RNA–Protein interactions for RNA: ENST00000263578.9

FOXRED1-201, Transcript of FAD dependent oxidoreductase domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FOXRED1, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXRED1-201ENST00000263578 ANKARQ7Z5J8 1434 aa20.77■□□□□ 0.92
FOXRED1-201ENST00000263578 MAP2P11137 1827 aaKnown RBP20.76■□□□□ 0.91
FOXRED1-201ENST00000263578 NME9Q86XW9 330 aa20.76■□□□□ 0.91
FOXRED1-201ENST00000263578 ACEP12821 1306 aa20.76■□□□□ 0.91
FOXRED1-201ENST00000263578 ZNF521Q96K83 1311 aa20.76■□□□□ 0.91
FOXRED1-201ENST00000263578 USP6P35125 1406 aa20.76■□□□□ 0.91
FOXRED1-201ENST00000263578 APAF1O14727 1248 aa20.76■□□□□ 0.91
FOXRED1-201ENST00000263578 NGEFQ8N5V2 710 aa20.76■□□□□ 0.91
FOXRED1-201ENST00000263578 CDCA7LQ96GN5 454 aa20.76■□□□□ 0.91
FOXRED1-201ENST00000263578 IQSEC2Q5JU85 1478 aa20.75■□□□□ 0.91
FOXRED1-201ENST00000263578 NWD1Q149M9 1564 aa20.74■□□□□ 0.91
FOXRED1-201ENST00000263578 PNPLA6Q8IY17 1366 aa20.74■□□□□ 0.91
FOXRED1-201ENST00000263578 RNF123Q5XPI4 1314 aa20.74■□□□□ 0.91
FOXRED1-201ENST00000263578 IRX6P78412 446 aaPredicted RBP20.74■□□□□ 0.91
FOXRED1-201ENST00000263578 RUNDC1Q96C34 613 aa20.72■□□□□ 0.91
FOXRED1-201ENST00000263578 COG3Q96JB2 828 aa20.72■□□□□ 0.91
FOXRED1-201ENST00000263578 AATKQ6ZMQ8 1374 aa20.72■□□□□ 0.91
FOXRED1-201ENST00000263578 TTC21BQ7Z4L5 1316 aa20.72■□□□□ 0.91
FOXRED1-201ENST00000263578 ERICH6BQ5W0A0 696 aa20.72■□□□□ 0.91
FOXRED1-201ENST00000263578 U2AF1L5P0DN76 240 aaPredicted RBP20.7■□□□□ 0.9
FOXRED1-201ENST00000263578 U2AF1Q01081 240 aaKnown RBP eCLIP20.7■□□□□ 0.9
FOXRED1-201ENST00000263578 CDK12Q9NYV4 1490 aaPredicted RBP20.7■□□□□ 0.9
FOXRED1-201ENST00000263578 GOLGA2Q08379 1002 aa20.7■□□□□ 0.9
FOXRED1-201ENST00000263578 POLKQ9UBT6 870 aa20.7■□□□□ 0.9
FOXRED1-201ENST00000263578 ZRANB1Q9UGI0 708 aa20.7■□□□□ 0.9
FOXRED1-201ENST00000263578 SSH2Q76I76 1423 aa20.7■□□□□ 0.9
FOXRED1-201ENST00000263578 ADGRL3Q9HAR2 1447 aa20.7■□□□□ 0.9
FOXRED1-201ENST00000263578 OVOS2A0A0J9YW53 1432 aa20.69■□□□□ 0.9
FOXRED1-201ENST00000263578 OVOS2Q6IE36 1432 aa20.69■□□□□ 0.9
FOXRED1-201ENST00000263578 RCAN3Q9UKA8 241 aa20.68■□□□□ 0.9
FOXRED1-201ENST00000263578 DIAPH1O60610 1272 aaKnown RBP20.67■□□□□ 0.9
FOXRED1-201ENST00000263578 PMFBP1Q8TBY8 1022 aa20.67■□□□□ 0.9
FOXRED1-201ENST00000263578 U2SURPO15042 1029 aaKnown RBP20.66■□□□□ 0.9
FOXRED1-201ENST00000263578 TTC21AQ8NDW8 1320 aa20.66■□□□□ 0.9
FOXRED1-201ENST00000263578 NGDNQ8NEJ9 315 aaKnown RBP20.66■□□□□ 0.9
FOXRED1-201ENST00000263578 FBLN1P23142 703 aa20.65■□□□□ 0.9
FOXRED1-201ENST00000263578 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
FOXRED1-201ENST00000263578 TCP11L2Q8N4U5 519 aa20.65■□□□□ 0.9
FOXRED1-201ENST00000263578 PPM1GO15355 546 aaPredicted RBP20.64■□□□□ 0.89
FOXRED1-201ENST00000263578 SLFN5Q08AF3 891 aa20.64■□□□□ 0.89
FOXRED1-201ENST00000263578 EMILIN1Q9Y6C2 1016 aa20.64■□□□□ 0.89
FOXRED1-201ENST00000263578 PIK3C2AO00443 1686 aa20.63■□□□□ 0.89
FOXRED1-201ENST00000263578 NCBP3Q53F19 620 aaKnown RBP20.62■□□□□ 0.89
FOXRED1-201ENST00000263578 RRP1P56182 461 aaKnown RBP20.61■□□□□ 0.89
FOXRED1-201ENST00000263578 WWC1Q8IX03 1113 aa20.61■□□□□ 0.89
FOXRED1-201ENST00000263578 LRRC7Q96NW7 1537 aa20.61■□□□□ 0.89
FOXRED1-201ENST00000263578 USP31Q70CQ4 1352 aa20.61■□□□□ 0.89
FOXRED1-201ENST00000263578 E9PSI1 815 aa20.61■□□□□ 0.89
FOXRED1-201ENST00000263578 TRMT2AQ8IZ69 625 aaKnown RBP20.61■□□□□ 0.89
FOXRED1-201ENST00000263578 RBM33Q96EV2 1170 aaKnown RBP20.61■□□□□ 0.89
FOXRED1-201ENST00000263578 PLEKHF1Q96S99 279 aa20.6■□□□□ 0.89
FOXRED1-201ENST00000263578 PHF23Q9BUL5 403 aaPredicted RBP20.6■□□□□ 0.89
FOXRED1-201ENST00000263578 RRP7AQ9Y3A4 280 aaKnown RBP20.6■□□□□ 0.89
FOXRED1-201ENST00000263578 USP54Q70EL1 1684 aa20.6■□□□□ 0.89
FOXRED1-201ENST00000263578 RRS1Q15050 365 aaKnown RBP20.59■□□□□ 0.89
FOXRED1-201ENST00000263578 CCDC27Q2M243 656 aa20.59■□□□□ 0.89
FOXRED1-201ENST00000263578 NEUROD2Q15784 382 aa20.59■□□□□ 0.89
FOXRED1-201ENST00000263578 PNNQ9H307 717 aaKnown RBP20.59■□□□□ 0.89
FOXRED1-201ENST00000263578 PPP4R2Q9NY27 417 aa20.59■□□□□ 0.89
FOXRED1-201ENST00000263578 MAPK8IP3Q9UPT6 1336 aa20.58■□□□□ 0.89
FOXRED1-201ENST00000263578 C14orf37Q86TY3 774 aa20.57■□□□□ 0.88
FOXRED1-201ENST00000263578 SPINK5Q9NQ38 1064 aaPredicted RBP20.57■□□□□ 0.88
FOXRED1-201ENST00000263578 PHF8Q9UPP1 1060 aa20.57■□□□□ 0.88
FOXRED1-201ENST00000263578 DMRT2Q9Y5R5 561 aa20.57■□□□□ 0.88
FOXRED1-201ENST00000263578 MARF1Q9Y4F3 1742 aaKnown RBP20.57■□□□□ 0.88
FOXRED1-201ENST00000263578 PEAK1Q9H792 1746 aa20.56■□□□□ 0.88
FOXRED1-201ENST00000263578 FCHSD2O94868 740 aa20.55■□□□□ 0.88
FOXRED1-201ENST00000263578 IL13P35225 146 aa20.55■□□□□ 0.88
FOXRED1-201ENST00000263578 WDR63Q8IWG1 891 aa20.55■□□□□ 0.88
FOXRED1-201ENST00000263578 STRCP1A6NGW2 1772 aa20.55■□□□□ 0.88
FOXRED1-201ENST00000263578 KDM4FA0A1W2PPD8 638 aa20.54■□□□□ 0.88
FOXRED1-201ENST00000263578 PROSER2Q86WR7 435 aaPredicted RBP20.54■□□□□ 0.88
FOXRED1-201ENST00000263578 RSPH6AQ9H0K4 717 aa20.54■□□□□ 0.88
FOXRED1-201ENST00000263578 LMTK3Q96Q04 1460 aa20.53■□□□□ 0.88
FOXRED1-201ENST00000263578 TMPOP42166 694 aaKnown RBP20.52■□□□□ 0.88
FOXRED1-201ENST00000263578 HSPA2P54652 639 aa20.52■□□□□ 0.87
FOXRED1-201ENST00000263578 PRKAR2BP31323 418 aa20.5■□□□□ 0.87
FOXRED1-201ENST00000263578 ESCO1Q5FWF5 840 aa20.5■□□□□ 0.87
FOXRED1-201ENST00000263578 NEFMP07197 916 aa20.5■□□□□ 0.87
FOXRED1-201ENST00000263578 KIF1AQ12756 1690 aa20.5■□□□□ 0.87
FOXRED1-201ENST00000263578 NLRP6P59044 892 aa20.49■□□□□ 0.87
FOXRED1-201ENST00000263578 RGPD1P0DJD0 1748 aa20.49■□□□□ 0.87
FOXRED1-201ENST00000263578 SOX12O15370 315 aa20.48■□□□□ 0.87
FOXRED1-201ENST00000263578 HMOX1P09601 288 aa20.48■□□□□ 0.87
FOXRED1-201ENST00000263578 SBNO1A3KN83 1393 aa20.48■□□□□ 0.87
FOXRED1-201ENST00000263578 STRCQ7RTU9 1775 aa20.48■□□□□ 0.87
FOXRED1-201ENST00000263578 MAP3K19Q56UN5 1328 aa20.48■□□□□ 0.87
FOXRED1-201ENST00000263578 FLT4P35916 1363 aa20.47■□□□□ 0.87
FOXRED1-201ENST00000263578 PAK3O75914 559 aaPredicted RBP20.47■□□□□ 0.87
FOXRED1-201ENST00000263578 EIF4A2Q14240 407 aaKnown RBP20.47■□□□□ 0.87
FOXRED1-201ENST00000263578 NCOA3Q9Y6Q9 1424 aa20.47■□□□□ 0.87
FOXRED1-201ENST00000263578 ABTB2Q8N961 1025 aa20.46■□□□□ 0.87
FOXRED1-201ENST00000263578 C19orf44Q9H6X5 657 aa20.46■□□□□ 0.87
FOXRED1-201ENST00000263578 TRIM35Q9UPQ4 493 aa20.46■□□□□ 0.87
FOXRED1-201ENST00000263578 DCCP43146 1447 aa20.46■□□□□ 0.87
FOXRED1-201ENST00000263578 RIPK4P57078 832 aa20.46■□□□□ 0.87
FOXRED1-201ENST00000263578 MYH16Q9H6N6 1097 aa20.46■□□□□ 0.87
FOXRED1-201ENST00000263578 TMEM94Q12767 1356 aa20.45■□□□□ 0.87
FOXRED1-201ENST00000263578 C1orf167Q5SNV9 1468 aa20.45■□□□□ 0.86
FOXRED1-201ENST00000263578 PSME1Q06323 249 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms