA6Q8IY17 1366 aa32.56■■■□□ 2.8
R3HCC1-201ENST00000265806 COL3A1P02461 1466 aaPredicted RBP32.55■■■□□ 2.8
R3HCC1-201ENST00000265806 DCCP43146 1447 aa32.55■■■□□ 2.8
R3HCC1-201ENST00000265806 SMG6Q86US8 1419 aaKnown RBP32.53■■■□□ 2.8
R3HCC1-201ENST00000265806 POLKQ9UBT6 870 aa32.53■■■□□ 2.8
R3HCC1-201ENST00000265806 MAP2P11137 1827 aaKnown RBP32.52■■■□□ 2.8
R3HCC1-201ENST00000265806 USP31Q70CQ4 1352 aa32.51■■■□□ 2.79
R3HCC1-201ENST00000265806 ESCO1Q5FWF5 840 aa32.5■■■□□ 2.79
R3HCC1-201ENST00000265806 GTF3C3Q9Y5Q9 886 aa32.5■■■□□ 2.79
R3HCC1-201ENST00000265806 C1orf167Q5SNV9 1468 aa32.47■■■□□ 2.79
R3HCC1-201ENST00000265806 PIK3C2AO00443 1686 aa32.46■■■□□ 2.79
R3HCC1-201ENST00000265806 SENP3-EIF4A1A0A087X0R7 540 aa32.46■■■□□ 2.79
R3HCC1-201ENST00000265806 FBLN1P23142 703 aa32.46■■■□□ 2.79
R3HCC1-201ENST00000265806 NUDCQ9Y266 331 aa32.46■■■□□ 2.79
R3HCC1-201ENST00000265806 CDK12Q9NYV4 1490 aaPredicted RBP32.46■■■□□ 2.79
R3HCC1-201ENST00000265806 ATF3P18847 181 aa32.45■■■□□ 2.78
R3HCC1-201ENST00000265806 USP54Q70EL1 1684 aa32.44■■■□□ 2.78
R3HCC1-201ENST00000265806 DMRT2Q9Y5R5 561 aa32.43■■■□□ 2.78
R3HCC1-201ENST00000265806 DIAPH1O60610 1272 aaKnown RBP32.42■■■□□ 2.78
R3HCC1-201ENST00000265806 PDE3BQ13370 1112 aa32.42■■■□□ 2.78
R3HCC1-201ENST00000265806 ORAI2Q96SN7 254 aa32.42■■■□□ 2.78
R3HCC1-201ENST00000265806 EMILIN1Q9Y6C2 1016 aa32.42■■■□□ 2.78
R3HCC1-201ENST00000265806 MST1RQ04912 1400 aa32.42■■■□□ 2.78
R3HCC1-201ENST00000265806 KIF1AQ12756 1690 aa32.42■■■□□ 2.78
R3HCC1-201ENST00000265806 CCDC146Q8IYE0 955 aa32.42■■■□□ 2.78
R3HCC1-201ENST00000265806 XIRP1Q702N8 1843 aaKnown RBP32.41■■■□□ 2.78
R3HCC1-201ENST00000265806 CADPS2Q86UW7 1296 aa32.41■■■□□ 2.78
R3HCC1-201ENST00000265806 NGEFQ8N5V2 710 aa32.41■■■□□ 2.78
R3HCC1-201ENST00000265806 LRRC7Q96NW7 1537 aa32.41■■■□□ 2.78
R3HCC1-201ENST00000265806 MSH6P52701 1360 aa32.4■■■□□ 2.78
R3HCC1-201ENST00000265806 ZNF335Q9H4Z2 1342 aaPredicted RBP32.4■■■□□ 2.78
R3HCC1-201ENST00000265806 SALL2Q9Y467 1007 aaPredicted RBP32.4■■■□□ 2.78
R3HCC1-201ENST00000265806 PPM1GO15355 546 aaPredicted RBP32.38■■■□□ 2.77
R3HCC1-201ENST00000265806 U2AF1L5P0DN76 240 aaPredicted RBP32.38■■■□□ 2.77
R3HCC1-201ENST00000265806 U2AF1Q01081 240 aaKnown RBP eCLIP32.38■■■□□ 2.77
R3HCC1-201ENST00000265806 PSME1Q06323 249 aa32.38■■■□□ 2.77
R3HCC1-201ENST00000265806 RRS1Q15050 365 aaKnown RBP32.38■■■□□ 2.77
R3HCC1-201ENST00000265806 RUNDC1Q96C34 613 aa32.38■■■□□ 2.77
R3HCC1-201ENST00000265806 APAF1O14727 1248 aa32.36■■■□□ 2.77
R3HCC1-201ENST00000265806 NLRP6P59044 892 aa32.36■■■□□ 2.77
R3HCC1-201ENST00000265806 ABTB2Q8N961 1025 aa32.35■■■□□ 2.77
R3HCC1-201ENST00000265806 MARF1Q9Y4F3 1742 aaKnown RBP32.35■■■□□ 2.77
R3HCC1-201ENST00000265806 PAK3O75914 559 aaPredicted RBP32.34■■■□□ 2.77
R3HCC1-201ENST00000265806 ZNF521Q96K83 1311 aa32.33■■■□□ 2.77
R3HCC1-201ENST00000265806 U2SURPO15042 1029 aaKnown RBP32.33■■■□□ 2.77
R3HCC1-201ENST00000265806 FOXO3O43524 673 aa32.33■■■□□ 2.77
R3HCC1-201ENST00000265806 IQSEC2Q5JU85 1478 aa32.32■■■□□ 2.77
R3HCC1-201ENST00000265806 IL13P35225 146 aa32.3■■■□□ 2.76
R3HCC1-201ENST00000265806 NCBP3Q53F19 620 aaKnown RBP32.28■■■□□ 2.76
R3HCC1-201ENST00000265806 TRPM3Q9HCF6 1732 aaPredicted RBP32.27■■■□□ 2.76
R3HCC1-201ENST00000265806 PEAK1Q9H792 1746 aa32.27■■■□□ 2.76
R3HCC1-201ENST00000265806 PLEKHF1Q96S99 279 aa32.27■■■□□ 2.76
R3HCC1-201ENST00000265806 PNNQ9H307 717 aaKnown RBP32.27■■■□□ 2.76
R3HCC1-201ENST00000265806 TCP11L2Q8N4U5 519 aa32.26■■■□□ 2.75
R3HCC1-201ENST00000265806 MAP3K19Q56UN5 1328 aa32.26■■■□□ 2.75
R3HCC1-201ENST00000265806 FCHSD2O94868 740 aa32.25■■■□□ 2.75
R3HCC1-201ENST00000265806 NUTM2GQ5VZR2 741 aa32.24■■■□□ 2.75
R3HCC1-201ENST00000265806 KRT28Q7Z3Y7 464 aa32.24■■■□□ 2.75
R3HCC1-201ENST00000265806 SBNO1A3KN83 1393 aa32.24■■■□□ 2.75
R3HCC1-201ENST00000265806 KIF24Q5T7B8 1368 aa32.24■■■□□ 2.75
R3HCC1-201ENST00000265806 CDCA7LQ96GN5 454 aa32.23■■■□□ 2.75
R3HCC1-201ENST00000265806 FLT4P35916 1363 aa32.22■■■□□ 2.75
R3HCC1-201ENST00000265806 SOX12O15370 315 aa32.22■■■□□ 2.75
R3HCC1-201ENST00000265806 SUPT16HQ9Y5B9 1047 aaKnown RBP32.22■■■□□ 2.75
R3HCC1-201ENST00000265806 GOLGA2Q08379 1002 aa32.21■■■□□ 2.75
R3HCC1-201ENST00000265806 XPCQ01831 940 aaPredicted RBP32.2■■■□□ 2.75
R3HCC1-201ENST00000265806 PHF23Q9BUL5 403 aaPredicted RBP32.2■■■□□ 2.75
R3HCC1-201ENST00000265806 CCDC27Q2M243 656 aa32.19■■■□□ 2.74
R3HCC1-201ENST00000265806 RSPH6AQ9H0K4 717 aa32.19■■■□□ 2.74
R3HCC1-201ENST00000265806 NPHP3Q7Z494 1330 aa32.18■■■□□ 2.74
R3HCC1-201ENST00000265806 EIF4A2Q14240 407 aaKnown RBP32.18■■■□□ 2.74
R3HCC1-201ENST00000265806 HSP90AB2PQ58FF8 381 aa32.17■■■□□ 2.74
R3HCC1-201ENST00000265806 NFAT5O94916 1531 aa32.17■■■□□ 2.74
R3HCC1-201ENST00000265806 MAPK8IP3Q9UPT6 1336 aa32.17■■■□□ 2.74
R3HCC1-201ENST00000265806 WWC1Q8IX03 1113 aa32.17■■■□□ 2.74
R3HCC1-201ENST00000265806 KCNH5Q8NCM2 988 aa32.17■■■□□ 2.74
R3HCC1-201ENST00000265806 ALS2Q96Q42 1657 aa32.16■■■□□ 2.74
R3HCC1-201ENST00000265806 AMPHP49418 695 aa32.15■■■□□ 2.74
R3HCC1-201ENST00000265806 SLIT3O75094 1523 aa32.15■■■□□ 2.74
R3HCC1-201ENST00000265806 NEFLP07196 543 aa32.14■■■□□ 2.74
R3HCC1-201ENST00000265806 RRP7AQ9Y3A4 280 aaKnown RBP32.14■■■□□ 2.74
R3HCC1-201ENST00000265806 USP19O94966 1318 aa32.13■■■□□ 2.73
R3HCC1-201ENST00000265806 RTL1A6NKG5 1358 aa32.13■■■□□ 2.73
R3HCC1-201ENST00000265806 SLFN5Q08AF3 891 aa32.13■■■□□ 2.73
R3HCC1-201ENST00000265806 SLAIN2Q9P270 581 aa32.13■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms